RNA–Protein interactions for RNA: ENST00000479146.1

PDHA1-209, Transcript of pyruvate dehydrogenase E1 alpha 1 subunit, humanhuman

TSL 2

Gene PDHA1, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDHA1-209ENST00000479146 NISCHQ9Y2I1 1504 aa32.5■■■□□ 2.79
PDHA1-209ENST00000479146 ABCC9O60706 1549 aa29.46■■■□□ 2.31
PDHA1-209ENST00000479146 CCDC180Q9P1Z9 1646 aa29.35■■■□□ 2.29
PDHA1-209ENST00000479146 RB1CC1Q8TDY2 1594 aa28.03■■■□□ 2.08
PDHA1-209ENST00000479146 NACADO15069 1562 aa27.77■■■□□ 2.04
PDHA1-209ENST00000479146 DNAJC5BQ9UF47 199 aa27.74■■■□□ 2.03
PDHA1-209ENST00000479146 DCAF8L2P0C7V8 631 aa27.41■■□□□ 1.98
PDHA1-209ENST00000479146 UNC13AQ9UPW8 1703 aa27.34■■□□□ 1.97
PDHA1-209ENST00000479146 MYO15BQ96JP2 1530 aa27.34■■□□□ 1.97
PDHA1-209ENST00000479146 PABPN1Q86U42 306 aaKnown RBP eCLIP27.32■■□□□ 1.96
PDHA1-209ENST00000479146 BICRAQ9NZM4 1560 aa27.16■■□□□ 1.94
PDHA1-209ENST00000479146 ZCCHC6Q5VYS8 1495 aaKnown RBP26.91■■□□□ 1.9
PDHA1-209ENST00000479146 SHROOM4Q9ULL8 1493 aa26.91■■□□□ 1.9
PDHA1-209ENST00000479146 DCAF1Q9Y4B6 1507 aa26.89■■□□□ 1.89
PDHA1-209ENST00000479146 SCRIBQ14160 1630 aa26.65■■□□□ 1.86
PDHA1-209ENST00000479146 CC2D2AQ9P2K1 1620 aa26.64■■□□□ 1.85
PDHA1-209ENST00000479146 CECR2Q9BXF3 1484 aa26.61■■□□□ 1.85
PDHA1-209ENST00000479146 EIF4G1Q04637 1599 aaKnown RBP26.54■■□□□ 1.84
PDHA1-209ENST00000479146 DNAJC5Q9H3Z4 198 aa25.73■■□□□ 1.71
PDHA1-209ENST00000479146 NCAPD3P42695 1498 aa25.6■■□□□ 1.69
PDHA1-209ENST00000479146 CUX2O14529 1486 aa25.59■■□□□ 1.69
PDHA1-209ENST00000479146 ERCC6Q03468 1493 aa25.52■■□□□ 1.68
PDHA1-209ENST00000479146 ATAD2BQ9ULI0 1458 aa25.47■■□□□ 1.67
PDHA1-209ENST00000479146 SMARCA2P51531 1590 aa25.46■■□□□ 1.67
PDHA1-209ENST00000479146 HMGXB3Q12766 1538 aa25.45■■□□□ 1.66
PDHA1-209ENST00000479146 SMARCA4P51532 1647 aa25.42■■□□□ 1.66
PDHA1-209ENST00000479146 BAZ1AQ9NRL2 1556 aaPredicted RBP25.28■■□□□ 1.64
PDHA1-209ENST00000479146 BAZ1BQ9UIG0 1483 aaKnown RBP25.25■■□□□ 1.63
PDHA1-209ENST00000479146 NESP48681 1621 aa25.23■■□□□ 1.63
PDHA1-209ENST00000479146 PEG3Q9GZU2 1588 aa25.2■■□□□ 1.62
PDHA1-209ENST00000479146 LAMC3Q9Y6N6 1575 aa25.11■■□□□ 1.61
PDHA1-209ENST00000479146 THOC2Q8NI27 1593 aaKnown RBP25.1■■□□□ 1.61
PDHA1-209ENST00000479146 MROH2BQ7Z745 1585 aa25.01■■□□□ 1.59
PDHA1-209ENST00000479146 KIF21AQ7Z4S6 1674 aa24.95■■□□□ 1.58
PDHA1-209ENST00000479146 PDS5BQ9NTI5 1447 aa24.95■■□□□ 1.58
PDHA1-209ENST00000479146 CADPSQ9ULU8 1353 aa24.8■■□□□ 1.56
PDHA1-209ENST00000479146 MRC2Q9UBG0 1479 aa24.76■■□□□ 1.55
PDHA1-209ENST00000479146 WDR62O43379 1518 aa24.71■■□□□ 1.55
PDHA1-209ENST00000479146 WIZO95785 1651 aa24.69■■□□□ 1.54
PDHA1-209ENST00000479146 CEP164Q9UPV0 1460 aa24.61■■□□□ 1.53
PDHA1-209ENST00000479146 FANCD2Q9BXW9 1451 aa24.53■■□□□ 1.52
PDHA1-209ENST00000479146 CFTRP13569 1480 aa24.49■■□□□ 1.51
PDHA1-209ENST00000479146 TRIM41Q8WV44 630 aa24.48■■□□□ 1.51
PDHA1-209ENST00000479146 TOP2AP11388 1531 aaKnown RBP24.43■■□□□ 1.5
PDHA1-209ENST00000479146 RSF1Q96T23 1441 aaPredicted RBP24.4■■□□□ 1.5
PDHA1-209ENST00000479146 URB2Q14146 1524 aaKnown RBP24.33■■□□□ 1.49
PDHA1-209ENST00000479146 PRDM2Q13029 1718 aa24.29■■□□□ 1.48
PDHA1-209ENST00000479146 OSCARQ8IYS5 282 aa24.28■■□□□ 1.48
PDHA1-209ENST00000479146 IFT140Q96RY7 1462 aa24.13■■□□□ 1.45
PDHA1-209ENST00000479146 CCDC88BA6NC98 1476 aa24.08■■□□□ 1.45
PDHA1-209ENST00000479146 ZNF608Q9ULD9 1512 aaPredicted RBP24.05■■□□□ 1.44
PDHA1-209ENST00000479146 RIMBP3CA6NJZ7 1639 aa24.04■■□□□ 1.44
PDHA1-209ENST00000479146 RIMBP3BA6NNM3 1639 aa24.04■■□□□ 1.44
PDHA1-209ENST00000479146 RIMBP3Q9UFD9 1639 aa24.04■■□□□ 1.44
PDHA1-209ENST00000479146 TOPBP1Q92547 1522 aa24.04■■□□□ 1.44
PDHA1-209ENST00000479146 ABCC8Q09428 1581 aa24.02■■□□□ 1.44
PDHA1-209ENST00000479146 EIF4G3O43432 1585 aaKnown RBP23.98■■□□□ 1.43
PDHA1-209ENST00000479146 DNMBPQ6XZF7 1577 aa23.97■■□□□ 1.43
PDHA1-209ENST00000479146 ARHGEF11O15085 1522 aa23.94■■□□□ 1.42
PDHA1-209ENST00000479146 TARBP1Q13395 1621 aaKnown RBP23.85■■□□□ 1.41
PDHA1-209ENST00000479146 CHD1O14646 1710 aa23.82■■□□□ 1.4
PDHA1-209ENST00000479146 AQRO60306 1485 aaKnown RBP eCLIP23.79■■□□□ 1.43e-12■■□□□ 11.7
PDHA1-209ENST00000479146 POLA1P09884 1462 aaPredicted RBP23.78■■□□□ 1.4
PDHA1-209ENST00000479146 CYB5RLQ6IPT4 315 aa23.69■■□□□ 1.38
PDHA1-209ENST00000479146 WDR97A6NE52 1622 aa23.69■■□□□ 1.38
PDHA1-209ENST00000479146 ARAP1Q96P48 1450 aa23.68■■□□□ 1.38
PDHA1-209ENST00000479146 FBLN2P98095 1184 aa23.66■■□□□ 1.38
PDHA1-209ENST00000479146 RAD54L2Q9Y4B4 1467 aa23.64■■□□□ 1.38
PDHA1-209ENST00000479146 SOGA1O94964 1423 aa23.64■■□□□ 1.37
PDHA1-209ENST00000479146 TDRD9Q8NDG6 1382 aaKnown RBP23.6■■□□□ 1.37
PDHA1-209ENST00000479146 SNAPC4Q5SXM2 1469 aa23.59■■□□□ 1.37
PDHA1-209ENST00000479146 FGD5Q6ZNL6 1462 aa23.59■■□□□ 1.37
PDHA1-209ENST00000479146 MAGI1Q96QZ7 1491 aaPredicted RBP23.56■■□□□ 1.36
PDHA1-209ENST00000479146 CLASP1Q7Z460 1538 aa23.55■■□□□ 1.36
PDHA1-209ENST00000479146 SYNJ1O43426 1573 aa23.55■■□□□ 1.36
PDHA1-209ENST00000479146 TRHP20396 242 aaPredicted RBP23.53■■□□□ 1.36
PDHA1-209ENST00000479146 CUX1P39880 1505 aa23.52■■□□□ 1.36
PDHA1-209ENST00000479146 GRIN2BQ13224 1484 aa23.51■■□□□ 1.35
PDHA1-209ENST00000479146 CHMP7Q8WUX9 453 aaPredicted RBP23.48■■□□□ 1.35
PDHA1-209ENST00000479146 SYNJ2O15056 1496 aa23.47■■□□□ 1.35
PDHA1-209ENST00000479146 PBRM1Q86U86 1689 aa23.41■■□□□ 1.34
PDHA1-209ENST00000479146 GAPVD1Q14C86 1478 aa23.37■■□□□ 1.33
PDHA1-209ENST00000479146 ABCA5Q8WWZ7 1642 aa23.34■■□□□ 1.33
PDHA1-209ENST00000479146 ABCA10Q8WWZ4 1543 aa23.33■■□□□ 1.33
PDHA1-209ENST00000479146 GRIN2AQ12879 1464 aa23.2■■□□□ 1.3
PDHA1-209ENST00000479146 WRNQ14191 1432 aaPredicted RBP eCLIP23.19■■□□□ 1.3
PDHA1-209ENST00000479146 ADAMTS12P58397 1594 aa23.18■■□□□ 1.3
PDHA1-209ENST00000479146 BIVM-ERCC5R4GMW8 1640 aa23.13■■□□□ 1.29
PDHA1-209ENST00000479146 NUP160Q12769 1436 aa23.13■■□□□ 1.29
PDHA1-209ENST00000479146 TOP2BQ02880 1626 aa23.12■■□□□ 1.29
PDHA1-209ENST00000479146 CEP170Q5SW79 1584 aa23.12■■□□□ 1.29
PDHA1-209ENST00000479146 ERCC6L2Q5T890 1561 aa23.1■■□□□ 1.29
PDHA1-209ENST00000479146 FHAD1B1AJZ9 1412 aa23.08■■□□□ 1.29
PDHA1-209ENST00000479146 SHROOM2Q13796 1616 aa23.08■■□□□ 1.28
PDHA1-209ENST00000479146 SUPT5HO00267 1087 aaKnown RBP23.06■■□□□ 1.28
PDHA1-209ENST00000479146 ERICH3Q5RHP9 1530 aa23.05■■□□□ 1.28
PDHA1-209ENST00000479146 AEBP2Q6ZN18 517 aaPredicted RBP23.05■■□□□ 1.28
PDHA1-209ENST00000479146 PRG4Q92954 1404 aaPredicted RBP22.9■■□□□ 1.26
PDHA1-209ENST00000479146 RUSC2Q8N2Y8 1516 aa22.87■■□□□ 1.25
PDHA1-209ENST00000479146 KIF13AQ9H1H9 1805 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms