RNA–Protein interactions for RNA: ENST00000480030.1

PLD3-210, Transcript of phospholipase D family member 3, humanhuman

TSL 2

Gene PLD3, Length 903 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLD3-210ENST00000480030 NISCHQ9Y2I1 1504 aa23.49■■□□□ 1.35
PLD3-210ENST00000480030 ABCC9O60706 1549 aa21.8■■□□□ 1.08
PLD3-210ENST00000480030 CCDC180Q9P1Z9 1646 aa21.15■□□□□ 0.98
PLD3-210ENST00000480030 DNAJC5BQ9UF47 199 aa20.82■□□□□ 0.92
PLD3-210ENST00000480030 RB1CC1Q8TDY2 1594 aa20.38■□□□□ 0.85
PLD3-210ENST00000480030 DCAF8L2P0C7V8 631 aa20.32■□□□□ 0.84
PLD3-210ENST00000480030 PABPN1Q86U42 306 aaKnown RBP eCLIP20.32■□□□□ 0.84
PLD3-210ENST00000480030 NACADO15069 1562 aa20.09■□□□□ 0.81
PLD3-210ENST00000480030 UNC13AQ9UPW8 1703 aa19.99■□□□□ 0.79
PLD3-210ENST00000480030 BICRAQ9NZM4 1560 aa19.85■□□□□ 0.77
PLD3-210ENST00000480030 CECR2Q9BXF3 1484 aa19.6■□□□□ 0.73
PLD3-210ENST00000480030 CC2D2AQ9P2K1 1620 aa19.58■□□□□ 0.72
PLD3-210ENST00000480030 MYO15BQ96JP2 1530 aa19.54■□□□□ 0.72
PLD3-210ENST00000480030 SCRIBQ14160 1630 aa19.5■□□□□ 0.71
PLD3-210ENST00000480030 EIF4G1Q04637 1599 aaKnown RBP19.4■□□□□ 0.7
PLD3-210ENST00000480030 ZCCHC6Q5VYS8 1495 aaKnown RBP19.36■□□□□ 0.69
PLD3-210ENST00000480030 SHROOM4Q9ULL8 1493 aa19.29■□□□□ 0.68
PLD3-210ENST00000480030 DNAJC5Q9H3Z4 198 aa19.25■□□□□ 0.67
PLD3-210ENST00000480030 DCAF1Q9Y4B6 1507 aa19.2■□□□□ 0.66
PLD3-210ENST00000480030 ERCC6Q03468 1493 aa18.81■□□□□ 0.6
PLD3-210ENST00000480030 CUX2O14529 1486 aa18.72■□□□□ 0.59
PLD3-210ENST00000480030 NESP48681 1621 aa18.63■□□□□ 0.57
PLD3-210ENST00000480030 NCAPD3P42695 1498 aa18.57■□□□□ 0.56
PLD3-210ENST00000480030 ATAD2BQ9ULI0 1458 aa18.53■□□□□ 0.56
PLD3-210ENST00000480030 TRIM41Q8WV44 630 aa18.5■□□□□ 0.55
PLD3-210ENST00000480030 SMARCA4P51532 1647 aa18.43■□□□□ 0.54
PLD3-210ENST00000480030 SMARCA2P51531 1590 aa18.42■□□□□ 0.54
PLD3-210ENST00000480030 HMGXB3Q12766 1538 aa18.39■□□□□ 0.53
PLD3-210ENST00000480030 BAZ1BQ9UIG0 1483 aaKnown RBP18.38■□□□□ 0.53
PLD3-210ENST00000480030 THOC2Q8NI27 1593 aaKnown RBP18.37■□□□□ 0.53
PLD3-210ENST00000480030 KIF21AQ7Z4S6 1674 aa18.31■□□□□ 0.52
PLD3-210ENST00000480030 BAZ1AQ9NRL2 1556 aaPredicted RBP18.23■□□□□ 0.51
PLD3-210ENST00000480030 LAMC3Q9Y6N6 1575 aa18.21■□□□□ 0.51
PLD3-210ENST00000480030 MROH2BQ7Z745 1585 aa18.19■□□□□ 0.5
PLD3-210ENST00000480030 PDS5BQ9NTI5 1447 aa18.16■□□□□ 0.5
PLD3-210ENST00000480030 PEG3Q9GZU2 1588 aa18.11■□□□□ 0.49
PLD3-210ENST00000480030 MRC2Q9UBG0 1479 aa18.07■□□□□ 0.48
PLD3-210ENST00000480030 CADPSQ9ULU8 1353 aa18.04■□□□□ 0.48
PLD3-210ENST00000480030 WDR62O43379 1518 aa18■□□□□ 0.47
PLD3-210ENST00000480030 WIZO95785 1651 aa17.98■□□□□ 0.47
PLD3-210ENST00000480030 CEP164Q9UPV0 1460 aa17.94■□□□□ 0.46
PLD3-210ENST00000480030 OSCARQ8IYS5 282 aa17.92■□□□□ 0.46
PLD3-210ENST00000480030 FANCD2Q9BXW9 1451 aa17.9■□□□□ 0.46
PLD3-210ENST00000480030 URB2Q14146 1524 aaKnown RBP17.8■□□□□ 0.44
PLD3-210ENST00000480030 RIMBP3CA6NJZ7 1639 aa17.76■□□□□ 0.43
PLD3-210ENST00000480030 RIMBP3BA6NNM3 1639 aa17.76■□□□□ 0.43
PLD3-210ENST00000480030 RIMBP3Q9UFD9 1639 aa17.76■□□□□ 0.43
PLD3-210ENST00000480030 CFTRP13569 1480 aa17.73■□□□□ 0.43
PLD3-210ENST00000480030 ZNF608Q9ULD9 1512 aaPredicted RBP17.7■□□□□ 0.42
PLD3-210ENST00000480030 CYB5RLQ6IPT4 315 aa17.65■□□□□ 0.42
PLD3-210ENST00000480030 ARHGEF11O15085 1522 aa17.64■□□□□ 0.41
PLD3-210ENST00000480030 TRHP20396 242 aaPredicted RBP17.63■□□□□ 0.41
PLD3-210ENST00000480030 RSF1Q96T23 1441 aaPredicted RBP17.63■□□□□ 0.41
PLD3-210ENST00000480030 TOP2AP11388 1531 aaKnown RBP17.62■□□□□ 0.41
PLD3-210ENST00000480030 FBLN2P98095 1184 aa17.56■□□□□ 0.4
PLD3-210ENST00000480030 IFT140Q96RY7 1462 aa17.54■□□□□ 0.4
PLD3-210ENST00000480030 EIF4G3O43432 1585 aaKnown RBP17.51■□□□□ 0.39
PLD3-210ENST00000480030 TOPBP1Q92547 1522 aa17.51■□□□□ 0.39
PLD3-210ENST00000480030 AQRO60306 1485 aaKnown RBP eCLIP17.5■□□□□ 0.392e-8■■■■□ 19.7
PLD3-210ENST00000480030 PRDM2Q13029 1718 aa17.5■□□□□ 0.39
PLD3-210ENST00000480030 CHD1O14646 1710 aa17.49■□□□□ 0.39
PLD3-210ENST00000480030 CCDC88BA6NC98 1476 aa17.49■□□□□ 0.39
PLD3-210ENST00000480030 ARAP1Q96P48 1450 aa17.46■□□□□ 0.39
PLD3-210ENST00000480030 DNMBPQ6XZF7 1577 aa17.37■□□□□ 0.37
PLD3-210ENST00000480030 AEBP2Q6ZN18 517 aaPredicted RBP17.36■□□□□ 0.37
PLD3-210ENST00000480030 RAD54L2Q9Y4B4 1467 aa17.36■□□□□ 0.37
PLD3-210ENST00000480030 TARBP1Q13395 1621 aaKnown RBP17.35■□□□□ 0.37
PLD3-210ENST00000480030 TDRD9Q8NDG6 1382 aaKnown RBP17.34■□□□□ 0.37
PLD3-210ENST00000480030 POLA1P09884 1462 aaPredicted RBP17.31■□□□□ 0.36
PLD3-210ENST00000480030 ABCC8Q09428 1581 aa17.29■□□□□ 0.36
PLD3-210ENST00000480030 SNAPC4Q5SXM2 1469 aa17.27■□□□□ 0.36
PLD3-210ENST00000480030 SOGA1O94964 1423 aa17.24■□□□□ 0.35
PLD3-210ENST00000480030 CHMP7Q8WUX9 453 aaPredicted RBP17.24■□□□□ 0.35
PLD3-210ENST00000480030 CLASP1Q7Z460 1538 aa17.19■□□□□ 0.34
PLD3-210ENST00000480030 FGD5Q6ZNL6 1462 aa17.18■□□□□ 0.34
PLD3-210ENST00000480030 SYNJ1O43426 1573 aa17.14■□□□□ 0.33
PLD3-210ENST00000480030 GAPVD1Q14C86 1478 aa17.1■□□□□ 0.33
PLD3-210ENST00000480030 CUX1P39880 1505 aa17.1■□□□□ 0.33
PLD3-210ENST00000480030 GRIN2BQ13224 1484 aa17.08■□□□□ 0.32
PLD3-210ENST00000480030 MAGI1Q96QZ7 1491 aaPredicted RBP17.07■□□□□ 0.32
PLD3-210ENST00000480030 SYNJ2O15056 1496 aa17.06■□□□□ 0.32
PLD3-210ENST00000480030 ERCC6L2Q5T890 1561 aa17.05■□□□□ 0.32
PLD3-210ENST00000480030 PBRM1Q86U86 1689 aa17.03■□□□□ 0.32
PLD3-210ENST00000480030 WDR97A6NE52 1622 aa16.98■□□□□ 0.31
PLD3-210ENST00000480030 ABCA5Q8WWZ7 1642 aa16.89■□□□□ 0.29
PLD3-210ENST00000480030 CEP170Q5SW79 1584 aa16.89■□□□□ 0.29
PLD3-210ENST00000480030 GRIN2AQ12879 1464 aa16.88■□□□□ 0.29
PLD3-210ENST00000480030 ABCA10Q8WWZ4 1543 aa16.86■□□□□ 0.29
PLD3-210ENST00000480030 SUPT5HO00267 1087 aaKnown RBP16.86■□□□□ 0.29
PLD3-210ENST00000480030 ADAMTS12P58397 1594 aa16.83■□□□□ 0.28
PLD3-210ENST00000480030 KIF13AQ9H1H9 1805 aa16.81■□□□□ 0.28
PLD3-210ENST00000480030 NUP160Q12769 1436 aa16.79■□□□□ 0.28
PLD3-210ENST00000480030 PRG4Q92954 1404 aaPredicted RBP16.78■□□□□ 0.28
PLD3-210ENST00000480030 FAM69CQ0P6D2 419 aa16.77■□□□□ 0.28
PLD3-210ENST00000480030 WRNQ14191 1432 aaPredicted RBP eCLIP16.76■□□□□ 0.27
PLD3-210ENST00000480030 SHROOM2Q13796 1616 aa16.74■□□□□ 0.27
PLD3-210ENST00000480030 FHAD1B1AJZ9 1412 aa16.73■□□□□ 0.27
PLD3-210ENST00000480030 TTBK1Q5TCY1 1321 aaPredicted RBP16.72■□□□□ 0.27
PLD3-210ENST00000480030 JPH4Q96JJ6 628 aa16.7■□□□□ 0.26
PLD3-210ENST00000480030 KDM4FA0A1W2PPD8 638 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms