RNA–Protein interactions for RNA: ENST00000478185.1

PSMD6-207, Transcript of proteasome 26S subunit, non-ATPase 6, humanhuman

TSL 5

Gene PSMD6, Length 469 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD6-207ENST00000478185 NISCHQ9Y2I1 1504 aa26.83■■□□□ 1.89
PSMD6-207ENST00000478185 ABCC9O60706 1549 aa24.32■■□□□ 1.48
PSMD6-207ENST00000478185 CCDC180Q9P1Z9 1646 aa24.14■■□□□ 1.46
PSMD6-207ENST00000478185 RB1CC1Q8TDY2 1594 aa23.05■■□□□ 1.28
PSMD6-207ENST00000478185 DNAJC5BQ9UF47 199 aa22.91■■□□□ 1.26
PSMD6-207ENST00000478185 NACADO15069 1562 aa22.84■■□□□ 1.25
PSMD6-207ENST00000478185 DCAF8L2P0C7V8 631 aa22.75■■□□□ 1.23
PSMD6-207ENST00000478185 PABPN1Q86U42 306 aaKnown RBP eCLIP22.61■■□□□ 1.21
PSMD6-207ENST00000478185 UNC13AQ9UPW8 1703 aa22.6■■□□□ 1.21
PSMD6-207ENST00000478185 MYO15BQ96JP2 1530 aa22.43■■□□□ 1.18
PSMD6-207ENST00000478185 BICRAQ9NZM4 1560 aa22.4■■□□□ 1.18
PSMD6-207ENST00000478185 ZCCHC6Q5VYS8 1495 aaKnown RBP22.22■■□□□ 1.15
PSMD6-207ENST00000478185 DCAF1Q9Y4B6 1507 aa22.11■■□□□ 1.13
PSMD6-207ENST00000478185 SCRIBQ14160 1630 aa22.06■■□□□ 1.12
PSMD6-207ENST00000478185 SHROOM4Q9ULL8 1493 aa22.02■■□□□ 1.12
PSMD6-207ENST00000478185 CC2D2AQ9P2K1 1620 aa21.95■■□□□ 1.1
PSMD6-207ENST00000478185 CECR2Q9BXF3 1484 aa21.9■■□□□ 1.1
PSMD6-207ENST00000478185 EIF4G1Q04637 1599 aaKnown RBP21.87■■□□□ 1.09
PSMD6-207ENST00000478185 DNAJC5Q9H3Z4 198 aa21.1■□□□□ 0.97
PSMD6-207ENST00000478185 NCAPD3P42695 1498 aa21.07■□□□□ 0.96
PSMD6-207ENST00000478185 ATAD2BQ9ULI0 1458 aa21.02■□□□□ 0.96
PSMD6-207ENST00000478185 ERCC6Q03468 1493 aa21.01■□□□□ 0.95
PSMD6-207ENST00000478185 SMARCA4P51532 1647 aa20.99■□□□□ 0.95
PSMD6-207ENST00000478185 CUX2O14529 1486 aa20.97■□□□□ 0.95
PSMD6-207ENST00000478185 SMARCA2P51531 1590 aa20.95■□□□□ 0.94
PSMD6-207ENST00000478185 HMGXB3Q12766 1538 aa20.93■□□□□ 0.94
PSMD6-207ENST00000478185 NESP48681 1621 aa20.86■□□□□ 0.93
PSMD6-207ENST00000478185 BAZ1AQ9NRL2 1556 aaPredicted RBP20.84■□□□□ 0.93
PSMD6-207ENST00000478185 BAZ1BQ9UIG0 1483 aaKnown RBP20.82■□□□□ 0.92
PSMD6-207ENST00000478185 PEG3Q9GZU2 1588 aa20.74■□□□□ 0.91
PSMD6-207ENST00000478185 MROH2BQ7Z745 1585 aa20.7■□□□□ 0.9
PSMD6-207ENST00000478185 THOC2Q8NI27 1593 aaKnown RBP20.67■□□□□ 0.9
PSMD6-207ENST00000478185 LAMC3Q9Y6N6 1575 aa20.64■□□□□ 0.9
PSMD6-207ENST00000478185 KIF21AQ7Z4S6 1674 aa20.61■□□□□ 0.89
PSMD6-207ENST00000478185 PDS5BQ9NTI5 1447 aa20.52■□□□□ 0.87
PSMD6-207ENST00000478185 WIZO95785 1651 aa20.47■□□□□ 0.87
PSMD6-207ENST00000478185 CADPSQ9ULU8 1353 aa20.44■□□□□ 0.86
PSMD6-207ENST00000478185 MRC2Q9UBG0 1479 aa20.37■□□□□ 0.85
PSMD6-207ENST00000478185 WDR62O43379 1518 aa20.33■□□□□ 0.85
PSMD6-207ENST00000478185 CEP164Q9UPV0 1460 aa20.27■□□□□ 0.84
PSMD6-207ENST00000478185 FANCD2Q9BXW9 1451 aa20.24■□□□□ 0.83
PSMD6-207ENST00000478185 TRIM41Q8WV44 630 aa20.2■□□□□ 0.82
PSMD6-207ENST00000478185 RSF1Q96T23 1441 aaPredicted RBP20.19■□□□□ 0.82
PSMD6-207ENST00000478185 CFTRP13569 1480 aa20.18■□□□□ 0.82
PSMD6-207ENST00000478185 TOP2AP11388 1531 aaKnown RBP20.17■□□□□ 0.82
PSMD6-207ENST00000478185 URB2Q14146 1524 aaKnown RBP20.09■□□□□ 0.81
PSMD6-207ENST00000478185 PRDM2Q13029 1718 aa20.02■□□□□ 0.8
PSMD6-207ENST00000478185 OSCARQ8IYS5 282 aa19.97■□□□□ 0.79
PSMD6-207ENST00000478185 CCDC88BA6NC98 1476 aa19.93■□□□□ 0.78
PSMD6-207ENST00000478185 ZNF608Q9ULD9 1512 aaPredicted RBP19.87■□□□□ 0.77
PSMD6-207ENST00000478185 IFT140Q96RY7 1462 aa19.85■□□□□ 0.77
PSMD6-207ENST00000478185 TOPBP1Q92547 1522 aa19.84■□□□□ 0.77
PSMD6-207ENST00000478185 RIMBP3CA6NJZ7 1639 aa19.8■□□□□ 0.76
PSMD6-207ENST00000478185 RIMBP3BA6NNM3 1639 aa19.8■□□□□ 0.76
PSMD6-207ENST00000478185 RIMBP3Q9UFD9 1639 aa19.8■□□□□ 0.76
PSMD6-207ENST00000478185 EIF4G3O43432 1585 aaKnown RBP19.77■□□□□ 0.76
PSMD6-207ENST00000478185 DNMBPQ6XZF7 1577 aa19.75■□□□□ 0.75
PSMD6-207ENST00000478185 ABCC8Q09428 1581 aa19.74■□□□□ 0.75
PSMD6-207ENST00000478185 ARHGEF11O15085 1522 aa19.71■□□□□ 0.75
PSMD6-207ENST00000478185 TARBP1Q13395 1621 aaKnown RBP19.67■□□□□ 0.74
PSMD6-207ENST00000478185 CHD1O14646 1710 aa19.67■□□□□ 0.74
PSMD6-207ENST00000478185 AQRO60306 1485 aaKnown RBP eCLIP19.67■□□□□ 0.746e-6■■■■□ 23.2
PSMD6-207ENST00000478185 POLA1P09884 1462 aaPredicted RBP19.62■□□□□ 0.73
PSMD6-207ENST00000478185 RAD54L2Q9Y4B4 1467 aa19.58■□□□□ 0.72
PSMD6-207ENST00000478185 FBLN2P98095 1184 aa19.57■□□□□ 0.72
PSMD6-207ENST00000478185 CYB5RLQ6IPT4 315 aa19.56■□□□□ 0.72
PSMD6-207ENST00000478185 TDRD9Q8NDG6 1382 aaKnown RBP19.52■□□□□ 0.72
PSMD6-207ENST00000478185 SOGA1O94964 1423 aa19.51■□□□□ 0.71
PSMD6-207ENST00000478185 ARAP1Q96P48 1450 aa19.51■□□□□ 0.71
PSMD6-207ENST00000478185 FGD5Q6ZNL6 1462 aa19.49■□□□□ 0.71
PSMD6-207ENST00000478185 SNAPC4Q5SXM2 1469 aa19.48■□□□□ 0.71
PSMD6-207ENST00000478185 CUX1P39880 1505 aa19.46■□□□□ 0.71
PSMD6-207ENST00000478185 WDR97A6NE52 1622 aa19.43■□□□□ 0.7
PSMD6-207ENST00000478185 TRHP20396 242 aaPredicted RBP19.4■□□□□ 0.7
PSMD6-207ENST00000478185 CLASP1Q7Z460 1538 aa19.4■□□□□ 0.7
PSMD6-207ENST00000478185 MAGI1Q96QZ7 1491 aaPredicted RBP19.38■□□□□ 0.69
PSMD6-207ENST00000478185 SYNJ1O43426 1573 aa19.37■□□□□ 0.69
PSMD6-207ENST00000478185 CHMP7Q8WUX9 453 aaPredicted RBP19.37■□□□□ 0.69
PSMD6-207ENST00000478185 GRIN2BQ13224 1484 aa19.36■□□□□ 0.69
PSMD6-207ENST00000478185 PBRM1Q86U86 1689 aa19.34■□□□□ 0.69
PSMD6-207ENST00000478185 SYNJ2O15056 1496 aa19.32■□□□□ 0.68
PSMD6-207ENST00000478185 GAPVD1Q14C86 1478 aa19.28■□□□□ 0.68
PSMD6-207ENST00000478185 ABCA5Q8WWZ7 1642 aa19.25■□□□□ 0.67
PSMD6-207ENST00000478185 ABCA10Q8WWZ4 1543 aa19.24■□□□□ 0.67
PSMD6-207ENST00000478185 SUPT5HO00267 1087 aaKnown RBP19.23■□□□□ 0.67
PSMD6-207ENST00000478185 GRIN2AQ12879 1464 aa19.14■□□□□ 0.65
PSMD6-207ENST00000478185 ADAMTS12P58397 1594 aa19.13■□□□□ 0.65
PSMD6-207ENST00000478185 ERCC6L2Q5T890 1561 aa19.12■□□□□ 0.65
PSMD6-207ENST00000478185 WRNQ14191 1432 aaPredicted RBP eCLIP19.12■□□□□ 0.65
PSMD6-207ENST00000478185 BIVM-ERCC5R4GMW8 1640 aa19.11■□□□□ 0.65
PSMD6-207ENST00000478185 TOP2BQ02880 1626 aa19.09■□□□□ 0.65
PSMD6-207ENST00000478185 CEP170Q5SW79 1584 aa19.09■□□□□ 0.65
PSMD6-207ENST00000478185 NUP160Q12769 1436 aa19.06■□□□□ 0.64
PSMD6-207ENST00000478185 FHAD1B1AJZ9 1412 aa19.02■□□□□ 0.64
PSMD6-207ENST00000478185 SHROOM2Q13796 1616 aa19■□□□□ 0.63
PSMD6-207ENST00000478185 ERICH3Q5RHP9 1530 aa18.99■□□□□ 0.63
PSMD6-207ENST00000478185 AEBP2Q6ZN18 517 aaPredicted RBP18.93■□□□□ 0.62
PSMD6-207ENST00000478185 PRG4Q92954 1404 aaPredicted RBP18.9■□□□□ 0.62
PSMD6-207ENST00000478185 KIF13AQ9H1H9 1805 aa18.86■□□□□ 0.61
PSMD6-207ENST00000478185 RUSC2Q8N2Y8 1516 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms