RNA–Protein interactions for RNA: ENST00000479715.5

PSMF1-209, Transcript of proteasome inhibitor subunit 1, humanhuman

TSL 3

Gene PSMF1, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMF1-209ENST00000479715 NISCHQ9Y2I1 1504 aa32.61■■■□□ 2.81
PSMF1-209ENST00000479715 CCDC180Q9P1Z9 1646 aa29.39■■■□□ 2.3
PSMF1-209ENST00000479715 ABCC9O60706 1549 aa29.3■■■□□ 2.28
PSMF1-209ENST00000479715 RB1CC1Q8TDY2 1594 aa27.86■■■□□ 2.05
PSMF1-209ENST00000479715 NACADO15069 1562 aa27.65■■■□□ 2.02
PSMF1-209ENST00000479715 UNC13AQ9UPW8 1703 aa27.55■■■□□ 2
PSMF1-209ENST00000479715 DNAJC5BQ9UF47 199 aa27.43■■□□□ 1.98
PSMF1-209ENST00000479715 DCAF8L2P0C7V8 631 aa27.34■■□□□ 1.97
PSMF1-209ENST00000479715 MYO15BQ96JP2 1530 aa27.21■■□□□ 1.95
PSMF1-209ENST00000479715 BICRAQ9NZM4 1560 aa27.18■■□□□ 1.94
PSMF1-209ENST00000479715 PABPN1Q86U42 306 aaKnown RBP eCLIP27.18■■□□□ 1.94
PSMF1-209ENST00000479715 ZCCHC6Q5VYS8 1495 aaKnown RBP27.08■■□□□ 1.93
PSMF1-209ENST00000479715 DCAF1Q9Y4B6 1507 aa26.9■■□□□ 1.9
PSMF1-209ENST00000479715 SCRIBQ14160 1630 aa26.81■■□□□ 1.88
PSMF1-209ENST00000479715 SHROOM4Q9ULL8 1493 aa26.61■■□□□ 1.85
PSMF1-209ENST00000479715 CC2D2AQ9P2K1 1620 aa26.53■■□□□ 1.84
PSMF1-209ENST00000479715 EIF4G1Q04637 1599 aaKnown RBP26.45■■□□□ 1.82
PSMF1-209ENST00000479715 CECR2Q9BXF3 1484 aa26.34■■□□□ 1.81
PSMF1-209ENST00000479715 SMARCA4P51532 1647 aa25.54■■□□□ 1.68
PSMF1-209ENST00000479715 NCAPD3P42695 1498 aa25.47■■□□□ 1.67
PSMF1-209ENST00000479715 ATAD2BQ9ULI0 1458 aa25.45■■□□□ 1.66
PSMF1-209ENST00000479715 HMGXB3Q12766 1538 aa25.38■■□□□ 1.65
PSMF1-209ENST00000479715 SMARCA2P51531 1590 aa25.37■■□□□ 1.65
PSMF1-209ENST00000479715 BAZ1AQ9NRL2 1556 aaPredicted RBP25.31■■□□□ 1.64
PSMF1-209ENST00000479715 PEG3Q9GZU2 1588 aa25.24■■□□□ 1.63
PSMF1-209ENST00000479715 NESP48681 1621 aa25.23■■□□□ 1.63
PSMF1-209ENST00000479715 ERCC6Q03468 1493 aa25.21■■□□□ 1.63
PSMF1-209ENST00000479715 BAZ1BQ9UIG0 1483 aaKnown RBP25.21■■□□□ 1.63
PSMF1-209ENST00000479715 MROH2BQ7Z745 1585 aa25.2■■□□□ 1.62
PSMF1-209ENST00000479715 CUX2O14529 1486 aa25.17■■□□□ 1.62
PSMF1-209ENST00000479715 THOC2Q8NI27 1593 aaKnown RBP25.05■■□□□ 1.6
PSMF1-209ENST00000479715 DNAJC5Q9H3Z4 198 aa25.04■■□□□ 1.6
PSMF1-209ENST00000479715 KIF21AQ7Z4S6 1674 aa25.04■■□□□ 1.6
PSMF1-209ENST00000479715 WIZO95785 1651 aa24.98■■□□□ 1.59
PSMF1-209ENST00000479715 LAMC3Q9Y6N6 1575 aa24.98■■□□□ 1.59
PSMF1-209ENST00000479715 PDS5BQ9NTI5 1447 aa24.69■■□□□ 1.54
PSMF1-209ENST00000479715 CADPSQ9ULU8 1353 aa24.66■■□□□ 1.54
PSMF1-209ENST00000479715 WDR62O43379 1518 aa24.61■■□□□ 1.53
PSMF1-209ENST00000479715 MRC2Q9UBG0 1479 aa24.6■■□□□ 1.53
PSMF1-209ENST00000479715 RSF1Q96T23 1441 aaPredicted RBP24.58■■□□□ 1.53
PSMF1-209ENST00000479715 TOP2AP11388 1531 aaKnown RBP24.57■■□□□ 1.52
PSMF1-209ENST00000479715 CEP164Q9UPV0 1460 aa24.5■■□□□ 1.51
PSMF1-209ENST00000479715 PRDM2Q13029 1718 aa24.49■■□□□ 1.51
PSMF1-209ENST00000479715 FANCD2Q9BXW9 1451 aa24.47■■□□□ 1.51
PSMF1-209ENST00000479715 CFTRP13569 1480 aa24.45■■□□□ 1.5
PSMF1-209ENST00000479715 URB2Q14146 1524 aaKnown RBP24.35■■□□□ 1.49
PSMF1-209ENST00000479715 CCDC88BA6NC98 1476 aa24.23■■□□□ 1.47
PSMF1-209ENST00000479715 TOPBP1Q92547 1522 aa24.05■■□□□ 1.44
PSMF1-209ENST00000479715 ZNF608Q9ULD9 1512 aaPredicted RBP24.05■■□□□ 1.44
PSMF1-209ENST00000479715 TRIM41Q8WV44 630 aa24.01■■□□□ 1.43
PSMF1-209ENST00000479715 EIF4G3O43432 1585 aaKnown RBP23.99■■□□□ 1.43
PSMF1-209ENST00000479715 DNMBPQ6XZF7 1577 aa23.98■■□□□ 1.43
PSMF1-209ENST00000479715 IFT140Q96RY7 1462 aa23.96■■□□□ 1.43
PSMF1-209ENST00000479715 TARBP1Q13395 1621 aaKnown RBP23.92■■□□□ 1.42
PSMF1-209ENST00000479715 CHD1O14646 1710 aa23.89■■□□□ 1.41
PSMF1-209ENST00000479715 RIMBP3CA6NJZ7 1639 aa23.88■■□□□ 1.41
PSMF1-209ENST00000479715 RIMBP3BA6NNM3 1639 aa23.88■■□□□ 1.41
PSMF1-209ENST00000479715 RIMBP3Q9UFD9 1639 aa23.88■■□□□ 1.41
PSMF1-209ENST00000479715 OSCARQ8IYS5 282 aa23.86■■□□□ 1.41
PSMF1-209ENST00000479715 ABCC8Q09428 1581 aa23.83■■□□□ 1.41
PSMF1-209ENST00000479715 POLA1P09884 1462 aaPredicted RBP23.8■■□□□ 1.4
PSMF1-209ENST00000479715 SUPT5HO00267 1087 aaKnown RBP23.76■■□□□ 1.39
PSMF1-209ENST00000479715 AQRO60306 1485 aaKnown RBP eCLIP23.75■■□□□ 1.391e-6■■■■■ 27.8
PSMF1-209ENST00000479715 RAD54L2Q9Y4B4 1467 aa23.72■■□□□ 1.39
PSMF1-209ENST00000479715 ARHGEF11O15085 1522 aa23.72■■□□□ 1.39
PSMF1-209ENST00000479715 CUX1P39880 1505 aa23.69■■□□□ 1.38
PSMF1-209ENST00000479715 WDR97A6NE52 1622 aa23.68■■□□□ 1.38
PSMF1-209ENST00000479715 FGD5Q6ZNL6 1462 aa23.66■■□□□ 1.38
PSMF1-209ENST00000479715 PBRM1Q86U86 1689 aa23.58■■□□□ 1.37
PSMF1-209ENST00000479715 SOGA1O94964 1423 aa23.58■■□□□ 1.36
PSMF1-209ENST00000479715 TDRD9Q8NDG6 1382 aaKnown RBP23.56■■□□□ 1.36
PSMF1-209ENST00000479715 SNAPC4Q5SXM2 1469 aa23.56■■□□□ 1.36
PSMF1-209ENST00000479715 ARAP1Q96P48 1450 aa23.5■■□□□ 1.35
PSMF1-209ENST00000479715 CLASP1Q7Z460 1538 aa23.49■■□□□ 1.35
PSMF1-209ENST00000479715 FBLN2P98095 1184 aa23.46■■□□□ 1.35
PSMF1-209ENST00000479715 ABCA5Q8WWZ7 1642 aa23.45■■□□□ 1.34
PSMF1-209ENST00000479715 MAGI1Q96QZ7 1491 aaPredicted RBP23.43■■□□□ 1.34
PSMF1-209ENST00000479715 GRIN2BQ13224 1484 aa23.4■■□□□ 1.34
PSMF1-209ENST00000479715 SYNJ1O43426 1573 aa23.4■■□□□ 1.34
PSMF1-209ENST00000479715 CYB5RLQ6IPT4 315 aa23.37■■□□□ 1.33
PSMF1-209ENST00000479715 BIVM-ERCC5R4GMW8 1640 aa23.36■■□□□ 1.33
PSMF1-209ENST00000479715 ABCA10Q8WWZ4 1543 aa23.35■■□□□ 1.33
PSMF1-209ENST00000479715 SYNJ2O15056 1496 aa23.35■■□□□ 1.33
PSMF1-209ENST00000479715 GAPVD1Q14C86 1478 aa23.34■■□□□ 1.33
PSMF1-209ENST00000479715 TOP2BQ02880 1626 aa23.29■■□□□ 1.32
PSMF1-209ENST00000479715 ADAMTS12P58397 1594 aa23.27■■□□□ 1.32
PSMF1-209ENST00000479715 CHMP7Q8WUX9 453 aaPredicted RBP23.25■■□□□ 1.31
PSMF1-209ENST00000479715 CEP170Q5SW79 1584 aa23.19■■□□□ 1.3
PSMF1-209ENST00000479715 ERCC6L2Q5T890 1561 aa23.19■■□□□ 1.3
PSMF1-209ENST00000479715 GRIN2AQ12879 1464 aa23.17■■□□□ 1.3
PSMF1-209ENST00000479715 WRNQ14191 1432 aaPredicted RBP eCLIP23.16■■□□□ 1.3
PSMF1-209ENST00000479715 SHROOM2Q13796 1616 aa23.09■■□□□ 1.29
PSMF1-209ENST00000479715 TRHP20396 242 aaPredicted RBP23.07■■□□□ 1.28
PSMF1-209ENST00000479715 NUP160Q12769 1436 aa23.07■■□□□ 1.28
PSMF1-209ENST00000479715 ERICH3Q5RHP9 1530 aa23.05■■□□□ 1.28
PSMF1-209ENST00000479715 FHAD1B1AJZ9 1412 aa23■■□□□ 1.27
PSMF1-209ENST00000479715 RUSC2Q8N2Y8 1516 aa22.96■■□□□ 1.27
PSMF1-209ENST00000479715 KIF13AQ9H1H9 1805 aa22.89■■□□□ 1.25
PSMF1-209ENST00000479715 PRG4Q92954 1404 aaPredicted RBP22.8■■□□□ 1.24
PSMF1-209ENST00000479715 CUL7Q14999 1698 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms