RNA–Protein interactions for RNA: ENST00000479238.1

WWTR1-209, Transcript of WW domain containing transcription regulator 1, humanhuman

TSL 3

Gene WWTR1, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WWTR1-209ENST00000479238 NISCHQ9Y2I1 1504 aa46.96■■■■■ 5.11
WWTR1-209ENST00000479238 CCDC180Q9P1Z9 1646 aa41.69■■■■■ 4.26
WWTR1-209ENST00000479238 ABCC9O60706 1549 aa40.91■■■■■ 4.14
WWTR1-209ENST00000479238 DCAF8L2P0C7V8 631 aa39.48■■■■□ 3.91
WWTR1-209ENST00000479238 RB1CC1Q8TDY2 1594 aa39.25■■■■□ 3.87
WWTR1-209ENST00000479238 NACADO15069 1562 aa39.16■■■■□ 3.86
WWTR1-209ENST00000479238 ZCCHC6Q5VYS8 1495 aaKnown RBP39.11■■■■□ 3.85
WWTR1-209ENST00000479238 MYO15BQ96JP2 1530 aa38.82■■■■□ 3.8
WWTR1-209ENST00000479238 DCAF1Q9Y4B6 1507 aa38.73■■■■□ 3.79
WWTR1-209ENST00000479238 UNC13AQ9UPW8 1703 aa38.47■■■■□ 3.75
WWTR1-209ENST00000479238 PABPN1Q86U42 306 aaKnown RBP eCLIP38.28■■■■□ 3.72
WWTR1-209ENST00000479238 SCRIBQ14160 1630 aa38.23■■■■□ 3.71
WWTR1-209ENST00000479238 BICRAQ9NZM4 1560 aa38.07■■■■□ 3.69
WWTR1-209ENST00000479238 SHROOM4Q9ULL8 1493 aa37.48■■■■□ 3.59
WWTR1-209ENST00000479238 DNAJC5BQ9UF47 199 aa37.46■■■■□ 3.59
WWTR1-209ENST00000479238 EIF4G1Q04637 1599 aaKnown RBP37.07■■■■□ 3.52
WWTR1-209ENST00000479238 CC2D2AQ9P2K1 1620 aa36.95■■■■□ 3.51
WWTR1-209ENST00000479238 CECR2Q9BXF3 1484 aa36.67■■■■□ 3.46
WWTR1-209ENST00000479238 SMARCA4P51532 1647 aa36.46■■■■□ 3.43
WWTR1-209ENST00000479238 BAZ1AQ9NRL2 1556 aaPredicted RBP36.39■■■■□ 3.42
WWTR1-209ENST00000479238 MROH2BQ7Z745 1585 aa36.27■■■■□ 3.4
WWTR1-209ENST00000479238 ATAD2BQ9ULI0 1458 aa36.22■■■■□ 3.39
WWTR1-209ENST00000479238 SMARCA2P51531 1590 aa36.15■■■■□ 3.38
WWTR1-209ENST00000479238 NCAPD3P42695 1498 aa36.12■■■■□ 3.37
WWTR1-209ENST00000479238 PEG3Q9GZU2 1588 aa35.98■■■■□ 3.35
WWTR1-209ENST00000479238 BAZ1BQ9UIG0 1483 aaKnown RBP35.97■■■■□ 3.35
WWTR1-209ENST00000479238 HMGXB3Q12766 1538 aa35.96■■■■□ 3.35
WWTR1-209ENST00000479238 WIZO95785 1651 aa35.94■■■■□ 3.34
WWTR1-209ENST00000479238 RSF1Q96T23 1441 aaPredicted RBP35.83■■■■□ 3.33
WWTR1-209ENST00000479238 TOP2AP11388 1531 aaKnown RBP35.45■■■■□ 3.27
WWTR1-209ENST00000479238 NESP48681 1621 aa35.42■■■■□ 3.26
WWTR1-209ENST00000479238 ERCC6Q03468 1493 aa35.23■■■■□ 3.23
WWTR1-209ENST00000479238 LAMC3Q9Y6N6 1575 aa35.2■■■■□ 3.23
WWTR1-209ENST00000479238 SUPT5HO00267 1087 aaKnown RBP35.19■■■■□ 3.22
WWTR1-209ENST00000479238 CADPSQ9ULU8 1353 aa35.13■■■■□ 3.21
WWTR1-209ENST00000479238 CCDC88BA6NC98 1476 aa35.07■■■■□ 3.2
WWTR1-209ENST00000479238 KIF21AQ7Z4S6 1674 aa35■■■■□ 3.19
WWTR1-209ENST00000479238 PDS5BQ9NTI5 1447 aa34.97■■■■□ 3.19
WWTR1-209ENST00000479238 CFTRP13569 1480 aa34.9■■■■□ 3.18
WWTR1-209ENST00000479238 THOC2Q8NI27 1593 aaKnown RBP34.78■■■■□ 3.16
WWTR1-209ENST00000479238 FANCD2Q9BXW9 1451 aa34.78■■■■□ 3.16
WWTR1-209ENST00000479238 PRDM2Q13029 1718 aa34.73■■■■□ 3.15
WWTR1-209ENST00000479238 CEP164Q9UPV0 1460 aa34.72■■■■□ 3.15
WWTR1-209ENST00000479238 CUX2O14529 1486 aa34.69■■■■□ 3.14
WWTR1-209ENST00000479238 MRC2Q9UBG0 1479 aa34.64■■■■□ 3.14
WWTR1-209ENST00000479238 WDR62O43379 1518 aa34.49■■■■□ 3.11
WWTR1-209ENST00000479238 URB2Q14146 1524 aaKnown RBP34.43■■■■□ 3.1
WWTR1-209ENST00000479238 TOPBP1Q92547 1522 aa34.22■■■■□ 3.07
WWTR1-209ENST00000479238 DNMBPQ6XZF7 1577 aa34.17■■■■□ 3.06
WWTR1-209ENST00000479238 ABCC8Q09428 1581 aa34.12■■■■□ 3.05
WWTR1-209ENST00000479238 CUX1P39880 1505 aa34.01■■■■□ 3.04
WWTR1-209ENST00000479238 IFT140Q96RY7 1462 aa33.95■■■■□ 3.02
WWTR1-209ENST00000479238 POLA1P09884 1462 aaPredicted RBP33.93■■■■□ 3.02
WWTR1-209ENST00000479238 FGD5Q6ZNL6 1462 aa33.89■■■■□ 3.02
WWTR1-209ENST00000479238 ZNF608Q9ULD9 1512 aaPredicted RBP33.88■■■■□ 3.01
WWTR1-209ENST00000479238 RAD54L2Q9Y4B4 1467 aa33.86■■■■□ 3.01
WWTR1-209ENST00000479238 TARBP1Q13395 1621 aaKnown RBP33.82■■■■□ 3.01
WWTR1-209ENST00000479238 SOGA1O94964 1423 aa33.81■■■■□ 3
WWTR1-209ENST00000479238 WRNQ14191 1432 aaPredicted RBP eCLIP33.8■■■■□ 3
WWTR1-209ENST00000479238 SYNJ1O43426 1573 aa33.76■■■□□ 2.99
WWTR1-209ENST00000479238 EIF4G3O43432 1585 aaKnown RBP33.73■■■□□ 2.99
WWTR1-209ENST00000479238 AQRO60306 1485 aaKnown RBP eCLIP33.7■■■□□ 2.993e-6■■□□□ 13.8
WWTR1-209ENST00000479238 BIVM-ERCC5R4GMW8 1640 aa33.7■■■□□ 2.99
WWTR1-209ENST00000479238 TOP2BQ02880 1626 aa33.69■■■□□ 2.98
WWTR1-209ENST00000479238 TDRD9Q8NDG6 1382 aaKnown RBP33.67■■■□□ 2.98
WWTR1-209ENST00000479238 DNAJC5Q9H3Z4 198 aa33.6■■■□□ 2.97
WWTR1-209ENST00000479238 WDR97A6NE52 1622 aa33.57■■■□□ 2.97
WWTR1-209ENST00000479238 ABCA10Q8WWZ4 1543 aa33.48■■■□□ 2.95
WWTR1-209ENST00000479238 GAPVD1Q14C86 1478 aa33.41■■■□□ 2.94
WWTR1-209ENST00000479238 PBRM1Q86U86 1689 aa33.4■■■□□ 2.94
WWTR1-209ENST00000479238 FBLN2P98095 1184 aa33.39■■■□□ 2.94
WWTR1-209ENST00000479238 SNAPC4Q5SXM2 1469 aa33.38■■■□□ 2.93
WWTR1-209ENST00000479238 ABCA5Q8WWZ7 1642 aa33.38■■■□□ 2.93
WWTR1-209ENST00000479238 GRIN2BQ13224 1484 aa33.37■■■□□ 2.93
WWTR1-209ENST00000479238 CHD1O14646 1710 aa33.36■■■□□ 2.93
WWTR1-209ENST00000479238 OSCARQ8IYS5 282 aa33.35■■■□□ 2.93
WWTR1-209ENST00000479238 MAGI1Q96QZ7 1491 aaPredicted RBP33.25■■■□□ 2.91
WWTR1-209ENST00000479238 CHMP7Q8WUX9 453 aaPredicted RBP33.21■■■□□ 2.91
WWTR1-209ENST00000479238 SYNJ2O15056 1496 aa33.14■■■□□ 2.9
WWTR1-209ENST00000479238 TRIM41Q8WV44 630 aa33.13■■■□□ 2.89
WWTR1-209ENST00000479238 ADAMTS12P58397 1594 aa33.09■■■□□ 2.89
WWTR1-209ENST00000479238 ERICH3Q5RHP9 1530 aa33.07■■■□□ 2.89
WWTR1-209ENST00000479238 KIF27Q86VH2 1401 aa33.07■■■□□ 2.88
WWTR1-209ENST00000479238 FHAD1B1AJZ9 1412 aa32.99■■■□□ 2.87
WWTR1-209ENST00000479238 GRIN2AQ12879 1464 aa32.95■■■□□ 2.87
WWTR1-209ENST00000479238 IGF1RP08069 1367 aa32.92■■■□□ 2.86
WWTR1-209ENST00000479238 RUSC2Q8N2Y8 1516 aa32.91■■■□□ 2.86
WWTR1-209ENST00000479238 CLASP1Q7Z460 1538 aa32.87■■■□□ 2.85
WWTR1-209ENST00000479238 RIMBP3CA6NJZ7 1639 aa32.85■■■□□ 2.85
WWTR1-209ENST00000479238 RIMBP3BA6NNM3 1639 aa32.85■■■□□ 2.85
WWTR1-209ENST00000479238 RIMBP3Q9UFD9 1639 aa32.85■■■□□ 2.85
WWTR1-209ENST00000479238 CEP170Q5SW79 1584 aa32.83■■■□□ 2.85
WWTR1-209ENST00000479238 CUL7Q14999 1698 aa32.83■■■□□ 2.85
WWTR1-209ENST00000479238 ARHGEF11O15085 1522 aa32.81■■■□□ 2.84
WWTR1-209ENST00000479238 CARMIL1Q5VZK9 1371 aa32.76■■■□□ 2.83
WWTR1-209ENST00000479238 CHIC1Q5VXU3 224 aa32.76■■■□□ 2.83
WWTR1-209ENST00000479238 NUP160Q12769 1436 aa32.76■■■□□ 2.83
WWTR1-209ENST00000479238 CYB5RLQ6IPT4 315 aa32.59■■■□□ 2.81
WWTR1-209ENST00000479238 FAM9AQ8IZU1 332 aaPredicted RBP32.59■■■□□ 2.81
WWTR1-209ENST00000479238 ARAP1Q96P48 1450 aa32.57■■■□□ 2.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms