RNA–Protein interactions for RNA: ENST00000478237.5

NECAB3-207, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 827 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-207ENST00000478237 NISCHQ9Y2I1 1504 aa55.27■■■■■ 6.44
NECAB3-207ENST00000478237 CCDC180Q9P1Z9 1646 aa49.38■■■■■ 5.5
NECAB3-207ENST00000478237 ABCC9O60706 1549 aa48.4■■■■■ 5.34
NECAB3-207ENST00000478237 RB1CC1Q8TDY2 1594 aa46.59■■■■■ 5.05
NECAB3-207ENST00000478237 NACADO15069 1562 aa46.47■■■■■ 5.03
NECAB3-207ENST00000478237 MYO15BQ96JP2 1530 aa46.17■■■■■ 4.98
NECAB3-207ENST00000478237 DCAF8L2P0C7V8 631 aa46.13■■■■■ 4.98
NECAB3-207ENST00000478237 ZCCHC6Q5VYS8 1495 aaKnown RBP46■■■■■ 4.95
NECAB3-207ENST00000478237 DCAF1Q9Y4B6 1507 aa45.83■■■■■ 4.93
NECAB3-207ENST00000478237 UNC13AQ9UPW8 1703 aa45.48■■■■■ 4.87
NECAB3-207ENST00000478237 PABPN1Q86U42 306 aaKnown RBP eCLIP45.11■■■■■ 4.818e-8■■□□□ 11.7
NECAB3-207ENST00000478237 BICRAQ9NZM4 1560 aa45.1■■■■■ 4.81
NECAB3-207ENST00000478237 SCRIBQ14160 1630 aa44.87■■■■■ 4.77
NECAB3-207ENST00000478237 SHROOM4Q9ULL8 1493 aa44.81■■■■■ 4.76
NECAB3-207ENST00000478237 DNAJC5BQ9UF47 199 aa44.6■■■■■ 4.73
NECAB3-207ENST00000478237 EIF4G1Q04637 1599 aaKnown RBP43.97■■■■■ 4.63
NECAB3-207ENST00000478237 CC2D2AQ9P2K1 1620 aa43.84■■■■■ 4.61
NECAB3-207ENST00000478237 CECR2Q9BXF3 1484 aa43.58■■■■■ 4.57
NECAB3-207ENST00000478237 SMARCA4P51532 1647 aa42.96■■■■■ 4.47
NECAB3-207ENST00000478237 BAZ1AQ9NRL2 1556 aaPredicted RBP42.91■■■■■ 4.46
NECAB3-207ENST00000478237 NCAPD3P42695 1498 aa42.85■■■■■ 4.45
NECAB3-207ENST00000478237 SMARCA2P51531 1590 aa42.8■■■■■ 4.44
NECAB3-207ENST00000478237 ATAD2BQ9ULI0 1458 aa42.78■■■■■ 4.44
NECAB3-207ENST00000478237 HMGXB3Q12766 1538 aa42.66■■■■■ 4.42
NECAB3-207ENST00000478237 PEG3Q9GZU2 1588 aa42.61■■■■■ 4.41
NECAB3-207ENST00000478237 MROH2BQ7Z745 1585 aa42.52■■■■■ 4.4
NECAB3-207ENST00000478237 BAZ1BQ9UIG0 1483 aaKnown RBP42.43■■■■■ 4.38
NECAB3-207ENST00000478237 WIZO95785 1651 aa42.06■■■■■ 4.32
NECAB3-207ENST00000478237 RSF1Q96T23 1441 aaPredicted RBP41.95■■■■■ 4.31
NECAB3-207ENST00000478237 ERCC6Q03468 1493 aa41.82■■■■■ 4.29
NECAB3-207ENST00000478237 LAMC3Q9Y6N6 1575 aa41.8■■■■■ 4.28
NECAB3-207ENST00000478237 NESP48681 1621 aa41.78■■■■■ 4.28
NECAB3-207ENST00000478237 TOP2AP11388 1531 aaKnown RBP41.67■■■■■ 4.26
NECAB3-207ENST00000478237 CUX2O14529 1486 aa41.57■■■■■ 4.25
NECAB3-207ENST00000478237 CADPSQ9ULU8 1353 aa41.56■■■■■ 4.24
NECAB3-207ENST00000478237 PDS5BQ9NTI5 1447 aa41.52■■■■■ 4.24
NECAB3-207ENST00000478237 KIF21AQ7Z4S6 1674 aa41.36■■■■■ 4.21
NECAB3-207ENST00000478237 THOC2Q8NI27 1593 aaKnown RBP41.32■■■■■ 4.2
NECAB3-207ENST00000478237 CFTRP13569 1480 aa41.27■■■■■ 4.2
NECAB3-207ENST00000478237 CCDC88BA6NC98 1476 aa41.11■■■■■ 4.17
NECAB3-207ENST00000478237 FANCD2Q9BXW9 1451 aa41.07■■■■■ 4.16
NECAB3-207ENST00000478237 MRC2Q9UBG0 1479 aa41.07■■■■■ 4.16
NECAB3-207ENST00000478237 CEP164Q9UPV0 1460 aa41.07■■■■■ 4.16
NECAB3-207ENST00000478237 PRDM2Q13029 1718 aa41.02■■■■■ 4.16
NECAB3-207ENST00000478237 WDR62O43379 1518 aa40.96■■■■■ 4.15
NECAB3-207ENST00000478237 URB2Q14146 1524 aaKnown RBP40.64■■■■■ 4.1
NECAB3-207ENST00000478237 SUPT5HO00267 1087 aaKnown RBP40.55■■■■■ 4.08
NECAB3-207ENST00000478237 DNAJC5Q9H3Z4 198 aa40.54■■■■■ 4.08
NECAB3-207ENST00000478237 ABCC8Q09428 1581 aa40.47■■■■■ 4.07
NECAB3-207ENST00000478237 TOPBP1Q92547 1522 aa40.37■■■■■ 4.05
NECAB3-207ENST00000478237 DNMBPQ6XZF7 1577 aa40.35■■■■■ 4.05
NECAB3-207ENST00000478237 IFT140Q96RY7 1462 aa40.24■■■■■ 4.03
NECAB3-207ENST00000478237 POLA1P09884 1462 aaPredicted RBP40■■■■□ 3.99
NECAB3-207ENST00000478237 TARBP1Q13395 1621 aaKnown RBP39.98■■■■□ 3.99
NECAB3-207ENST00000478237 ZNF608Q9ULD9 1512 aaPredicted RBP39.97■■■■□ 3.99
NECAB3-207ENST00000478237 CUX1P39880 1505 aa39.93■■■■□ 3.98
NECAB3-207ENST00000478237 EIF4G3O43432 1585 aaKnown RBP39.89■■■■□ 3.98
NECAB3-207ENST00000478237 FGD5Q6ZNL6 1462 aa39.85■■■■□ 3.97
NECAB3-207ENST00000478237 SOGA1O94964 1423 aa39.82■■■■□ 3.97
NECAB3-207ENST00000478237 WDR97A6NE52 1622 aa39.79■■■■□ 3.96
NECAB3-207ENST00000478237 RAD54L2Q9Y4B4 1467 aa39.76■■■■□ 3.96
NECAB3-207ENST00000478237 OSCARQ8IYS5 282 aa39.72■■■■□ 3.95
NECAB3-207ENST00000478237 AQRO60306 1485 aaKnown RBP eCLIP39.7■■■■□ 3.954e-8■■■■■ 28.5
NECAB3-207ENST00000478237 WRNQ14191 1432 aaPredicted RBP eCLIP39.6■■■■□ 3.93
NECAB3-207ENST00000478237 TDRD9Q8NDG6 1382 aaKnown RBP39.59■■■■□ 3.93
NECAB3-207ENST00000478237 TOP2BQ02880 1626 aa39.58■■■■□ 3.93
NECAB3-207ENST00000478237 BIVM-ERCC5R4GMW8 1640 aa39.58■■■■□ 3.93
NECAB3-207ENST00000478237 ABCA10Q8WWZ4 1543 aa39.51■■■■□ 3.92
NECAB3-207ENST00000478237 SYNJ1O43426 1573 aa39.47■■■■□ 3.91
NECAB3-207ENST00000478237 GRIN2BQ13224 1484 aa39.45■■■■□ 3.91
NECAB3-207ENST00000478237 CHD1O14646 1710 aa39.43■■■■□ 3.9
NECAB3-207ENST00000478237 MAGI1Q96QZ7 1491 aaPredicted RBP39.41■■■■□ 3.9
NECAB3-207ENST00000478237 GAPVD1Q14C86 1478 aa39.39■■■■□ 3.9
NECAB3-207ENST00000478237 SNAPC4Q5SXM2 1469 aa39.38■■■■□ 3.9
NECAB3-207ENST00000478237 ABCA5Q8WWZ7 1642 aa39.37■■■■□ 3.89
NECAB3-207ENST00000478237 PBRM1Q86U86 1689 aa39.35■■■■□ 3.89
NECAB3-207ENST00000478237 FBLN2P98095 1184 aa39.27■■■■□ 3.88
NECAB3-207ENST00000478237 SYNJ2O15056 1496 aa39.24■■■■□ 3.87
NECAB3-207ENST00000478237 CHMP7Q8WUX9 453 aaPredicted RBP39.19■■■■□ 3.86
NECAB3-207ENST00000478237 RIMBP3CA6NJZ7 1639 aa39.11■■■■□ 3.85
NECAB3-207ENST00000478237 RIMBP3BA6NNM3 1639 aa39.11■■■■□ 3.85
NECAB3-207ENST00000478237 RIMBP3Q9UFD9 1639 aa39.11■■■■□ 3.85
NECAB3-207ENST00000478237 ARHGEF11O15085 1522 aa39.07■■■■□ 3.84
NECAB3-207ENST00000478237 ERICH3Q5RHP9 1530 aa39.07■■■■□ 3.84
NECAB3-207ENST00000478237 CLASP1Q7Z460 1538 aa39.02■■■■□ 3.84
NECAB3-207ENST00000478237 ADAMTS12P58397 1594 aa39.01■■■■□ 3.84
NECAB3-207ENST00000478237 TRIM41Q8WV44 630 aa38.97■■■■□ 3.83
NECAB3-207ENST00000478237 FHAD1B1AJZ9 1412 aa38.95■■■■□ 3.83
NECAB3-207ENST00000478237 GRIN2AQ12879 1464 aa38.92■■■■□ 3.82
NECAB3-207ENST00000478237 KIF27Q86VH2 1401 aa38.82■■■■□ 3.81
NECAB3-207ENST00000478237 NUP160Q12769 1436 aa38.78■■■■□ 3.8
NECAB3-207ENST00000478237 ARAP1Q96P48 1450 aa38.72■■■■□ 3.79
NECAB3-207ENST00000478237 CEP170Q5SW79 1584 aa38.71■■■■□ 3.79
NECAB3-207ENST00000478237 CUL7Q14999 1698 aa38.68■■■■□ 3.78
NECAB3-207ENST00000478237 CYB5RLQ6IPT4 315 aa38.64■■■■□ 3.78
NECAB3-207ENST00000478237 IGF1RP08069 1367 aa38.64■■■■□ 3.78
NECAB3-207ENST00000478237 SHROOM2Q13796 1616 aa38.54■■■■□ 3.76
NECAB3-207ENST00000478237 RUSC2Q8N2Y8 1516 aa38.44■■■■□ 3.74
NECAB3-207ENST00000478237 CARMIL1Q5VZK9 1371 aa38.43■■■■□ 3.74
NECAB3-207ENST00000478237 KIAA0586Q9BVV6 1533 aa38.34■■■■□ 3.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms