RNA–Protein interactions for RNA: ENST00000479943.5

ZNF561-214, Transcript of zinc finger protein 561, humanhuman

TSL 3

Gene ZNF561, Length 462 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF561-214ENST00000479943 NISCHQ9Y2I1 1504 aa15.71■□□□□ 0.11
ZNF561-214ENST00000479943 ABCC9O60706 1549 aa14.27□□□□□ -0.12
ZNF561-214ENST00000479943 CCDC180Q9P1Z9 1646 aa14.15□□□□□ -0.14
ZNF561-214ENST00000479943 DNAJC5BQ9UF47 199 aa13.57□□□□□ -0.24
ZNF561-214ENST00000479943 RB1CC1Q8TDY2 1594 aa13.5□□□□□ -0.25
ZNF561-214ENST00000479943 NACADO15069 1562 aa13.39□□□□□ -0.27
ZNF561-214ENST00000479943 UNC13AQ9UPW8 1703 aa13.27□□□□□ -0.29
ZNF561-214ENST00000479943 PABPN1Q86U42 306 aaKnown RBP eCLIP13.25□□□□□ -0.29
ZNF561-214ENST00000479943 BICRAQ9NZM4 1560 aa13.21□□□□□ -0.29
ZNF561-214ENST00000479943 MYO15BQ96JP2 1530 aa13.19□□□□□ -0.3
ZNF561-214ENST00000479943 DCAF8L2P0C7V8 631 aa13.18□□□□□ -0.3
ZNF561-214ENST00000479943 ZCCHC6Q5VYS8 1495 aaKnown RBP13.02□□□□□ -0.33
ZNF561-214ENST00000479943 DCAF1Q9Y4B6 1507 aa12.98□□□□□ -0.33
ZNF561-214ENST00000479943 SHROOM4Q9ULL8 1493 aa12.95□□□□□ -0.34
ZNF561-214ENST00000479943 CC2D2AQ9P2K1 1620 aa12.9□□□□□ -0.34
ZNF561-214ENST00000479943 SCRIBQ14160 1630 aa12.88□□□□□ -0.35
ZNF561-214ENST00000479943 CECR2Q9BXF3 1484 aa12.86□□□□□ -0.35
ZNF561-214ENST00000479943 EIF4G1Q04637 1599 aaKnown RBP12.85□□□□□ -0.35
ZNF561-214ENST00000479943 DNAJC5Q9H3Z4 198 aa12.49□□□□□ -0.41
ZNF561-214ENST00000479943 NCAPD3P42695 1498 aa12.4□□□□□ -0.43
ZNF561-214ENST00000479943 CUX2O14529 1486 aa12.35□□□□□ -0.43
ZNF561-214ENST00000479943 ATAD2BQ9ULI0 1458 aa12.34□□□□□ -0.43
ZNF561-214ENST00000479943 SMARCA4P51532 1647 aa12.29□□□□□ -0.44
ZNF561-214ENST00000479943 HMGXB3Q12766 1538 aa12.29□□□□□ -0.44
ZNF561-214ENST00000479943 ERCC6Q03468 1493 aa12.27□□□□□ -0.44
ZNF561-214ENST00000479943 NESP48681 1621 aa12.26□□□□□ -0.45
ZNF561-214ENST00000479943 SMARCA2P51531 1590 aa12.26□□□□□ -0.45
ZNF561-214ENST00000479943 PEG3Q9GZU2 1588 aa12.19□□□□□ -0.46
ZNF561-214ENST00000479943 THOC2Q8NI27 1593 aaKnown RBP12.18□□□□□ -0.46
ZNF561-214ENST00000479943 BAZ1AQ9NRL2 1556 aaPredicted RBP12.18□□□□□ -0.46
ZNF561-214ENST00000479943 BAZ1BQ9UIG0 1483 aaKnown RBP12.17□□□□□ -0.46
ZNF561-214ENST00000479943 MROH2BQ7Z745 1585 aa12.13□□□□□ -0.47
ZNF561-214ENST00000479943 LAMC3Q9Y6N6 1575 aa12.11□□□□□ -0.47
ZNF561-214ENST00000479943 KIF21AQ7Z4S6 1674 aa12.08□□□□□ -0.48
ZNF561-214ENST00000479943 PDS5BQ9NTI5 1447 aa12.01□□□□□ -0.49
ZNF561-214ENST00000479943 CADPSQ9ULU8 1353 aa11.98□□□□□ -0.49
ZNF561-214ENST00000479943 WIZO95785 1651 aa11.96□□□□□ -0.5
ZNF561-214ENST00000479943 WDR62O43379 1518 aa11.96□□□□□ -0.5
ZNF561-214ENST00000479943 MRC2Q9UBG0 1479 aa11.95□□□□□ -0.5
ZNF561-214ENST00000479943 CEP164Q9UPV0 1460 aa11.86□□□□□ -0.51
ZNF561-214ENST00000479943 FANCD2Q9BXW9 1451 aa11.85□□□□□ -0.51
ZNF561-214ENST00000479943 CFTRP13569 1480 aa11.84□□□□□ -0.51
ZNF561-214ENST00000479943 TRIM41Q8WV44 630 aa11.83□□□□□ -0.52
ZNF561-214ENST00000479943 RSF1Q96T23 1441 aaPredicted RBP11.82□□□□□ -0.52
ZNF561-214ENST00000479943 URB2Q14146 1524 aaKnown RBP11.81□□□□□ -0.52
ZNF561-214ENST00000479943 TOP2AP11388 1531 aaKnown RBP11.79□□□□□ -0.52
ZNF561-214ENST00000479943 OSCARQ8IYS5 282 aa11.7□□□□□ -0.54
ZNF561-214ENST00000479943 PRDM2Q13029 1718 aa11.69□□□□□ -0.54
ZNF561-214ENST00000479943 ZNF608Q9ULD9 1512 aaPredicted RBP11.67□□□□□ -0.54
ZNF561-214ENST00000479943 CCDC88BA6NC98 1476 aa11.65□□□□□ -0.54
ZNF561-214ENST00000479943 RIMBP3CA6NJZ7 1639 aa11.64□□□□□ -0.55
ZNF561-214ENST00000479943 RIMBP3BA6NNM3 1639 aa11.64□□□□□ -0.55
ZNF561-214ENST00000479943 RIMBP3Q9UFD9 1639 aa11.64□□□□□ -0.55
ZNF561-214ENST00000479943 IFT140Q96RY7 1462 aa11.63□□□□□ -0.55
ZNF561-214ENST00000479943 TOPBP1Q92547 1522 aa11.63□□□□□ -0.55
ZNF561-214ENST00000479943 ARHGEF11O15085 1522 aa11.6□□□□□ -0.55
ZNF561-214ENST00000479943 EIF4G3O43432 1585 aaKnown RBP11.58□□□□□ -0.55
ZNF561-214ENST00000479943 TARBP1Q13395 1621 aaKnown RBP11.57□□□□□ -0.56
ZNF561-214ENST00000479943 DNMBPQ6XZF7 1577 aa11.56□□□□□ -0.56
ZNF561-214ENST00000479943 ABCC8Q09428 1581 aa11.53□□□□□ -0.56
ZNF561-214ENST00000479943 AQRO60306 1485 aaKnown RBP eCLIP11.52□□□□□ -0.563e-6■■■■■ 29
ZNF561-214ENST00000479943 CHD1O14646 1710 aa11.52□□□□□ -0.57
ZNF561-214ENST00000479943 POLA1P09884 1462 aaPredicted RBP11.51□□□□□ -0.57
ZNF561-214ENST00000479943 ARAP1Q96P48 1450 aa11.5□□□□□ -0.57
ZNF561-214ENST00000479943 RAD54L2Q9Y4B4 1467 aa11.46□□□□□ -0.57
ZNF561-214ENST00000479943 CYB5RLQ6IPT4 315 aa11.45□□□□□ -0.58
ZNF561-214ENST00000479943 CLASP1Q7Z460 1538 aa11.42□□□□□ -0.58
ZNF561-214ENST00000479943 TDRD9Q8NDG6 1382 aaKnown RBP11.41□□□□□ -0.58
ZNF561-214ENST00000479943 SNAPC4Q5SXM2 1469 aa11.41□□□□□ -0.58
ZNF561-214ENST00000479943 CUX1P39880 1505 aa11.4□□□□□ -0.58
ZNF561-214ENST00000479943 FGD5Q6ZNL6 1462 aa11.4□□□□□ -0.58
ZNF561-214ENST00000479943 SOGA1O94964 1423 aa11.4□□□□□ -0.58
ZNF561-214ENST00000479943 WDR97A6NE52 1622 aa11.38□□□□□ -0.59
ZNF561-214ENST00000479943 FBLN2P98095 1184 aa11.37□□□□□ -0.59
ZNF561-214ENST00000479943 MAGI1Q96QZ7 1491 aaPredicted RBP11.35□□□□□ -0.59
ZNF561-214ENST00000479943 SYNJ1O43426 1573 aa11.33□□□□□ -0.6
ZNF561-214ENST00000479943 GRIN2BQ13224 1484 aa11.32□□□□□ -0.6
ZNF561-214ENST00000479943 SYNJ2O15056 1496 aa11.32□□□□□ -0.6
ZNF561-214ENST00000479943 TRHP20396 242 aaPredicted RBP11.31□□□□□ -0.6
ZNF561-214ENST00000479943 PBRM1Q86U86 1689 aa11.3□□□□□ -0.6
ZNF561-214ENST00000479943 ABCA5Q8WWZ7 1642 aa11.29□□□□□ -0.6
ZNF561-214ENST00000479943 GAPVD1Q14C86 1478 aa11.28□□□□□ -0.6
ZNF561-214ENST00000479943 CHMP7Q8WUX9 453 aaPredicted RBP11.28□□□□□ -0.6
ZNF561-214ENST00000479943 ABCA10Q8WWZ4 1543 aa11.27□□□□□ -0.61
ZNF561-214ENST00000479943 ERCC6L2Q5T890 1561 aa11.24□□□□□ -0.61
ZNF561-214ENST00000479943 ADAMTS12P58397 1594 aa11.2□□□□□ -0.62
ZNF561-214ENST00000479943 CEP170Q5SW79 1584 aa11.2□□□□□ -0.62
ZNF561-214ENST00000479943 GRIN2AQ12879 1464 aa11.2□□□□□ -0.62
ZNF561-214ENST00000479943 NUP160Q12769 1436 aa11.2□□□□□ -0.62
ZNF561-214ENST00000479943 SHROOM2Q13796 1616 aa11.17□□□□□ -0.62
ZNF561-214ENST00000479943 BIVM-ERCC5R4GMW8 1640 aa11.17□□□□□ -0.62
ZNF561-214ENST00000479943 AEBP2Q6ZN18 517 aaPredicted RBP11.16□□□□□ -0.62
ZNF561-214ENST00000479943 TOP2BQ02880 1626 aa11.16□□□□□ -0.62
ZNF561-214ENST00000479943 WRNQ14191 1432 aaPredicted RBP eCLIP11.15□□□□□ -0.62
ZNF561-214ENST00000479943 FHAD1B1AJZ9 1412 aa11.12□□□□□ -0.63
ZNF561-214ENST00000479943 ERICH3Q5RHP9 1530 aa11.11□□□□□ -0.63
ZNF561-214ENST00000479943 KIF13AQ9H1H9 1805 aa11.09□□□□□ -0.63
ZNF561-214ENST00000479943 SUPT5HO00267 1087 aaKnown RBP11.07□□□□□ -0.64
ZNF561-214ENST00000479943 RUSC2Q8N2Y8 1516 aa11.05□□□□□ -0.64
ZNF561-214ENST00000479943 PRG4Q92954 1404 aaPredicted RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms