RNA–Protein interactions for RNA: ENST00000478901.1

CDK11A-215, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 5

Gene CDK11A, Length 931 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-215ENST00000478901 NISCHQ9Y2I1 1504 aa41.64■■■■■ 4.26
CDK11A-215ENST00000478901 CCDC180Q9P1Z9 1646 aa36.9■■■■□ 3.5
CDK11A-215ENST00000478901 ABCC9O60706 1549 aa35.95■■■■□ 3.35
CDK11A-215ENST00000478901 ZCCHC6Q5VYS8 1495 aaKnown RBP34.71■■■■□ 3.15
CDK11A-215ENST00000478901 DCAF8L2P0C7V8 631 aa34.71■■■■□ 3.15
CDK11A-215ENST00000478901 NACADO15069 1562 aa34.65■■■■□ 3.14
CDK11A-215ENST00000478901 RB1CC1Q8TDY2 1594 aa34.63■■■■□ 3.13
CDK11A-215ENST00000478901 MYO15BQ96JP2 1530 aa34.5■■■■□ 3.11
CDK11A-215ENST00000478901 DCAF1Q9Y4B6 1507 aa34.44■■■■□ 3.1
CDK11A-215ENST00000478901 UNC13AQ9UPW8 1703 aa33.9■■■■□ 3.02
CDK11A-215ENST00000478901 SCRIBQ14160 1630 aa33.71■■■□□ 2.99
CDK11A-215ENST00000478901 PABPN1Q86U42 306 aaKnown RBP eCLIP33.65■■■□□ 2.98
CDK11A-215ENST00000478901 BICRAQ9NZM4 1560 aa33.64■■■□□ 2.98
CDK11A-215ENST00000478901 SHROOM4Q9ULL8 1493 aa33.22■■■□□ 2.91
CDK11A-215ENST00000478901 DNAJC5BQ9UF47 199 aa32.88■■■□□ 2.85
CDK11A-215ENST00000478901 EIF4G1Q04637 1599 aaKnown RBP32.7■■■□□ 2.83
CDK11A-215ENST00000478901 CC2D2AQ9P2K1 1620 aa32.52■■■□□ 2.8
CDK11A-215ENST00000478901 CECR2Q9BXF3 1484 aa32.44■■■□□ 2.78
CDK11A-215ENST00000478901 SMARCA4P51532 1647 aa32.26■■■□□ 2.76
CDK11A-215ENST00000478901 BAZ1AQ9NRL2 1556 aaPredicted RBP32.23■■■□□ 2.75
CDK11A-215ENST00000478901 MROH2BQ7Z745 1585 aa32.11■■■□□ 2.73
CDK11A-215ENST00000478901 ATAD2BQ9ULI0 1458 aa32.03■■■□□ 2.72
CDK11A-215ENST00000478901 NCAPD3P42695 1498 aa31.99■■■□□ 2.71
CDK11A-215ENST00000478901 SMARCA2P51531 1590 aa31.98■■■□□ 2.71
CDK11A-215ENST00000478901 PEG3Q9GZU2 1588 aa31.94■■■□□ 2.7
CDK11A-215ENST00000478901 HMGXB3Q12766 1538 aa31.83■■■□□ 2.69
CDK11A-215ENST00000478901 RSF1Q96T23 1441 aaPredicted RBP31.81■■■□□ 2.68
CDK11A-215ENST00000478901 WIZO95785 1651 aa31.77■■■□□ 2.68
CDK11A-215ENST00000478901 BAZ1BQ9UIG0 1483 aaKnown RBP31.77■■■□□ 2.68
CDK11A-215ENST00000478901 TOP2AP11388 1531 aaKnown RBP31.42■■■□□ 2.62
CDK11A-215ENST00000478901 NESP48681 1621 aa31.19■■■□□ 2.58
CDK11A-215ENST00000478901 SUPT5HO00267 1087 aaKnown RBP31.15■■■□□ 2.58
CDK11A-215ENST00000478901 LAMC3Q9Y6N6 1575 aa31.1■■■□□ 2.57
CDK11A-215ENST00000478901 CCDC88BA6NC98 1476 aa31.08■■■□□ 2.57
CDK11A-215ENST00000478901 CADPSQ9ULU8 1353 aa31.06■■■□□ 2.56
CDK11A-215ENST00000478901 ERCC6Q03468 1493 aa30.94■■■□□ 2.54
CDK11A-215ENST00000478901 CFTRP13569 1480 aa30.93■■■□□ 2.54
CDK11A-215ENST00000478901 PDS5BQ9NTI5 1447 aa30.88■■■□□ 2.53
CDK11A-215ENST00000478901 KIF21AQ7Z4S6 1674 aa30.81■■■□□ 2.52
CDK11A-215ENST00000478901 FANCD2Q9BXW9 1451 aa30.7■■■□□ 2.51
CDK11A-215ENST00000478901 PRDM2Q13029 1718 aa30.7■■■□□ 2.5
CDK11A-215ENST00000478901 THOC2Q8NI27 1593 aaKnown RBP30.65■■■□□ 2.5
CDK11A-215ENST00000478901 CEP164Q9UPV0 1460 aa30.63■■■□□ 2.49
CDK11A-215ENST00000478901 MRC2Q9UBG0 1479 aa30.56■■■□□ 2.48
CDK11A-215ENST00000478901 CUX2O14529 1486 aa30.54■■■□□ 2.48
CDK11A-215ENST00000478901 WDR62O43379 1518 aa30.45■■■□□ 2.47
CDK11A-215ENST00000478901 URB2Q14146 1524 aaKnown RBP30.41■■■□□ 2.46
CDK11A-215ENST00000478901 DNAJC5Q9H3Z4 198 aa30.26■■■□□ 2.43
CDK11A-215ENST00000478901 TOPBP1Q92547 1522 aa30.25■■■□□ 2.43
CDK11A-215ENST00000478901 ABCC8Q09428 1581 aa30.22■■■□□ 2.43
CDK11A-215ENST00000478901 DNMBPQ6XZF7 1577 aa30.22■■■□□ 2.43
CDK11A-215ENST00000478901 CUX1P39880 1505 aa30.11■■■□□ 2.41
CDK11A-215ENST00000478901 POLA1P09884 1462 aaPredicted RBP30■■■□□ 2.39
CDK11A-215ENST00000478901 IFT140Q96RY7 1462 aa29.99■■■□□ 2.39
CDK11A-215ENST00000478901 WRNQ14191 1432 aaPredicted RBP eCLIP29.96■■■□□ 2.39
CDK11A-215ENST00000478901 FGD5Q6ZNL6 1462 aa29.96■■■□□ 2.39
CDK11A-215ENST00000478901 TARBP1Q13395 1621 aaKnown RBP29.91■■■□□ 2.38
CDK11A-215ENST00000478901 SYNJ1O43426 1573 aa29.9■■■□□ 2.38
CDK11A-215ENST00000478901 RAD54L2Q9Y4B4 1467 aa29.89■■■□□ 2.38
CDK11A-215ENST00000478901 SOGA1O94964 1423 aa29.88■■■□□ 2.37
CDK11A-215ENST00000478901 TOP2BQ02880 1626 aa29.88■■■□□ 2.37
CDK11A-215ENST00000478901 BIVM-ERCC5R4GMW8 1640 aa29.88■■■□□ 2.37
CDK11A-215ENST00000478901 ZNF608Q9ULD9 1512 aaPredicted RBP29.87■■■□□ 2.37
CDK11A-215ENST00000478901 EIF4G3O43432 1585 aaKnown RBP29.73■■■□□ 2.35
CDK11A-215ENST00000478901 AQRO60306 1485 aaKnown RBP eCLIP29.73■■■□□ 2.351e-6■■□□□ 14
CDK11A-215ENST00000478901 TDRD9Q8NDG6 1382 aaKnown RBP29.71■■■□□ 2.35
CDK11A-215ENST00000478901 WDR97A6NE52 1622 aa29.71■■■□□ 2.35
CDK11A-215ENST00000478901 ABCA10Q8WWZ4 1543 aa29.67■■■□□ 2.34
CDK11A-215ENST00000478901 GAPVD1Q14C86 1478 aa29.54■■■□□ 2.32
CDK11A-215ENST00000478901 ABCA5Q8WWZ7 1642 aa29.53■■■□□ 2.32
CDK11A-215ENST00000478901 GRIN2BQ13224 1484 aa29.49■■■□□ 2.31
CDK11A-215ENST00000478901 PBRM1Q86U86 1689 aa29.46■■■□□ 2.31
CDK11A-215ENST00000478901 SNAPC4Q5SXM2 1469 aa29.44■■■□□ 2.3
CDK11A-215ENST00000478901 TRIM41Q8WV44 630 aa29.4■■■□□ 2.3
CDK11A-215ENST00000478901 MAGI1Q96QZ7 1491 aaPredicted RBP29.39■■■□□ 2.3
CDK11A-215ENST00000478901 CHD1O14646 1710 aa29.34■■■□□ 2.29
CDK11A-215ENST00000478901 OSCARQ8IYS5 282 aa29.33■■■□□ 2.29
CDK11A-215ENST00000478901 ERICH3Q5RHP9 1530 aa29.31■■■□□ 2.28
CDK11A-215ENST00000478901 KIF27Q86VH2 1401 aa29.31■■■□□ 2.28
CDK11A-215ENST00000478901 FBLN2P98095 1184 aa29.31■■■□□ 2.28
CDK11A-215ENST00000478901 SYNJ2O15056 1496 aa29.29■■■□□ 2.28
CDK11A-215ENST00000478901 CHMP7Q8WUX9 453 aaPredicted RBP29.26■■■□□ 2.27
CDK11A-215ENST00000478901 ADAMTS12P58397 1594 aa29.23■■■□□ 2.27
CDK11A-215ENST00000478901 CHIC1Q5VXU3 224 aa29.21■■■□□ 2.27
CDK11A-215ENST00000478901 IGF1RP08069 1367 aa29.21■■■□□ 2.27
CDK11A-215ENST00000478901 FHAD1B1AJZ9 1412 aa29.2■■■□□ 2.26
CDK11A-215ENST00000478901 RUSC2Q8N2Y8 1516 aa29.17■■■□□ 2.26
CDK11A-215ENST00000478901 GRIN2AQ12879 1464 aa29.12■■■□□ 2.25
CDK11A-215ENST00000478901 CUL7Q14999 1698 aa29.07■■■□□ 2.24
CDK11A-215ENST00000478901 CARMIL1Q5VZK9 1371 aa29.02■■■□□ 2.24
CDK11A-215ENST00000478901 CLASP1Q7Z460 1538 aa29.02■■■□□ 2.24
CDK11A-215ENST00000478901 NUP160Q12769 1436 aa28.99■■■□□ 2.23
CDK11A-215ENST00000478901 CEP170Q5SW79 1584 aa28.99■■■□□ 2.23
CDK11A-215ENST00000478901 EEA1Q15075 1411 aa28.86■■■□□ 2.21
CDK11A-215ENST00000478901 ARHGEF11O15085 1522 aa28.86■■■□□ 2.21
CDK11A-215ENST00000478901 RAPGEF2Q9Y4G8 1499 aa28.85■■■□□ 2.21
CDK11A-215ENST00000478901 RIMBP3CA6NJZ7 1639 aa28.85■■■□□ 2.21
CDK11A-215ENST00000478901 RIMBP3BA6NNM3 1639 aa28.85■■■□□ 2.21
CDK11A-215ENST00000478901 RIMBP3Q9UFD9 1639 aa28.85■■■□□ 2.21
CDK11A-215ENST00000478901 CSRNP3Q8WYN3 585 aa28.85■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms