RNA–Protein interactions for RNA: ENST00000479598.5

SLC40A1-207, Transcript of solute carrier family 40 member 1, humanhuman

TSL 1 (best)

Gene SLC40A1, Length 993 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC40A1-207ENST00000479598 NISCHQ9Y2I1 1504 aa23.41■■□□□ 1.34
SLC40A1-207ENST00000479598 CCDC180Q9P1Z9 1646 aa21.04■□□□□ 0.96
SLC40A1-207ENST00000479598 ABCC9O60706 1549 aa20.83■□□□□ 0.93
SLC40A1-207ENST00000479598 RB1CC1Q8TDY2 1594 aa19.94■□□□□ 0.78
SLC40A1-207ENST00000479598 NACADO15069 1562 aa19.83■□□□□ 0.77
SLC40A1-207ENST00000479598 DCAF8L2P0C7V8 631 aa19.69■□□□□ 0.74
SLC40A1-207ENST00000479598 MYO15BQ96JP2 1530 aa19.6■□□□□ 0.73
SLC40A1-207ENST00000479598 UNC13AQ9UPW8 1703 aa19.58■□□□□ 0.72
SLC40A1-207ENST00000479598 AEBP2Q6ZN18 517 aaPredicted RBP19.52■□□□□ 0.72
SLC40A1-207ENST00000479598 DNAJC5BQ9UF47 199 aa19.45■□□□□ 0.7
SLC40A1-207ENST00000479598 PABPN1Q86U42 306 aaKnown RBP eCLIP19.4■□□□□ 0.7
SLC40A1-207ENST00000479598 ZCCHC6Q5VYS8 1495 aaKnown RBP19.4■□□□□ 0.7
SLC40A1-207ENST00000479598 DCAF1Q9Y4B6 1507 aa19.37■□□□□ 0.69
SLC40A1-207ENST00000479598 BICRAQ9NZM4 1560 aa19.34■□□□□ 0.69
SLC40A1-207ENST00000479598 SCRIBQ14160 1630 aa19.1■□□□□ 0.65
SLC40A1-207ENST00000479598 SHROOM4Q9ULL8 1493 aa19.09■□□□□ 0.65
SLC40A1-207ENST00000479598 CC2D2AQ9P2K1 1620 aa18.88■□□□□ 0.61
SLC40A1-207ENST00000479598 EIF4G1Q04637 1599 aaKnown RBP18.85■□□□□ 0.61
SLC40A1-207ENST00000479598 CHIC1Q5VXU3 224 aa18.77■□□□□ 0.6
SLC40A1-207ENST00000479598 CECR2Q9BXF3 1484 aa18.77■□□□□ 0.59
SLC40A1-207ENST00000479598 NCAPD3P42695 1498 aa18.27■□□□□ 0.52
SLC40A1-207ENST00000479598 SMARCA4P51532 1647 aa18.26■□□□□ 0.51
SLC40A1-207ENST00000479598 ATAD2BQ9ULI0 1458 aa18.22■□□□□ 0.51
SLC40A1-207ENST00000479598 SMARCA2P51531 1590 aa18.21■□□□□ 0.51
SLC40A1-207ENST00000479598 BAZ1AQ9NRL2 1556 aaPredicted RBP18.17■□□□□ 0.5
SLC40A1-207ENST00000479598 HMGXB3Q12766 1538 aa18.16■□□□□ 0.5
SLC40A1-207ENST00000479598 PEG3Q9GZU2 1588 aa18.09■□□□□ 0.49
SLC40A1-207ENST00000479598 BAZ1BQ9UIG0 1483 aaKnown RBP18.05■□□□□ 0.48
SLC40A1-207ENST00000479598 MROH2BQ7Z745 1585 aa18.02■□□□□ 0.48
SLC40A1-207ENST00000479598 ERCC6Q03468 1493 aa17.99■□□□□ 0.47
SLC40A1-207ENST00000479598 CUX2O14529 1486 aa17.95■□□□□ 0.46
SLC40A1-207ENST00000479598 NESP48681 1621 aa17.93■□□□□ 0.46
SLC40A1-207ENST00000479598 LAMC3Q9Y6N6 1575 aa17.88■□□□□ 0.45
SLC40A1-207ENST00000479598 WIZO95785 1651 aa17.86■□□□□ 0.45
SLC40A1-207ENST00000479598 DNAJC5Q9H3Z4 198 aa17.83■□□□□ 0.44
SLC40A1-207ENST00000479598 RSF1Q96T23 1441 aaPredicted RBP17.8■□□□□ 0.44
SLC40A1-207ENST00000479598 KIF21AQ7Z4S6 1674 aa17.78■□□□□ 0.44
SLC40A1-207ENST00000479598 THOC2Q8NI27 1593 aaKnown RBP17.76■□□□□ 0.43
SLC40A1-207ENST00000479598 PDS5BQ9NTI5 1447 aa17.74■□□□□ 0.43
SLC40A1-207ENST00000479598 CADPSQ9ULU8 1353 aa17.71■□□□□ 0.43
SLC40A1-207ENST00000479598 TOP2AP11388 1531 aaKnown RBP17.61■□□□□ 0.41
SLC40A1-207ENST00000479598 MRC2Q9UBG0 1479 aa17.56■□□□□ 0.4
SLC40A1-207ENST00000479598 WDR62O43379 1518 aa17.54■□□□□ 0.4
SLC40A1-207ENST00000479598 CFTRP13569 1480 aa17.54■□□□□ 0.4
SLC40A1-207ENST00000479598 CEP164Q9UPV0 1460 aa17.52■□□□□ 0.4
SLC40A1-207ENST00000479598 PRDM2Q13029 1718 aa17.51■□□□□ 0.39
SLC40A1-207ENST00000479598 FANCD2Q9BXW9 1451 aa17.5■□□□□ 0.39
SLC40A1-207ENST00000479598 SUPT5HO00267 1087 aaKnown RBP17.48■□□□□ 0.39
SLC40A1-207ENST00000479598 CCDC88BA6NC98 1476 aa17.4■□□□□ 0.38
SLC40A1-207ENST00000479598 URB2Q14146 1524 aaKnown RBP17.36■□□□□ 0.37
SLC40A1-207ENST00000479598 ABCC8Q09428 1581 aa17.22■□□□□ 0.35
SLC40A1-207ENST00000479598 TOPBP1Q92547 1522 aa17.2■□□□□ 0.34
SLC40A1-207ENST00000479598 IFT140Q96RY7 1462 aa17.18■□□□□ 0.34
SLC40A1-207ENST00000479598 DNMBPQ6XZF7 1577 aa17.16■□□□□ 0.34
SLC40A1-207ENST00000479598 OSCARQ8IYS5 282 aa17.16■□□□□ 0.34
SLC40A1-207ENST00000479598 ZNF608Q9ULD9 1512 aaPredicted RBP17.11■□□□□ 0.33
SLC40A1-207ENST00000479598 TARBP1Q13395 1621 aaKnown RBP17.07■□□□□ 0.32
SLC40A1-207ENST00000479598 EIF4G3O43432 1585 aaKnown RBP17.06■□□□□ 0.32
SLC40A1-207ENST00000479598 TRIM41Q8WV44 630 aa17.04■□□□□ 0.32
SLC40A1-207ENST00000479598 POLA1P09884 1462 aaPredicted RBP17.01■□□□□ 0.31
SLC40A1-207ENST00000479598 AQRO60306 1485 aaKnown RBP eCLIP16.98■□□□□ 0.312e-6■■■□□ 18.2
SLC40A1-207ENST00000479598 CHD1O14646 1710 aa16.97■□□□□ 0.31
SLC40A1-207ENST00000479598 SOGA1O94964 1423 aa16.96■□□□□ 0.3
SLC40A1-207ENST00000479598 RAD54L2Q9Y4B4 1467 aa16.93■□□□□ 0.3
SLC40A1-207ENST00000479598 WDR97A6NE52 1622 aa16.93■□□□□ 0.3
SLC40A1-207ENST00000479598 RIMBP3CA6NJZ7 1639 aa16.93■□□□□ 0.3
SLC40A1-207ENST00000479598 RIMBP3BA6NNM3 1639 aa16.93■□□□□ 0.3
SLC40A1-207ENST00000479598 RIMBP3Q9UFD9 1639 aa16.93■□□□□ 0.3
SLC40A1-207ENST00000479598 CUX1P39880 1505 aa16.93■□□□□ 0.3
SLC40A1-207ENST00000479598 FGD5Q6ZNL6 1462 aa16.92■□□□□ 0.3
SLC40A1-207ENST00000479598 TDRD9Q8NDG6 1382 aaKnown RBP16.88■□□□□ 0.29
SLC40A1-207ENST00000479598 ARHGEF11O15085 1522 aa16.86■□□□□ 0.29
SLC40A1-207ENST00000479598 FBLN2P98095 1184 aa16.84■□□□□ 0.29
SLC40A1-207ENST00000479598 PBRM1Q86U86 1689 aa16.81■□□□□ 0.28
SLC40A1-207ENST00000479598 SNAPC4Q5SXM2 1469 aa16.8■□□□□ 0.28
SLC40A1-207ENST00000479598 MAGI1Q96QZ7 1491 aaPredicted RBP16.8■□□□□ 0.28
SLC40A1-207ENST00000479598 GRIN2BQ13224 1484 aa16.79■□□□□ 0.28
SLC40A1-207ENST00000479598 WRNQ14191 1432 aaPredicted RBP eCLIP16.76■□□□□ 0.27
SLC40A1-207ENST00000479598 ABCA10Q8WWZ4 1543 aa16.75■□□□□ 0.27
SLC40A1-207ENST00000479598 GAPVD1Q14C86 1478 aa16.75■□□□□ 0.27
SLC40A1-207ENST00000479598 CHMP7Q8WUX9 453 aaPredicted RBP16.75■□□□□ 0.27
SLC40A1-207ENST00000479598 BIVM-ERCC5R4GMW8 1640 aa16.74■□□□□ 0.27
SLC40A1-207ENST00000479598 ABCA5Q8WWZ7 1642 aa16.74■□□□□ 0.27
SLC40A1-207ENST00000479598 SYNJ2O15056 1496 aa16.73■□□□□ 0.27
SLC40A1-207ENST00000479598 SYNJ1O43426 1573 aa16.73■□□□□ 0.27
SLC40A1-207ENST00000479598 CLASP1Q7Z460 1538 aa16.72■□□□□ 0.27
SLC40A1-207ENST00000479598 TOP2BQ02880 1626 aa16.72■□□□□ 0.27
SLC40A1-207ENST00000479598 CYB5RLQ6IPT4 315 aa16.72■□□□□ 0.27
SLC40A1-207ENST00000479598 SENP3Q9H4L4 574 aaPredicted RBP16.68■□□□□ 0.26
SLC40A1-207ENST00000479598 ARAP1Q96P48 1450 aa16.67■□□□□ 0.26
SLC40A1-207ENST00000479598 ADAMTS12P58397 1594 aa16.58■□□□□ 0.24
SLC40A1-207ENST00000479598 GRIN2AQ12879 1464 aa16.57■□□□□ 0.24
SLC40A1-207ENST00000479598 ERICH3Q5RHP9 1530 aa16.56■□□□□ 0.24
SLC40A1-207ENST00000479598 FHAD1B1AJZ9 1412 aa16.53■□□□□ 0.24
SLC40A1-207ENST00000479598 CEP170Q5SW79 1584 aa16.51■□□□□ 0.23
SLC40A1-207ENST00000479598 NUP160Q12769 1436 aa16.51■□□□□ 0.23
SLC40A1-207ENST00000479598 TRHP20396 242 aaPredicted RBP16.5■□□□□ 0.23
SLC40A1-207ENST00000479598 SHROOM2Q13796 1616 aa16.48■□□□□ 0.23
SLC40A1-207ENST00000479598 PHF23Q9BUL5 403 aaPredicted RBP16.46■□□□□ 0.23
SLC40A1-207ENST00000479598 ERCC6L2Q5T890 1561 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms