RNA–Protein interactions for RNA: ENST00000478677.1

AGRN-207, Transcript of agrin, humanhuman

TSL 2

Gene AGRN, Length 276 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-207ENST00000478677 NISCHQ9Y2I1 1504 aa31.59■■■□□ 2.65
AGRN-207ENST00000478677 ABCC9O60706 1549 aa28.72■■■□□ 2.19
AGRN-207ENST00000478677 CCDC180Q9P1Z9 1646 aa28.46■■■□□ 2.15
AGRN-207ENST00000478677 DNAJC5BQ9UF47 199 aa27.42■■□□□ 1.98
AGRN-207ENST00000478677 RB1CC1Q8TDY2 1594 aa27.13■■□□□ 1.93
AGRN-207ENST00000478677 NACADO15069 1562 aa26.92■■□□□ 1.9
AGRN-207ENST00000478677 UNC13AQ9UPW8 1703 aa26.76■■□□□ 1.87
AGRN-207ENST00000478677 BICRAQ9NZM4 1560 aa26.66■■□□□ 1.86
AGRN-207ENST00000478677 PABPN1Q86U42 306 aaKnown RBP eCLIP26.63■■□□□ 1.85
AGRN-207ENST00000478677 MYO15BQ96JP2 1530 aa26.54■■□□□ 1.84
AGRN-207ENST00000478677 DCAF8L2P0C7V8 631 aa26.36■■□□□ 1.81
AGRN-207ENST00000478677 ZCCHC6Q5VYS8 1495 aaKnown RBP26.17■■□□□ 1.78
AGRN-207ENST00000478677 DCAF1Q9Y4B6 1507 aa26.09■■□□□ 1.77
AGRN-207ENST00000478677 SHROOM4Q9ULL8 1493 aa26.02■■□□□ 1.76
AGRN-207ENST00000478677 CC2D2AQ9P2K1 1620 aa25.99■■□□□ 1.75
AGRN-207ENST00000478677 SCRIBQ14160 1630 aa25.88■■□□□ 1.73
AGRN-207ENST00000478677 CECR2Q9BXF3 1484 aa25.87■■□□□ 1.73
AGRN-207ENST00000478677 EIF4G1Q04637 1599 aaKnown RBP25.86■■□□□ 1.73
AGRN-207ENST00000478677 DNAJC5Q9H3Z4 198 aa25.2■■□□□ 1.62
AGRN-207ENST00000478677 NCAPD3P42695 1498 aa24.92■■□□□ 1.58
AGRN-207ENST00000478677 CUX2O14529 1486 aa24.83■■□□□ 1.57
AGRN-207ENST00000478677 ATAD2BQ9ULI0 1458 aa24.81■■□□□ 1.56
AGRN-207ENST00000478677 SMARCA4P51532 1647 aa24.72■■□□□ 1.55
AGRN-207ENST00000478677 HMGXB3Q12766 1538 aa24.71■■□□□ 1.55
AGRN-207ENST00000478677 NESP48681 1621 aa24.69■■□□□ 1.54
AGRN-207ENST00000478677 ERCC6Q03468 1493 aa24.62■■□□□ 1.53
AGRN-207ENST00000478677 SMARCA2P51531 1590 aa24.59■■□□□ 1.53
AGRN-207ENST00000478677 THOC2Q8NI27 1593 aaKnown RBP24.55■■□□□ 1.52
AGRN-207ENST00000478677 PEG3Q9GZU2 1588 aa24.55■■□□□ 1.52
AGRN-207ENST00000478677 BAZ1AQ9NRL2 1556 aaPredicted RBP24.44■■□□□ 1.5
AGRN-207ENST00000478677 BAZ1BQ9UIG0 1483 aaKnown RBP24.42■■□□□ 1.5
AGRN-207ENST00000478677 MROH2BQ7Z745 1585 aa24.39■■□□□ 1.5
AGRN-207ENST00000478677 KIF21AQ7Z4S6 1674 aa24.34■■□□□ 1.49
AGRN-207ENST00000478677 LAMC3Q9Y6N6 1575 aa24.33■■□□□ 1.49
AGRN-207ENST00000478677 WDR62O43379 1518 aa24.08■■□□□ 1.45
AGRN-207ENST00000478677 PDS5BQ9NTI5 1447 aa24.08■■□□□ 1.44
AGRN-207ENST00000478677 CADPSQ9ULU8 1353 aa24.06■■□□□ 1.44
AGRN-207ENST00000478677 WIZO95785 1651 aa24.05■■□□□ 1.44
AGRN-207ENST00000478677 MRC2Q9UBG0 1479 aa24.01■■□□□ 1.43
AGRN-207ENST00000478677 CFTRP13569 1480 aa23.81■■□□□ 1.4
AGRN-207ENST00000478677 FANCD2Q9BXW9 1451 aa23.8■■□□□ 1.4
AGRN-207ENST00000478677 CEP164Q9UPV0 1460 aa23.8■■□□□ 1.4
AGRN-207ENST00000478677 URB2Q14146 1524 aaKnown RBP23.76■■□□□ 1.39
AGRN-207ENST00000478677 TRIM41Q8WV44 630 aa23.75■■□□□ 1.39
AGRN-207ENST00000478677 RSF1Q96T23 1441 aaPredicted RBP23.73■■□□□ 1.39
AGRN-207ENST00000478677 TOP2AP11388 1531 aaKnown RBP23.68■■□□□ 1.38
AGRN-207ENST00000478677 ZNF608Q9ULD9 1512 aaPredicted RBP23.52■■□□□ 1.36
AGRN-207ENST00000478677 PRDM2Q13029 1718 aa23.51■■□□□ 1.35
AGRN-207ENST00000478677 OSCARQ8IYS5 282 aa23.48■■□□□ 1.35
AGRN-207ENST00000478677 RIMBP3CA6NJZ7 1639 aa23.47■■□□□ 1.35
AGRN-207ENST00000478677 RIMBP3BA6NNM3 1639 aa23.47■■□□□ 1.35
AGRN-207ENST00000478677 RIMBP3Q9UFD9 1639 aa23.47■■□□□ 1.35
AGRN-207ENST00000478677 CCDC88BA6NC98 1476 aa23.43■■□□□ 1.34
AGRN-207ENST00000478677 TOPBP1Q92547 1522 aa23.37■■□□□ 1.33
AGRN-207ENST00000478677 IFT140Q96RY7 1462 aa23.36■■□□□ 1.33
AGRN-207ENST00000478677 ARHGEF11O15085 1522 aa23.34■■□□□ 1.33
AGRN-207ENST00000478677 EIF4G3O43432 1585 aaKnown RBP23.32■■□□□ 1.32
AGRN-207ENST00000478677 TARBP1Q13395 1621 aaKnown RBP23.29■■□□□ 1.32
AGRN-207ENST00000478677 DNMBPQ6XZF7 1577 aa23.23■■□□□ 1.31
AGRN-207ENST00000478677 CHD1O14646 1710 aa23.19■■□□□ 1.3
AGRN-207ENST00000478677 AQRO60306 1485 aaKnown RBP eCLIP23.17■■□□□ 1.3
AGRN-207ENST00000478677 ARAP1Q96P48 1450 aa23.16■■□□□ 1.3
AGRN-207ENST00000478677 POLA1P09884 1462 aaPredicted RBP23.13■■□□□ 1.29
AGRN-207ENST00000478677 ABCC8Q09428 1581 aa23.1■■□□□ 1.29
AGRN-207ENST00000478677 RAD54L2Q9Y4B4 1467 aa23.05■■□□□ 1.28
AGRN-207ENST00000478677 CLASP1Q7Z460 1538 aa23.01■■□□□ 1.27
AGRN-207ENST00000478677 CYB5RLQ6IPT4 315 aa22.98■■□□□ 1.27
AGRN-207ENST00000478677 CUX1P39880 1505 aa22.92■■□□□ 1.26
AGRN-207ENST00000478677 TDRD9Q8NDG6 1382 aaKnown RBP22.92■■□□□ 1.26
AGRN-207ENST00000478677 SNAPC4Q5SXM2 1469 aa22.91■■□□□ 1.26
AGRN-207ENST00000478677 FGD5Q6ZNL6 1462 aa22.91■■□□□ 1.26
AGRN-207ENST00000478677 WDR97A6NE52 1622 aa22.9■■□□□ 1.26
AGRN-207ENST00000478677 SOGA1O94964 1423 aa22.88■■□□□ 1.25
AGRN-207ENST00000478677 MAGI1Q96QZ7 1491 aaPredicted RBP22.79■■□□□ 1.24
AGRN-207ENST00000478677 FBLN2P98095 1184 aa22.76■■□□□ 1.23
AGRN-207ENST00000478677 SYNJ2O15056 1496 aa22.73■■□□□ 1.23
AGRN-207ENST00000478677 GRIN2BQ13224 1484 aa22.73■■□□□ 1.23
AGRN-207ENST00000478677 SYNJ1O43426 1573 aa22.73■■□□□ 1.23
AGRN-207ENST00000478677 ABCA5Q8WWZ7 1642 aa22.72■■□□□ 1.23
AGRN-207ENST00000478677 PBRM1Q86U86 1689 aa22.71■■□□□ 1.23
AGRN-207ENST00000478677 ERCC6L2Q5T890 1561 aa22.69■■□□□ 1.22
AGRN-207ENST00000478677 TRHP20396 242 aaPredicted RBP22.66■■□□□ 1.22
AGRN-207ENST00000478677 ABCA10Q8WWZ4 1543 aa22.64■■□□□ 1.21
AGRN-207ENST00000478677 GAPVD1Q14C86 1478 aa22.62■■□□□ 1.21
AGRN-207ENST00000478677 CHMP7Q8WUX9 453 aaPredicted RBP22.58■■□□□ 1.21
AGRN-207ENST00000478677 CEP170Q5SW79 1584 aa22.55■■□□□ 1.2
AGRN-207ENST00000478677 ADAMTS12P58397 1594 aa22.53■■□□□ 1.2
AGRN-207ENST00000478677 NUP160Q12769 1436 aa22.52■■□□□ 1.2
AGRN-207ENST00000478677 SHROOM2Q13796 1616 aa22.51■■□□□ 1.19
AGRN-207ENST00000478677 GRIN2AQ12879 1464 aa22.51■■□□□ 1.19
AGRN-207ENST00000478677 BIVM-ERCC5R4GMW8 1640 aa22.45■■□□□ 1.18
AGRN-207ENST00000478677 TOP2BQ02880 1626 aa22.41■■□□□ 1.18
AGRN-207ENST00000478677 KIF13AQ9H1H9 1805 aa22.35■■□□□ 1.17
AGRN-207ENST00000478677 WRNQ14191 1432 aaPredicted RBP eCLIP22.33■■□□□ 1.17
AGRN-207ENST00000478677 FHAD1B1AJZ9 1412 aa22.31■■□□□ 1.16
AGRN-207ENST00000478677 ERICH3Q5RHP9 1530 aa22.31■■□□□ 1.16
AGRN-207ENST00000478677 RUSC2Q8N2Y8 1516 aa22.25■■□□□ 1.15
AGRN-207ENST00000478677 PRG4Q92954 1404 aaPredicted RBP22.18■■□□□ 1.14
AGRN-207ENST00000478677 ADCY10Q96PN6 1610 aa22.14■■□□□ 1.14
AGRN-207ENST00000478677 SUPT5HO00267 1087 aaKnown RBP22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms