RNA–Protein interactions for RNA: ENST00000479873.5

PABPC1L-212, Transcript of poly(A) binding protein cytoplasmic 1 like, humanhuman

TSL 2

Gene PABPC1L, Length 1,178 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1L-212ENST00000479873 NISCHQ9Y2I1 1504 aa22.5■■□□□ 1.19
PABPC1L-212ENST00000479873 ABCC9O60706 1549 aa21.19■□□□□ 0.98
PABPC1L-212ENST00000479873 DNAJC5BQ9UF47 199 aa20.6■□□□□ 0.89
PABPC1L-212ENST00000479873 CCDC180Q9P1Z9 1646 aa20.26■□□□□ 0.83
PABPC1L-212ENST00000479873 PABPN1Q86U42 306 aaKnown RBP eCLIP19.79■□□□□ 0.762e-8■■□□□ 11.6
PABPC1L-212ENST00000479873 RB1CC1Q8TDY2 1594 aa19.72■□□□□ 0.75
PABPC1L-212ENST00000479873 DCAF8L2P0C7V8 631 aa19.66■□□□□ 0.74
PABPC1L-212ENST00000479873 NACADO15069 1562 aa19.42■□□□□ 0.7
PABPC1L-212ENST00000479873 DNAJC5Q9H3Z4 198 aa19.3■□□□□ 0.68
PABPC1L-212ENST00000479873 BICRAQ9NZM4 1560 aa19.19■□□□□ 0.66
PABPC1L-212ENST00000479873 UNC13AQ9UPW8 1703 aa19.17■□□□□ 0.66
PABPC1L-212ENST00000479873 CECR2Q9BXF3 1484 aa19.1■□□□□ 0.65
PABPC1L-212ENST00000479873 CC2D2AQ9P2K1 1620 aa18.99■□□□□ 0.63
PABPC1L-212ENST00000479873 MYO15BQ96JP2 1530 aa18.88■□□□□ 0.61
PABPC1L-212ENST00000479873 EIF4G1Q04637 1599 aaKnown RBP18.77■□□□□ 0.6
PABPC1L-212ENST00000479873 SHROOM4Q9ULL8 1493 aa18.71■□□□□ 0.59
PABPC1L-212ENST00000479873 SCRIBQ14160 1630 aa18.61■□□□□ 0.57
PABPC1L-212ENST00000479873 ZCCHC6Q5VYS8 1495 aaKnown RBP18.44■□□□□ 0.54
PABPC1L-212ENST00000479873 DCAF1Q9Y4B6 1507 aa18.43■□□□□ 0.54
PABPC1L-212ENST00000479873 CUX2O14529 1486 aa18.37■□□□□ 0.53
PABPC1L-212ENST00000479873 TRIM41Q8WV44 630 aa18.3■□□□□ 0.52
PABPC1L-212ENST00000479873 ERCC6Q03468 1493 aa18.3■□□□□ 0.52
PABPC1L-212ENST00000479873 NCAPD3P42695 1498 aa18.02■□□□□ 0.48
PABPC1L-212ENST00000479873 NESP48681 1621 aa18.01■□□□□ 0.47
PABPC1L-212ENST00000479873 ATAD2BQ9ULI0 1458 aa17.89■□□□□ 0.45
PABPC1L-212ENST00000479873 THOC2Q8NI27 1593 aaKnown RBP17.76■□□□□ 0.43
PABPC1L-212ENST00000479873 SMARCA2P51531 1590 aa17.73■□□□□ 0.43
PABPC1L-212ENST00000479873 HMGXB3Q12766 1538 aa17.7■□□□□ 0.42
PABPC1L-212ENST00000479873 PDS5BQ9NTI5 1447 aa17.67■□□□□ 0.42
PABPC1L-212ENST00000479873 OSCARQ8IYS5 282 aa17.67■□□□□ 0.42
PABPC1L-212ENST00000479873 BAZ1BQ9UIG0 1483 aaKnown RBP17.67■□□□□ 0.42
PABPC1L-212ENST00000479873 LAMC3Q9Y6N6 1575 aa17.62■□□□□ 0.41
PABPC1L-212ENST00000479873 SMARCA4P51532 1647 aa17.62■□□□□ 0.41
PABPC1L-212ENST00000479873 KIF21AQ7Z4S6 1674 aa17.59■□□□□ 0.41
PABPC1L-212ENST00000479873 CADPSQ9ULU8 1353 aa17.51■□□□□ 0.39
PABPC1L-212ENST00000479873 MRC2Q9UBG0 1479 aa17.5■□□□□ 0.39
PABPC1L-212ENST00000479873 BAZ1AQ9NRL2 1556 aaPredicted RBP17.46■□□□□ 0.39
PABPC1L-212ENST00000479873 WDR62O43379 1518 aa17.41■□□□□ 0.38
PABPC1L-212ENST00000479873 PEG3Q9GZU2 1588 aa17.4■□□□□ 0.38
PABPC1L-212ENST00000479873 TRHP20396 242 aaPredicted RBP17.39■□□□□ 0.37
PABPC1L-212ENST00000479873 MROH2BQ7Z745 1585 aa17.37■□□□□ 0.37
PABPC1L-212ENST00000479873 CYB5RLQ6IPT4 315 aa17.36■□□□□ 0.37
PABPC1L-212ENST00000479873 AEBP2Q6ZN18 517 aaPredicted RBP17.32■□□□□ 0.36
PABPC1L-212ENST00000479873 CEP164Q9UPV0 1460 aa17.3■□□□□ 0.36
PABPC1L-212ENST00000479873 RIMBP3CA6NJZ7 1639 aa17.29■□□□□ 0.36
PABPC1L-212ENST00000479873 RIMBP3BA6NNM3 1639 aa17.29■□□□□ 0.36
PABPC1L-212ENST00000479873 RIMBP3Q9UFD9 1639 aa17.29■□□□□ 0.36
PABPC1L-212ENST00000479873 FANCD2Q9BXW9 1451 aa17.26■□□□□ 0.35
PABPC1L-212ENST00000479873 ARHGEF11O15085 1522 aa17.19■□□□□ 0.34
PABPC1L-212ENST00000479873 URB2Q14146 1524 aaKnown RBP17.16■□□□□ 0.34
PABPC1L-212ENST00000479873 CFTRP13569 1480 aa17.11■□□□□ 0.33
PABPC1L-212ENST00000479873 WIZO95785 1651 aa17.1■□□□□ 0.33
PABPC1L-212ENST00000479873 ZNF608Q9ULD9 1512 aaPredicted RBP17.1■□□□□ 0.33
PABPC1L-212ENST00000479873 FBLN2P98095 1184 aa17.08■□□□□ 0.32
PABPC1L-212ENST00000479873 ARAP1Q96P48 1450 aa16.99■□□□□ 0.31
PABPC1L-212ENST00000479873 IFT140Q96RY7 1462 aa16.99■□□□□ 0.31
PABPC1L-212ENST00000479873 AQRO60306 1485 aaKnown RBP eCLIP16.93■□□□□ 0.32e-6■■■■□ 21.7
PABPC1L-212ENST00000479873 RSF1Q96T23 1441 aaPredicted RBP16.85■□□□□ 0.29
PABPC1L-212ENST00000479873 TOPBP1Q92547 1522 aa16.85■□□□□ 0.29
PABPC1L-212ENST00000479873 EIF4G3O43432 1585 aaKnown RBP16.82■□□□□ 0.28
PABPC1L-212ENST00000479873 CHD1O14646 1710 aa16.8■□□□□ 0.28
PABPC1L-212ENST00000479873 CHMP7Q8WUX9 453 aaPredicted RBP16.78■□□□□ 0.28
PABPC1L-212ENST00000479873 TOP2AP11388 1531 aaKnown RBP16.77■□□□□ 0.28
PABPC1L-212ENST00000479873 TDRD9Q8NDG6 1382 aaKnown RBP16.76■□□□□ 0.27
PABPC1L-212ENST00000479873 CCDC88BA6NC98 1476 aa16.74■□□□□ 0.27
PABPC1L-212ENST00000479873 ABCC8Q09428 1581 aa16.73■□□□□ 0.27
PABPC1L-212ENST00000479873 RAD54L2Q9Y4B4 1467 aa16.69■□□□□ 0.26
PABPC1L-212ENST00000479873 TARBP1Q13395 1621 aaKnown RBP16.68■□□□□ 0.26
PABPC1L-212ENST00000479873 SOGA1O94964 1423 aa16.66■□□□□ 0.26
PABPC1L-212ENST00000479873 DNMBPQ6XZF7 1577 aa16.66■□□□□ 0.26
PABPC1L-212ENST00000479873 ILDR1Q86SU0 546 aaPredicted RBP16.65■□□□□ 0.26
PABPC1L-212ENST00000479873 POLA1P09884 1462 aaPredicted RBP16.63■□□□□ 0.25
PABPC1L-212ENST00000479873 SNAPC4Q5SXM2 1469 aa16.63■□□□□ 0.25
PABPC1L-212ENST00000479873 PRDM2Q13029 1718 aa16.62■□□□□ 0.25
PABPC1L-212ENST00000479873 CLASP1Q7Z460 1538 aa16.62■□□□□ 0.25
PABPC1L-212ENST00000479873 GAPVD1Q14C86 1478 aa16.6■□□□□ 0.25
PABPC1L-212ENST00000479873 SYNJ1O43426 1573 aa16.56■□□□□ 0.24
PABPC1L-212ENST00000479873 MAGI1Q96QZ7 1491 aaPredicted RBP16.49■□□□□ 0.23
PABPC1L-212ENST00000479873 SYNJ2O15056 1496 aa16.48■□□□□ 0.23
PABPC1L-212ENST00000479873 GRIN2BQ13224 1484 aa16.48■□□□□ 0.23
PABPC1L-212ENST00000479873 KDM4FA0A1W2PPD8 638 aa16.47■□□□□ 0.23
PABPC1L-212ENST00000479873 FGD5Q6ZNL6 1462 aa16.46■□□□□ 0.23
PABPC1L-212ENST00000479873 ERCC6L2Q5T890 1561 aa16.43■□□□□ 0.22
PABPC1L-212ENST00000479873 FAM69CQ0P6D2 419 aa16.41■□□□□ 0.22
PABPC1L-212ENST00000479873 WDR97A6NE52 1622 aa16.34■□□□□ 0.21
PABPC1L-212ENST00000479873 CUX1P39880 1505 aa16.33■□□□□ 0.2
PABPC1L-212ENST00000479873 NPM1P06748 294 aaKnown RBP eCLIP16.32■□□□□ 0.2
PABPC1L-212ENST00000479873 CEP170Q5SW79 1584 aa16.28■□□□□ 0.2
PABPC1L-212ENST00000479873 KIF13AQ9H1H9 1805 aa16.26■□□□□ 0.19
PABPC1L-212ENST00000479873 GRIN2AQ12879 1464 aa16.25■□□□□ 0.19
PABPC1L-212ENST00000479873 JPH4Q96JJ6 628 aa16.25■□□□□ 0.19
PABPC1L-212ENST00000479873 PBRM1Q86U86 1689 aa16.24■□□□□ 0.19
PABPC1L-212ENST00000479873 PRG4Q92954 1404 aaPredicted RBP16.22■□□□□ 0.19
PABPC1L-212ENST00000479873 NUP160Q12769 1436 aa16.21■□□□□ 0.19
PABPC1L-212ENST00000479873 ABCC10Q5T3U5 1492 aa16.21■□□□□ 0.19
PABPC1L-212ENST00000479873 ABCA10Q8WWZ4 1543 aa16.19■□□□□ 0.18
PABPC1L-212ENST00000479873 ABCA5Q8WWZ7 1642 aa16.15■□□□□ 0.18
PABPC1L-212ENST00000479873 FHAD1B1AJZ9 1412 aa16.13■□□□□ 0.17
PABPC1L-212ENST00000479873 KDM6BO15054 1643 aa16.12■□□□□ 0.17
PABPC1L-212ENST00000479873 SHROOM2Q13796 1616 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms