RNA–Protein interactions for RNA: ENST00000479249.5

CUTA-207, Transcript of cutA divalent cation tolerance homolog, humanhuman

TSL 3

Gene CUTA, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUTA-207ENST00000479249 NISCHQ9Y2I1 1504 aa20.62■□□□□ 0.89
CUTA-207ENST00000479249 ABCC9O60706 1549 aa19.82■□□□□ 0.76
CUTA-207ENST00000479249 DNAJC5BQ9UF47 199 aa19.37■□□□□ 0.69
CUTA-207ENST00000479249 CCDC180Q9P1Z9 1646 aa19.01■□□□□ 0.63
CUTA-207ENST00000479249 DNAJC5Q9H3Z4 198 aa18.56■□□□□ 0.56
CUTA-207ENST00000479249 RB1CC1Q8TDY2 1594 aa18.53■□□□□ 0.56
CUTA-207ENST00000479249 PABPN1Q86U42 306 aaKnown RBP eCLIP18.25■□□□□ 0.51
CUTA-207ENST00000479249 NACADO15069 1562 aa18.16■□□□□ 0.5
CUTA-207ENST00000479249 UNC13AQ9UPW8 1703 aa18.1■□□□□ 0.49
CUTA-207ENST00000479249 CECR2Q9BXF3 1484 aa17.99■□□□□ 0.47
CUTA-207ENST00000479249 BICRAQ9NZM4 1560 aa17.97■□□□□ 0.47
CUTA-207ENST00000479249 CC2D2AQ9P2K1 1620 aa17.9■□□□□ 0.46
CUTA-207ENST00000479249 SHROOM4Q9ULL8 1493 aa17.74■□□□□ 0.43
CUTA-207ENST00000479249 DCAF8L2P0C7V8 631 aa17.73■□□□□ 0.43
CUTA-207ENST00000479249 EIF4G1Q04637 1599 aaKnown RBP17.64■□□□□ 0.41
CUTA-207ENST00000479249 MYO15BQ96JP2 1530 aa17.61■□□□□ 0.41
CUTA-207ENST00000479249 CUX2O14529 1486 aa17.56■□□□□ 0.4
CUTA-207ENST00000479249 TRIM41Q8WV44 630 aa17.33■□□□□ 0.36
CUTA-207ENST00000479249 ERCC6Q03468 1493 aa17.24■□□□□ 0.35
CUTA-207ENST00000479249 SCRIBQ14160 1630 aa17.18■□□□□ 0.34
CUTA-207ENST00000479249 DCAF1Q9Y4B6 1507 aa17.01■□□□□ 0.31
CUTA-207ENST00000479249 ZCCHC6Q5VYS8 1495 aaKnown RBP16.89■□□□□ 0.29
CUTA-207ENST00000479249 THOC2Q8NI27 1593 aaKnown RBP16.85■□□□□ 0.29
CUTA-207ENST00000479249 NESP48681 1621 aa16.74■□□□□ 0.27
CUTA-207ENST00000479249 NCAPD3P42695 1498 aa16.73■□□□□ 0.27
CUTA-207ENST00000479249 SMARCA2P51531 1590 aa16.64■□□□□ 0.25
CUTA-207ENST00000479249 BAZ1AQ9NRL2 1556 aaPredicted RBP16.61■□□□□ 0.25
CUTA-207ENST00000479249 AEBP2Q6ZN18 517 aaPredicted RBP16.59■□□□□ 0.25
CUTA-207ENST00000479249 HMGXB3Q12766 1538 aa16.57■□□□□ 0.24
CUTA-207ENST00000479249 KIF21AQ7Z4S6 1674 aa16.56■□□□□ 0.24
CUTA-207ENST00000479249 LAMC3Q9Y6N6 1575 aa16.56■□□□□ 0.24
CUTA-207ENST00000479249 ATAD2BQ9ULI0 1458 aa16.54■□□□□ 0.24
CUTA-207ENST00000479249 OSCARQ8IYS5 282 aa16.52■□□□□ 0.24
CUTA-207ENST00000479249 PDS5BQ9NTI5 1447 aa16.47■□□□□ 0.23
CUTA-207ENST00000479249 RIMBP3CA6NJZ7 1639 aa16.47■□□□□ 0.23
CUTA-207ENST00000479249 RIMBP3BA6NNM3 1639 aa16.47■□□□□ 0.23
CUTA-207ENST00000479249 RIMBP3Q9UFD9 1639 aa16.47■□□□□ 0.23
CUTA-207ENST00000479249 WDR62O43379 1518 aa16.4■□□□□ 0.22
CUTA-207ENST00000479249 MRC2Q9UBG0 1479 aa16.39■□□□□ 0.21
CUTA-207ENST00000479249 BAZ1BQ9UIG0 1483 aaKnown RBP16.35■□□□□ 0.21
CUTA-207ENST00000479249 TRHP20396 242 aaPredicted RBP16.33■□□□□ 0.2
CUTA-207ENST00000479249 SMARCA4P51532 1647 aa16.31■□□□□ 0.2
CUTA-207ENST00000479249 ARHGEF11O15085 1522 aa16.3■□□□□ 0.2
CUTA-207ENST00000479249 PEG3Q9GZU2 1588 aa16.18■□□□□ 0.18
CUTA-207ENST00000479249 CADPSQ9ULU8 1353 aa16.17■□□□□ 0.18
CUTA-207ENST00000479249 CYB5RLQ6IPT4 315 aa16.17■□□□□ 0.18
CUTA-207ENST00000479249 CEP164Q9UPV0 1460 aa16.14■□□□□ 0.17
CUTA-207ENST00000479249 ARAP1Q96P48 1450 aa16.06■□□□□ 0.16
CUTA-207ENST00000479249 ILDR1Q86SU0 546 aaPredicted RBP16.02■□□□□ 0.16
CUTA-207ENST00000479249 FANCD2Q9BXW9 1451 aa16■□□□□ 0.15
CUTA-207ENST00000479249 RSF1Q96T23 1441 aaPredicted RBP15.93■□□□□ 0.14
CUTA-207ENST00000479249 URB2Q14146 1524 aaKnown RBP15.92■□□□□ 0.14
CUTA-207ENST00000479249 CHD1O14646 1710 aa15.86■□□□□ 0.13
CUTA-207ENST00000479249 ZNF608Q9ULD9 1512 aaPredicted RBP15.86■□□□□ 0.13
CUTA-207ENST00000479249 IFT140Q96RY7 1462 aa15.84■□□□□ 0.13
CUTA-207ENST00000479249 MROH2BQ7Z745 1585 aa15.84■□□□□ 0.13
CUTA-207ENST00000479249 EIF4G3O43432 1585 aaKnown RBP15.79■□□□□ 0.12
CUTA-207ENST00000479249 CFTRP13569 1480 aa15.79■□□□□ 0.12
CUTA-207ENST00000479249 FBLN2P98095 1184 aa15.67■□□□□ 0.1
CUTA-207ENST00000479249 PRDM2Q13029 1718 aa15.65■□□□□ 0.1
CUTA-207ENST00000479249 CLASP1Q7Z460 1538 aa15.64■□□□□ 0.09
CUTA-207ENST00000479249 WIZO95785 1651 aa15.63■□□□□ 0.09
CUTA-207ENST00000479249 TOPBP1Q92547 1522 aa15.59■□□□□ 0.09
CUTA-207ENST00000479249 AQRO60306 1485 aaKnown RBP eCLIP15.59■□□□□ 0.093e-9■■■■■ 45.6
CUTA-207ENST00000479249 SYNJ1O43426 1573 aa15.58■□□□□ 0.08
CUTA-207ENST00000479249 TARBP1Q13395 1621 aaKnown RBP15.54■□□□□ 0.08
CUTA-207ENST00000479249 GAPVD1Q14C86 1478 aa15.54■□□□□ 0.08
CUTA-207ENST00000479249 ABCC8Q09428 1581 aa15.53■□□□□ 0.08
CUTA-207ENST00000479249 KDM4FA0A1W2PPD8 638 aa15.5■□□□□ 0.07
CUTA-207ENST00000479249 KIF13AQ9H1H9 1805 aa15.48■□□□□ 0.07
CUTA-207ENST00000479249 DNMBPQ6XZF7 1577 aa15.48■□□□□ 0.07
CUTA-207ENST00000479249 ERCC6L2Q5T890 1561 aa15.45■□□□□ 0.06
CUTA-207ENST00000479249 CHIC1Q5VXU3 224 aa15.44■□□□□ 0.06
CUTA-207ENST00000479249 SNAPC4Q5SXM2 1469 aa15.44■□□□□ 0.06
CUTA-207ENST00000479249 CHMP7Q8WUX9 453 aaPredicted RBP15.42■□□□□ 0.06
CUTA-207ENST00000479249 TOP2AP11388 1531 aaKnown RBP15.4■□□□□ 0.06
CUTA-207ENST00000479249 MAGI1Q96QZ7 1491 aaPredicted RBP15.4■□□□□ 0.06
CUTA-207ENST00000479249 WDR97A6NE52 1622 aa15.39■□□□□ 0.05
CUTA-207ENST00000479249 POLA1P09884 1462 aaPredicted RBP15.37■□□□□ 0.05
CUTA-207ENST00000479249 SYNJ2O15056 1496 aa15.34■□□□□ 0.05
CUTA-207ENST00000479249 HECW2Q9P2P5 1572 aa15.33■□□□□ 0.05
CUTA-207ENST00000479249 KDM6BO15054 1643 aa15.33■□□□□ 0.04
CUTA-207ENST00000479249 FBXO41Q8TF61 875 aa15.33■□□□□ 0.04
CUTA-207ENST00000479249 TDRD9Q8NDG6 1382 aaKnown RBP15.33■□□□□ 0.04
CUTA-207ENST00000479249 RAD54L2Q9Y4B4 1467 aa15.28■□□□□ 0.04
CUTA-207ENST00000479249 GRIN2BQ13224 1484 aa15.27■□□□□ 0.04
CUTA-207ENST00000479249 SOGA1O94964 1423 aa15.26■□□□□ 0.03
CUTA-207ENST00000479249 LMTK3Q96Q04 1460 aa15.26■□□□□ 0.03
CUTA-207ENST00000479249 ABCC10Q5T3U5 1492 aa15.23■□□□□ 0.03
CUTA-207ENST00000479249 FAM69CQ0P6D2 419 aa15.22■□□□□ 0.03
CUTA-207ENST00000479249 ADGRL1O94910 1474 aa15.21■□□□□ 0.03
CUTA-207ENST00000479249 CEP170Q5SW79 1584 aa15.19■□□□□ 0.02
CUTA-207ENST00000479249 DIP2BQ9P265 1576 aa15.19■□□□□ 0.02
CUTA-207ENST00000479249 PBRM1Q86U86 1689 aa15.19■□□□□ 0.02
CUTA-207ENST00000479249 CCDC88BA6NC98 1476 aa15.18■□□□□ 0.02
CUTA-207ENST00000479249 MAPKBP1O60336 1514 aa15.16■□□□□ 0.02
CUTA-207ENST00000479249 FGD5Q6ZNL6 1462 aa15.14■□□□□ 0.01
CUTA-207ENST00000479249 SHROOM2Q13796 1616 aa15.14■□□□□ 0.01
CUTA-207ENST00000479249 TSPOAP1O95153 1857 aa15.12■□□□□ 0.01
CUTA-207ENST00000479249 SOCS7O14512 581 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms