RNA–Protein interactions for RNA: ENST00000479169.5

HDLBP-237, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 1,017 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-237ENST00000479169 NISCHQ9Y2I1 1504 aa27.99■■■□□ 2.07
HDLBP-237ENST00000479169 ABCC9O60706 1549 aa25.42■■□□□ 1.66
HDLBP-237ENST00000479169 CCDC180Q9P1Z9 1646 aa25.22■■□□□ 1.63
HDLBP-237ENST00000479169 RB1CC1Q8TDY2 1594 aa24.08■■□□□ 1.44
HDLBP-237ENST00000479169 DNAJC5BQ9UF47 199 aa24.02■■□□□ 1.44
HDLBP-237ENST00000479169 NACADO15069 1562 aa23.86■■□□□ 1.41
HDLBP-237ENST00000479169 DCAF8L2P0C7V8 631 aa23.71■■□□□ 1.39
HDLBP-237ENST00000479169 UNC13AQ9UPW8 1703 aa23.64■■□□□ 1.38
HDLBP-237ENST00000479169 PABPN1Q86U42 306 aaKnown RBP eCLIP23.63■■□□□ 1.37
HDLBP-237ENST00000479169 BICRAQ9NZM4 1560 aa23.44■■□□□ 1.34
HDLBP-237ENST00000479169 MYO15BQ96JP2 1530 aa23.42■■□□□ 1.34
HDLBP-237ENST00000479169 ZCCHC6Q5VYS8 1495 aaKnown RBP23.17■■□□□ 1.3
HDLBP-237ENST00000479169 DCAF1Q9Y4B6 1507 aa23.08■■□□□ 1.28
HDLBP-237ENST00000479169 SCRIBQ14160 1630 aa23.01■■□□□ 1.27
HDLBP-237ENST00000479169 SHROOM4Q9ULL8 1493 aa22.99■■□□□ 1.27
HDLBP-237ENST00000479169 CC2D2AQ9P2K1 1620 aa22.96■■□□□ 1.27
HDLBP-237ENST00000479169 CECR2Q9BXF3 1484 aa22.89■■□□□ 1.25
HDLBP-237ENST00000479169 EIF4G1Q04637 1599 aaKnown RBP22.84■■□□□ 1.25
HDLBP-237ENST00000479169 DNAJC5Q9H3Z4 198 aa22.14■■□□□ 1.13
HDLBP-237ENST00000479169 NCAPD3P42695 1498 aa22.02■■□□□ 1.12
HDLBP-237ENST00000479169 ATAD2BQ9ULI0 1458 aa21.95■■□□□ 1.1
HDLBP-237ENST00000479169 CUX2O14529 1486 aa21.94■■□□□ 1.1
HDLBP-237ENST00000479169 ERCC6Q03468 1493 aa21.94■■□□□ 1.1
HDLBP-237ENST00000479169 SMARCA4P51532 1647 aa21.91■■□□□ 1.1
HDLBP-237ENST00000479169 SMARCA2P51531 1590 aa21.87■■□□□ 1.09
HDLBP-237ENST00000479169 HMGXB3Q12766 1538 aa21.85■■□□□ 1.09
HDLBP-237ENST00000479169 NESP48681 1621 aa21.8■■□□□ 1.08
HDLBP-237ENST00000479169 BAZ1AQ9NRL2 1556 aaPredicted RBP21.73■■□□□ 1.07
HDLBP-237ENST00000479169 BAZ1BQ9UIG0 1483 aaKnown RBP21.72■■□□□ 1.07
HDLBP-237ENST00000479169 PEG3Q9GZU2 1588 aa21.66■■□□□ 1.06
HDLBP-237ENST00000479169 THOC2Q8NI27 1593 aaKnown RBP21.62■■□□□ 1.05
HDLBP-237ENST00000479169 MROH2BQ7Z745 1585 aa21.6■■□□□ 1.05
HDLBP-237ENST00000479169 LAMC3Q9Y6N6 1575 aa21.57■■□□□ 1.04
HDLBP-237ENST00000479169 KIF21AQ7Z4S6 1674 aa21.55■■□□□ 1.04
HDLBP-237ENST00000479169 PDS5BQ9NTI5 1447 aa21.42■■□□□ 1.02
HDLBP-237ENST00000479169 WIZO95785 1651 aa21.36■■□□□ 1.01
HDLBP-237ENST00000479169 CADPSQ9ULU8 1353 aa21.33■■□□□ 1
HDLBP-237ENST00000479169 MRC2Q9UBG0 1479 aa21.28■■□□□ 1
HDLBP-237ENST00000479169 WDR62O43379 1518 aa21.24■□□□□ 0.99
HDLBP-237ENST00000479169 CEP164Q9UPV0 1460 aa21.17■□□□□ 0.98
HDLBP-237ENST00000479169 TRIM41Q8WV44 630 aa21.14■□□□□ 0.97
HDLBP-237ENST00000479169 FANCD2Q9BXW9 1451 aa21.13■□□□□ 0.97
HDLBP-237ENST00000479169 CFTRP13569 1480 aa21.07■□□□□ 0.96
HDLBP-237ENST00000479169 RSF1Q96T23 1441 aaPredicted RBP21.04■□□□□ 0.96
HDLBP-237ENST00000479169 TOP2AP11388 1531 aaKnown RBP21.04■□□□□ 0.96
HDLBP-237ENST00000479169 URB2Q14146 1524 aaKnown RBP20.99■□□□□ 0.95
HDLBP-237ENST00000479169 PRDM2Q13029 1718 aa20.92■□□□□ 0.94
HDLBP-237ENST00000479169 OSCARQ8IYS5 282 aa20.88■□□□□ 0.93
HDLBP-237ENST00000479169 CCDC88BA6NC98 1476 aa20.79■□□□□ 0.92
HDLBP-237ENST00000479169 ZNF608Q9ULD9 1512 aaPredicted RBP20.76■□□□□ 0.91
HDLBP-237ENST00000479169 IFT140Q96RY7 1462 aa20.73■□□□□ 0.91
HDLBP-237ENST00000479169 RIMBP3CA6NJZ7 1639 aa20.72■□□□□ 0.91
HDLBP-237ENST00000479169 RIMBP3BA6NNM3 1639 aa20.72■□□□□ 0.91
HDLBP-237ENST00000479169 RIMBP3Q9UFD9 1639 aa20.72■□□□□ 0.91
HDLBP-237ENST00000479169 TOPBP1Q92547 1522 aa20.71■□□□□ 0.91
HDLBP-237ENST00000479169 EIF4G3O43432 1585 aaKnown RBP20.65■□□□□ 0.9
HDLBP-237ENST00000479169 DNMBPQ6XZF7 1577 aa20.62■□□□□ 0.89
HDLBP-237ENST00000479169 ARHGEF11O15085 1522 aa20.61■□□□□ 0.89
HDLBP-237ENST00000479169 ABCC8Q09428 1581 aa20.59■□□□□ 0.89
HDLBP-237ENST00000479169 CHD1O14646 1710 aa20.57■□□□□ 0.88
HDLBP-237ENST00000479169 TARBP1Q13395 1621 aaKnown RBP20.56■□□□□ 0.88
HDLBP-237ENST00000479169 AQRO60306 1485 aaKnown RBP eCLIP20.54■□□□□ 0.881e-14■■■■□ 23.9
HDLBP-237ENST00000479169 POLA1P09884 1462 aaPredicted RBP20.49■□□□□ 0.87
HDLBP-237ENST00000479169 CYB5RLQ6IPT4 315 aa20.45■□□□□ 0.86
HDLBP-237ENST00000479169 RAD54L2Q9Y4B4 1467 aa20.43■□□□□ 0.86
HDLBP-237ENST00000479169 FBLN2P98095 1184 aa20.42■□□□□ 0.86
HDLBP-237ENST00000479169 ARAP1Q96P48 1450 aa20.41■□□□□ 0.86
HDLBP-237ENST00000479169 SOGA1O94964 1423 aa20.36■□□□□ 0.85
HDLBP-237ENST00000479169 TDRD9Q8NDG6 1382 aaKnown RBP20.36■□□□□ 0.85
HDLBP-237ENST00000479169 FGD5Q6ZNL6 1462 aa20.34■□□□□ 0.85
HDLBP-237ENST00000479169 SNAPC4Q5SXM2 1469 aa20.33■□□□□ 0.85
HDLBP-237ENST00000479169 CUX1P39880 1505 aa20.31■□□□□ 0.84
HDLBP-237ENST00000479169 WDR97A6NE52 1622 aa20.28■□□□□ 0.84
HDLBP-237ENST00000479169 CLASP1Q7Z460 1538 aa20.27■□□□□ 0.84
HDLBP-237ENST00000479169 TRHP20396 242 aaPredicted RBP20.27■□□□□ 0.84
HDLBP-237ENST00000479169 MAGI1Q96QZ7 1491 aaPredicted RBP20.23■□□□□ 0.83
HDLBP-237ENST00000479169 SYNJ1O43426 1573 aa20.22■□□□□ 0.83
HDLBP-237ENST00000479169 CHMP7Q8WUX9 453 aaPredicted RBP20.21■□□□□ 0.83
HDLBP-237ENST00000479169 GRIN2BQ13224 1484 aa20.21■□□□□ 0.83
HDLBP-237ENST00000479169 PBRM1Q86U86 1689 aa20.2■□□□□ 0.82
HDLBP-237ENST00000479169 SYNJ2O15056 1496 aa20.17■□□□□ 0.82
HDLBP-237ENST00000479169 GAPVD1Q14C86 1478 aa20.12■□□□□ 0.81
HDLBP-237ENST00000479169 ABCA5Q8WWZ7 1642 aa20.1■□□□□ 0.81
HDLBP-237ENST00000479169 ABCA10Q8WWZ4 1543 aa20.07■□□□□ 0.8
HDLBP-237ENST00000479169 SUPT5HO00267 1087 aaKnown RBP19.99■□□□□ 0.79
HDLBP-237ENST00000479169 ERCC6L2Q5T890 1561 aa19.99■□□□□ 0.79
HDLBP-237ENST00000479169 GRIN2AQ12879 1464 aa19.97■□□□□ 0.79
HDLBP-237ENST00000479169 ADAMTS12P58397 1594 aa19.96■□□□□ 0.79
HDLBP-237ENST00000479169 CEP170Q5SW79 1584 aa19.95■□□□□ 0.78
HDLBP-237ENST00000479169 WRNQ14191 1432 aaPredicted RBP eCLIP19.93■□□□□ 0.78
HDLBP-237ENST00000479169 BIVM-ERCC5R4GMW8 1640 aa19.93■□□□□ 0.78
HDLBP-237ENST00000479169 TOP2BQ02880 1626 aa19.91■□□□□ 0.78
HDLBP-237ENST00000479169 NUP160Q12769 1436 aa19.9■□□□□ 0.78
HDLBP-237ENST00000479169 SHROOM2Q13796 1616 aa19.86■□□□□ 0.77
HDLBP-237ENST00000479169 FHAD1B1AJZ9 1412 aa19.85■□□□□ 0.77
HDLBP-237ENST00000479169 ERICH3Q5RHP9 1530 aa19.81■□□□□ 0.76
HDLBP-237ENST00000479169 AEBP2Q6ZN18 517 aaPredicted RBP19.81■□□□□ 0.76
HDLBP-237ENST00000479169 KIF13AQ9H1H9 1805 aa19.75■□□□□ 0.75
HDLBP-237ENST00000479169 PRG4Q92954 1404 aaPredicted RBP19.72■□□□□ 0.75
HDLBP-237ENST00000479169 RUSC2Q8N2Y8 1516 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms