RNA–Protein interactions for RNA: ENST00000477960.1

GLDC-204, Transcript of glycine decarboxylase, humanhuman

TSL 3

Gene GLDC, Length 762 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GLDC-204ENST00000477960 NISCHQ9Y2I1 1504 aa23.84■■□□□ 1.41
GLDC-204ENST00000477960 ABCC9O60706 1549 aa21.61■■□□□ 1.05
GLDC-204ENST00000477960 CCDC180Q9P1Z9 1646 aa21.58■■□□□ 1.05
GLDC-204ENST00000477960 RB1CC1Q8TDY2 1594 aa20.59■□□□□ 0.89
GLDC-204ENST00000477960 DNAJC5BQ9UF47 199 aa20.41■□□□□ 0.86
GLDC-204ENST00000477960 NACADO15069 1562 aa20.39■□□□□ 0.85
GLDC-204ENST00000477960 UNC13AQ9UPW8 1703 aa20.23■□□□□ 0.83
GLDC-204ENST00000477960 DCAF8L2P0C7V8 631 aa20.12■□□□□ 0.81
GLDC-204ENST00000477960 MYO15BQ96JP2 1530 aa20.06■□□□□ 0.8
GLDC-204ENST00000477960 PABPN1Q86U42 306 aaKnown RBP eCLIP20.04■□□□□ 0.8
GLDC-204ENST00000477960 BICRAQ9NZM4 1560 aa19.97■□□□□ 0.79
GLDC-204ENST00000477960 DCAF1Q9Y4B6 1507 aa19.72■□□□□ 0.75
GLDC-204ENST00000477960 ZCCHC6Q5VYS8 1495 aaKnown RBP19.7■□□□□ 0.74
GLDC-204ENST00000477960 SHROOM4Q9ULL8 1493 aa19.7■□□□□ 0.74
GLDC-204ENST00000477960 CC2D2AQ9P2K1 1620 aa19.59■□□□□ 0.73
GLDC-204ENST00000477960 SCRIBQ14160 1630 aa19.54■□□□□ 0.72
GLDC-204ENST00000477960 CECR2Q9BXF3 1484 aa19.5■□□□□ 0.71
GLDC-204ENST00000477960 EIF4G1Q04637 1599 aaKnown RBP19.49■□□□□ 0.71
GLDC-204ENST00000477960 DNAJC5Q9H3Z4 198 aa18.93■□□□□ 0.62
GLDC-204ENST00000477960 NCAPD3P42695 1498 aa18.78■□□□□ 0.6
GLDC-204ENST00000477960 CUX2O14529 1486 aa18.76■□□□□ 0.59
GLDC-204ENST00000477960 ERCC6Q03468 1493 aa18.69■□□□□ 0.58
GLDC-204ENST00000477960 ATAD2BQ9ULI0 1458 aa18.68■□□□□ 0.58
GLDC-204ENST00000477960 SMARCA2P51531 1590 aa18.67■□□□□ 0.58
GLDC-204ENST00000477960 SMARCA4P51532 1647 aa18.67■□□□□ 0.58
GLDC-204ENST00000477960 HMGXB3Q12766 1538 aa18.65■□□□□ 0.58
GLDC-204ENST00000477960 BAZ1AQ9NRL2 1556 aaPredicted RBP18.54■□□□□ 0.56
GLDC-204ENST00000477960 NESP48681 1621 aa18.52■□□□□ 0.55
GLDC-204ENST00000477960 PEG3Q9GZU2 1588 aa18.51■□□□□ 0.55
GLDC-204ENST00000477960 BAZ1BQ9UIG0 1483 aaKnown RBP18.5■□□□□ 0.55
GLDC-204ENST00000477960 LAMC3Q9Y6N6 1575 aa18.45■□□□□ 0.54
GLDC-204ENST00000477960 THOC2Q8NI27 1593 aaKnown RBP18.43■□□□□ 0.54
GLDC-204ENST00000477960 KIF21AQ7Z4S6 1674 aa18.38■□□□□ 0.53
GLDC-204ENST00000477960 MROH2BQ7Z745 1585 aa18.34■□□□□ 0.53
GLDC-204ENST00000477960 PDS5BQ9NTI5 1447 aa18.29■□□□□ 0.52
GLDC-204ENST00000477960 CADPSQ9ULU8 1353 aa18.18■□□□□ 0.5
GLDC-204ENST00000477960 WIZO95785 1651 aa18.17■□□□□ 0.5
GLDC-204ENST00000477960 MRC2Q9UBG0 1479 aa18.14■□□□□ 0.49
GLDC-204ENST00000477960 WDR62O43379 1518 aa18.13■□□□□ 0.49
GLDC-204ENST00000477960 CEP164Q9UPV0 1460 aa18.03■□□□□ 0.48
GLDC-204ENST00000477960 FANCD2Q9BXW9 1451 aa17.98■□□□□ 0.47
GLDC-204ENST00000477960 TRIM41Q8WV44 630 aa17.97■□□□□ 0.47
GLDC-204ENST00000477960 CFTRP13569 1480 aa17.95■□□□□ 0.46
GLDC-204ENST00000477960 PRDM2Q13029 1718 aa17.95■□□□□ 0.46
GLDC-204ENST00000477960 TOP2AP11388 1531 aaKnown RBP17.9■□□□□ 0.46
GLDC-204ENST00000477960 RSF1Q96T23 1441 aaPredicted RBP17.88■□□□□ 0.45
GLDC-204ENST00000477960 URB2Q14146 1524 aaKnown RBP17.84■□□□□ 0.45
GLDC-204ENST00000477960 OSCARQ8IYS5 282 aa17.84■□□□□ 0.45
GLDC-204ENST00000477960 RIMBP3CA6NJZ7 1639 aa17.69■□□□□ 0.42
GLDC-204ENST00000477960 RIMBP3BA6NNM3 1639 aa17.69■□□□□ 0.42
GLDC-204ENST00000477960 RIMBP3Q9UFD9 1639 aa17.69■□□□□ 0.42
GLDC-204ENST00000477960 CCDC88BA6NC98 1476 aa17.67■□□□□ 0.42
GLDC-204ENST00000477960 IFT140Q96RY7 1462 aa17.67■□□□□ 0.42
GLDC-204ENST00000477960 ABCC8Q09428 1581 aa17.64■□□□□ 0.41
GLDC-204ENST00000477960 TOPBP1Q92547 1522 aa17.63■□□□□ 0.41
GLDC-204ENST00000477960 ZNF608Q9ULD9 1512 aaPredicted RBP17.63■□□□□ 0.41
GLDC-204ENST00000477960 EIF4G3O43432 1585 aaKnown RBP17.59■□□□□ 0.41
GLDC-204ENST00000477960 DNMBPQ6XZF7 1577 aa17.57■□□□□ 0.4
GLDC-204ENST00000477960 CHD1O14646 1710 aa17.57■□□□□ 0.4
GLDC-204ENST00000477960 ARHGEF11O15085 1522 aa17.57■□□□□ 0.4
GLDC-204ENST00000477960 TARBP1Q13395 1621 aaKnown RBP17.54■□□□□ 0.4
GLDC-204ENST00000477960 AQRO60306 1485 aaKnown RBP eCLIP17.44■□□□□ 0.38
GLDC-204ENST00000477960 POLA1P09884 1462 aaPredicted RBP17.43■□□□□ 0.38
GLDC-204ENST00000477960 CYB5RLQ6IPT4 315 aa17.41■□□□□ 0.38
GLDC-204ENST00000477960 WDR97A6NE52 1622 aa17.39■□□□□ 0.37
GLDC-204ENST00000477960 ARAP1Q96P48 1450 aa17.36■□□□□ 0.37
GLDC-204ENST00000477960 FBLN2P98095 1184 aa17.35■□□□□ 0.37
GLDC-204ENST00000477960 SOGA1O94964 1423 aa17.34■□□□□ 0.37
GLDC-204ENST00000477960 RAD54L2Q9Y4B4 1467 aa17.34■□□□□ 0.37
GLDC-204ENST00000477960 TDRD9Q8NDG6 1382 aaKnown RBP17.29■□□□□ 0.36
GLDC-204ENST00000477960 FGD5Q6ZNL6 1462 aa17.29■□□□□ 0.36
GLDC-204ENST00000477960 CLASP1Q7Z460 1538 aa17.28■□□□□ 0.36
GLDC-204ENST00000477960 TRHP20396 242 aaPredicted RBP17.28■□□□□ 0.36
GLDC-204ENST00000477960 SNAPC4Q5SXM2 1469 aa17.28■□□□□ 0.36
GLDC-204ENST00000477960 SYNJ1O43426 1573 aa17.28■□□□□ 0.36
GLDC-204ENST00000477960 MAGI1Q96QZ7 1491 aaPredicted RBP17.26■□□□□ 0.35
GLDC-204ENST00000477960 PBRM1Q86U86 1689 aa17.25■□□□□ 0.35
GLDC-204ENST00000477960 CUX1P39880 1505 aa17.25■□□□□ 0.35
GLDC-204ENST00000477960 GRIN2BQ13224 1484 aa17.23■□□□□ 0.35
GLDC-204ENST00000477960 CHMP7Q8WUX9 453 aaPredicted RBP17.22■□□□□ 0.35
GLDC-204ENST00000477960 AEBP2Q6ZN18 517 aaPredicted RBP17.21■□□□□ 0.35
GLDC-204ENST00000477960 SYNJ2O15056 1496 aa17.19■□□□□ 0.34
GLDC-204ENST00000477960 GAPVD1Q14C86 1478 aa17.14■□□□□ 0.33
GLDC-204ENST00000477960 ABCA5Q8WWZ7 1642 aa17.14■□□□□ 0.33
GLDC-204ENST00000477960 ABCA10Q8WWZ4 1543 aa17.1■□□□□ 0.33
GLDC-204ENST00000477960 GRIN2AQ12879 1464 aa17■□□□□ 0.31
GLDC-204ENST00000477960 BIVM-ERCC5R4GMW8 1640 aa17■□□□□ 0.31
GLDC-204ENST00000477960 ADAMTS12P58397 1594 aa16.99■□□□□ 0.31
GLDC-204ENST00000477960 WRNQ14191 1432 aaPredicted RBP eCLIP16.97■□□□□ 0.31
GLDC-204ENST00000477960 TOP2BQ02880 1626 aa16.97■□□□□ 0.31
GLDC-204ENST00000477960 SHROOM2Q13796 1616 aa16.97■□□□□ 0.31
GLDC-204ENST00000477960 CEP170Q5SW79 1584 aa16.97■□□□□ 0.31
GLDC-204ENST00000477960 ERCC6L2Q5T890 1561 aa16.97■□□□□ 0.31
GLDC-204ENST00000477960 NUP160Q12769 1436 aa16.95■□□□□ 0.3
GLDC-204ENST00000477960 ERICH3Q5RHP9 1530 aa16.91■□□□□ 0.3
GLDC-204ENST00000477960 FHAD1B1AJZ9 1412 aa16.91■□□□□ 0.3
GLDC-204ENST00000477960 KIF13AQ9H1H9 1805 aa16.91■□□□□ 0.3
GLDC-204ENST00000477960 SUPT5HO00267 1087 aaKnown RBP16.89■□□□□ 0.29
GLDC-204ENST00000477960 CHIC1Q5VXU3 224 aa16.81■□□□□ 0.28
GLDC-204ENST00000477960 PRG4Q92954 1404 aaPredicted RBP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms