RNA–Protein interactions for RNA: ENST00000479591.1

TM9SF4-206, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2

Gene TM9SF4, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-206ENST00000479591 NISCHQ9Y2I1 1504 aa27.6■■■□□ 2.01
TM9SF4-206ENST00000479591 CCDC180Q9P1Z9 1646 aa24.25■■□□□ 1.47
TM9SF4-206ENST00000479591 ZCCHC6Q5VYS8 1495 aaKnown RBP23.16■■□□□ 1.3
TM9SF4-206ENST00000479591 ABCC9O60706 1549 aa22.98■■□□□ 1.27
TM9SF4-206ENST00000479591 DCAF1Q9Y4B6 1507 aa22.9■■□□□ 1.26
TM9SF4-206ENST00000479591 DCAF8L2P0C7V8 631 aa22.73■■□□□ 1.23
TM9SF4-206ENST00000479591 MYO15BQ96JP2 1530 aa22.72■■□□□ 1.23
TM9SF4-206ENST00000479591 NACADO15069 1562 aa22.62■■□□□ 1.21
TM9SF4-206ENST00000479591 RB1CC1Q8TDY2 1594 aa22.46■■□□□ 1.19
TM9SF4-206ENST00000479591 SHROOM4Q9ULL8 1493 aa22.22■■□□□ 1.15
TM9SF4-206ENST00000479591 SCRIBQ14160 1630 aa22.15■■□□□ 1.14
TM9SF4-206ENST00000479591 UNC13AQ9UPW8 1703 aa21.96■■□□□ 1.11
TM9SF4-206ENST00000479591 BICRAQ9NZM4 1560 aa21.73■■□□□ 1.07
TM9SF4-206ENST00000479591 PABPN1Q86U42 306 aaKnown RBP eCLIP21.57■■□□□ 1.04
TM9SF4-206ENST00000479591 CECR2Q9BXF3 1484 aa21.39■■□□□ 1.02
TM9SF4-206ENST00000479591 BAZ1AQ9NRL2 1556 aaPredicted RBP21.36■■□□□ 1.01
TM9SF4-206ENST00000479591 RSF1Q96T23 1441 aaPredicted RBP21.29■■□□□ 1
TM9SF4-206ENST00000479591 SUPT5HO00267 1087 aaKnown RBP21.29■■□□□ 1
TM9SF4-206ENST00000479591 SMARCA4P51532 1647 aa21.27■■□□□ 1
TM9SF4-206ENST00000479591 MROH2BQ7Z745 1585 aa21.27■□□□□ 0.99
TM9SF4-206ENST00000479591 EIF4G1Q04637 1599 aaKnown RBP21.11■□□□□ 0.97
TM9SF4-206ENST00000479591 WIZO95785 1651 aa21.09■□□□□ 0.97
TM9SF4-206ENST00000479591 PEG3Q9GZU2 1588 aa21.06■□□□□ 0.96
TM9SF4-206ENST00000479591 DNAJC5BQ9UF47 199 aa21.02■□□□□ 0.96
TM9SF4-206ENST00000479591 SMARCA2P51531 1590 aa20.99■□□□□ 0.95
TM9SF4-206ENST00000479591 ATAD2BQ9ULI0 1458 aa20.96■□□□□ 0.95
TM9SF4-206ENST00000479591 TOP2AP11388 1531 aaKnown RBP20.93■□□□□ 0.94
TM9SF4-206ENST00000479591 NCAPD3P42695 1498 aa20.84■□□□□ 0.93
TM9SF4-206ENST00000479591 BAZ1BQ9UIG0 1483 aaKnown RBP20.83■□□□□ 0.93
TM9SF4-206ENST00000479591 CC2D2AQ9P2K1 1620 aa20.83■□□□□ 0.93
TM9SF4-206ENST00000479591 HMGXB3Q12766 1538 aa20.82■□□□□ 0.92
TM9SF4-206ENST00000479591 CCDC88BA6NC98 1476 aa20.66■□□□□ 0.9
TM9SF4-206ENST00000479591 CHIC1Q5VXU3 224 aa20.31■□□□□ 0.84
TM9SF4-206ENST00000479591 CFTRP13569 1480 aa20.3■□□□□ 0.84
TM9SF4-206ENST00000479591 CADPSQ9ULU8 1353 aa20.27■□□□□ 0.84
TM9SF4-206ENST00000479591 PRDM2Q13029 1718 aa20.26■□□□□ 0.83
TM9SF4-206ENST00000479591 LAMC3Q9Y6N6 1575 aa20.2■□□□□ 0.82
TM9SF4-206ENST00000479591 ABCC8Q09428 1581 aa20.12■□□□□ 0.81
TM9SF4-206ENST00000479591 TRIM41Q8WV44 630 aa20.1■□□□□ 0.81
TM9SF4-206ENST00000479591 NESP48681 1621 aa20.09■□□□□ 0.81
TM9SF4-206ENST00000479591 WRNQ14191 1432 aaPredicted RBP eCLIP20.07■□□□□ 0.8
TM9SF4-206ENST00000479591 FANCD2Q9BXW9 1451 aa20.04■□□□□ 0.8
TM9SF4-206ENST00000479591 PDS5BQ9NTI5 1447 aa20.02■□□□□ 0.8
TM9SF4-206ENST00000479591 SYNJ1O43426 1573 aa19.98■□□□□ 0.79
TM9SF4-206ENST00000479591 TOP2BQ02880 1626 aa19.96■□□□□ 0.79
TM9SF4-206ENST00000479591 BIVM-ERCC5R4GMW8 1640 aa19.96■□□□□ 0.79
TM9SF4-206ENST00000479591 CEP164Q9UPV0 1460 aa19.95■□□□□ 0.78
TM9SF4-206ENST00000479591 CUX1P39880 1505 aa19.92■□□□□ 0.78
TM9SF4-206ENST00000479591 KIF21AQ7Z4S6 1674 aa19.91■□□□□ 0.78
TM9SF4-206ENST00000479591 DNMBPQ6XZF7 1577 aa19.86■□□□□ 0.77
TM9SF4-206ENST00000479591 TOPBP1Q92547 1522 aa19.8■□□□□ 0.76
TM9SF4-206ENST00000479591 URB2Q14146 1524 aaKnown RBP19.78■□□□□ 0.76
TM9SF4-206ENST00000479591 MRC2Q9UBG0 1479 aa19.77■□□□□ 0.76
TM9SF4-206ENST00000479591 ERCC6Q03468 1493 aa19.76■□□□□ 0.75
TM9SF4-206ENST00000479591 FGD5Q6ZNL6 1462 aa19.74■□□□□ 0.75
TM9SF4-206ENST00000479591 EEA1Q15075 1411 aa19.74■□□□□ 0.75
TM9SF4-206ENST00000479591 SOGA1O94964 1423 aa19.69■□□□□ 0.74
TM9SF4-206ENST00000479591 POLA1P09884 1462 aaPredicted RBP19.68■□□□□ 0.74
TM9SF4-206ENST00000479591 WDR62O43379 1518 aa19.68■□□□□ 0.74
TM9SF4-206ENST00000479591 THOC2Q8NI27 1593 aaKnown RBP19.66■□□□□ 0.74
TM9SF4-206ENST00000479591 FAM9AQ8IZU1 332 aaPredicted RBP19.63■□□□□ 0.73
TM9SF4-206ENST00000479591 RUSC2Q8N2Y8 1516 aa19.61■□□□□ 0.73
TM9SF4-206ENST00000479591 KIF27Q86VH2 1401 aa19.6■□□□□ 0.73
TM9SF4-206ENST00000479591 ABCA10Q8WWZ4 1543 aa19.59■□□□□ 0.73
TM9SF4-206ENST00000479591 RAD54L2Q9Y4B4 1467 aa19.57■□□□□ 0.72
TM9SF4-206ENST00000479591 CSRNP3Q8WYN3 585 aa19.57■□□□□ 0.72
TM9SF4-206ENST00000479591 CUX2O14529 1486 aa19.56■□□□□ 0.72
TM9SF4-206ENST00000479591 WDR97A6NE52 1622 aa19.56■□□□□ 0.72
TM9SF4-206ENST00000479591 TARBP1Q13395 1621 aaKnown RBP19.53■□□□□ 0.72
TM9SF4-206ENST00000479591 IFT140Q96RY7 1462 aa19.5■□□□□ 0.71
TM9SF4-206ENST00000479591 KIF21BO75037 1637 aa19.47■□□□□ 0.71
TM9SF4-206ENST00000479591 LOC105371045A0A1W2PR82 267 aa19.46■□□□□ 0.71
TM9SF4-206ENST00000479591 ABCA5Q8WWZ7 1642 aa19.46■□□□□ 0.71
TM9SF4-206ENST00000479591 GOLGA3Q08378 1498 aa19.41■□□□□ 0.7
TM9SF4-206ENST00000479591 IGF1RP08069 1367 aa19.41■□□□□ 0.7
TM9SF4-206ENST00000479591 GAPVD1Q14C86 1478 aa19.41■□□□□ 0.7
TM9SF4-206ENST00000479591 PRXQ9BXM0 1461 aa19.41■□□□□ 0.7
TM9SF4-206ENST00000479591 TDRD9Q8NDG6 1382 aaKnown RBP19.39■□□□□ 0.69
TM9SF4-206ENST00000479591 ERICH3Q5RHP9 1530 aa19.39■□□□□ 0.69
TM9SF4-206ENST00000479591 DNAJC5Q9H3Z4 198 aa19.37■□□□□ 0.69
TM9SF4-206ENST00000479591 CUL7Q14999 1698 aa19.36■□□□□ 0.69
TM9SF4-206ENST00000479591 PBRM1Q86U86 1689 aa19.34■□□□□ 0.69
TM9SF4-206ENST00000479591 CARMIL1Q5VZK9 1371 aa19.32■□□□□ 0.68
TM9SF4-206ENST00000479591 ZNF608Q9ULD9 1512 aaPredicted RBP19.32■□□□□ 0.68
TM9SF4-206ENST00000479591 RAPGEF2Q9Y4G8 1499 aa19.32■□□□□ 0.68
TM9SF4-206ENST00000479591 EIF4G3O43432 1585 aaKnown RBP19.32■□□□□ 0.68
TM9SF4-206ENST00000479591 AQRO60306 1485 aaKnown RBP eCLIP19.31■□□□□ 0.688e-7■■■■■ 28.7
TM9SF4-206ENST00000479591 GRIN2BQ13224 1484 aa19.3■□□□□ 0.68
TM9SF4-206ENST00000479591 EHMT2Q96KQ7 1210 aa19.3■□□□□ 0.68
TM9SF4-206ENST00000479591 TNIKQ9UKE5 1360 aa19.3■□□□□ 0.68
TM9SF4-206ENST00000479591 UBTFP17480 764 aaKnown RBP19.27■□□□□ 0.68
TM9SF4-206ENST00000479591 ADAMTS12P58397 1594 aa19.22■□□□□ 0.67
TM9SF4-206ENST00000479591 FHAD1B1AJZ9 1412 aa19.21■□□□□ 0.67
TM9SF4-206ENST00000479591 MAGI1Q96QZ7 1491 aaPredicted RBP19.18■□□□□ 0.66
TM9SF4-206ENST00000479591 SNAPC4Q5SXM2 1469 aa19.17■□□□□ 0.66
TM9SF4-206ENST00000479591 CEP162Q5TB80 1403 aa19.15■□□□□ 0.66
TM9SF4-206ENST00000479591 CTTNBP2Q8WZ74 1663 aa19.1■□□□□ 0.65
TM9SF4-206ENST00000479591 SYNJ2O15056 1496 aa19.09■□□□□ 0.65
TM9SF4-206ENST00000479591 GRIN2AQ12879 1464 aa19.06■□□□□ 0.64
TM9SF4-206ENST00000479591 CLIP1P30622 1438 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms