RNA–Protein interactions for RNA: ENST00000477736.5

MRPL38-209, Transcript of mitochondrial ribosomal protein L38, humanhuman

TSL 2

Gene MRPL38, Length 843 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL38-209ENST00000477736 NISCHQ9Y2I1 1504 aa43.02■■■■■ 4.48
MRPL38-209ENST00000477736 CCDC180Q9P1Z9 1646 aa38.84■■■■□ 3.81
MRPL38-209ENST00000477736 ABCC9O60706 1549 aa38.63■■■■□ 3.77
MRPL38-209ENST00000477736 RB1CC1Q8TDY2 1594 aa36.87■■■■□ 3.49
MRPL38-209ENST00000477736 NACADO15069 1562 aa36.58■■■■□ 3.45
MRPL38-209ENST00000477736 UNC13AQ9UPW8 1703 aa36.21■■■■□ 3.39
MRPL38-209ENST00000477736 DCAF8L2P0C7V8 631 aa36.07■■■■□ 3.36
MRPL38-209ENST00000477736 DNAJC5BQ9UF47 199 aa36.06■■■■□ 3.36
MRPL38-209ENST00000477736 MYO15BQ96JP2 1530 aa36.05■■■■□ 3.36
MRPL38-209ENST00000477736 PABPN1Q86U42 306 aaKnown RBP eCLIP35.8■■■■□ 3.32
MRPL38-209ENST00000477736 BICRAQ9NZM4 1560 aa35.77■■■■□ 3.32
MRPL38-209ENST00000477736 ZCCHC6Q5VYS8 1495 aaKnown RBP35.71■■■■□ 3.31
MRPL38-209ENST00000477736 DCAF1Q9Y4B6 1507 aa35.58■■■■□ 3.29
MRPL38-209ENST00000477736 SHROOM4Q9ULL8 1493 aa35.35■■■■□ 3.25
MRPL38-209ENST00000477736 SCRIBQ14160 1630 aa35.29■■■■□ 3.24
MRPL38-209ENST00000477736 CC2D2AQ9P2K1 1620 aa34.99■■■■□ 3.19
MRPL38-209ENST00000477736 EIF4G1Q04637 1599 aaKnown RBP34.91■■■■□ 3.18
MRPL38-209ENST00000477736 CECR2Q9BXF3 1484 aa34.8■■■■□ 3.16
MRPL38-209ENST00000477736 SMARCA4P51532 1647 aa33.67■■■□□ 2.98
MRPL38-209ENST00000477736 NCAPD3P42695 1498 aa33.66■■■□□ 2.98
MRPL38-209ENST00000477736 SMARCA2P51531 1590 aa33.58■■■□□ 2.97
MRPL38-209ENST00000477736 ATAD2BQ9ULI0 1458 aa33.57■■■□□ 2.97
MRPL38-209ENST00000477736 HMGXB3Q12766 1538 aa33.56■■■□□ 2.96
MRPL38-209ENST00000477736 BAZ1AQ9NRL2 1556 aaPredicted RBP33.46■■■□□ 2.95
MRPL38-209ENST00000477736 ERCC6Q03468 1493 aa33.38■■■□□ 2.93
MRPL38-209ENST00000477736 CUX2O14529 1486 aa33.37■■■□□ 2.93
MRPL38-209ENST00000477736 PEG3Q9GZU2 1588 aa33.33■■■□□ 2.93
MRPL38-209ENST00000477736 BAZ1BQ9UIG0 1483 aaKnown RBP33.31■■■□□ 2.92
MRPL38-209ENST00000477736 NESP48681 1621 aa33.17■■■□□ 2.9
MRPL38-209ENST00000477736 DNAJC5Q9H3Z4 198 aa33.17■■■□□ 2.9
MRPL38-209ENST00000477736 MROH2BQ7Z745 1585 aa33.14■■■□□ 2.9
MRPL38-209ENST00000477736 LAMC3Q9Y6N6 1575 aa33.04■■■□□ 2.88
MRPL38-209ENST00000477736 THOC2Q8NI27 1593 aaKnown RBP33.01■■■□□ 2.88
MRPL38-209ENST00000477736 KIF21AQ7Z4S6 1674 aa32.94■■■□□ 2.86
MRPL38-209ENST00000477736 WIZO95785 1651 aa32.82■■■□□ 2.84
MRPL38-209ENST00000477736 PDS5BQ9NTI5 1447 aa32.73■■■□□ 2.83
MRPL38-209ENST00000477736 CADPSQ9ULU8 1353 aa32.59■■■□□ 2.81
MRPL38-209ENST00000477736 MRC2Q9UBG0 1479 aa32.52■■■□□ 2.8
MRPL38-209ENST00000477736 WDR62O43379 1518 aa32.5■■■□□ 2.79
MRPL38-209ENST00000477736 TOP2AP11388 1531 aaKnown RBP32.41■■■□□ 2.78
MRPL38-209ENST00000477736 CEP164Q9UPV0 1460 aa32.4■■■□□ 2.78
MRPL38-209ENST00000477736 RSF1Q96T23 1441 aaPredicted RBP32.38■■■□□ 2.77
MRPL38-209ENST00000477736 FANCD2Q9BXW9 1451 aa32.31■■■□□ 2.76
MRPL38-209ENST00000477736 PRDM2Q13029 1718 aa32.31■■■□□ 2.76
MRPL38-209ENST00000477736 CFTRP13569 1480 aa32.29■■■□□ 2.76
MRPL38-209ENST00000477736 URB2Q14146 1524 aaKnown RBP32.06■■■□□ 2.72
MRPL38-209ENST00000477736 CCDC88BA6NC98 1476 aa31.91■■■□□ 2.7
MRPL38-209ENST00000477736 TOPBP1Q92547 1522 aa31.72■■■□□ 2.67
MRPL38-209ENST00000477736 TRIM41Q8WV44 630 aa31.72■■■□□ 2.67
MRPL38-209ENST00000477736 IFT140Q96RY7 1462 aa31.72■■■□□ 2.67
MRPL38-209ENST00000477736 DNMBPQ6XZF7 1577 aa31.67■■■□□ 2.66
MRPL38-209ENST00000477736 ZNF608Q9ULD9 1512 aaPredicted RBP31.65■■■□□ 2.66
MRPL38-209ENST00000477736 ABCC8Q09428 1581 aa31.64■■■□□ 2.65
MRPL38-209ENST00000477736 OSCARQ8IYS5 282 aa31.63■■■□□ 2.65
MRPL38-209ENST00000477736 EIF4G3O43432 1585 aaKnown RBP31.63■■■□□ 2.65
MRPL38-209ENST00000477736 TARBP1Q13395 1621 aaKnown RBP31.5■■■□□ 2.63
MRPL38-209ENST00000477736 RIMBP3CA6NJZ7 1639 aa31.49■■■□□ 2.63
MRPL38-209ENST00000477736 RIMBP3BA6NNM3 1639 aa31.49■■■□□ 2.63
MRPL38-209ENST00000477736 RIMBP3Q9UFD9 1639 aa31.49■■■□□ 2.63
MRPL38-209ENST00000477736 CHD1O14646 1710 aa31.46■■■□□ 2.63
MRPL38-209ENST00000477736 POLA1P09884 1462 aaPredicted RBP31.39■■■□□ 2.62
MRPL38-209ENST00000477736 ARHGEF11O15085 1522 aa31.33■■■□□ 2.61
MRPL38-209ENST00000477736 AQRO60306 1485 aaKnown RBP eCLIP31.29■■■□□ 2.61e-6■■□□□ 11.9
MRPL38-209ENST00000477736 WDR97A6NE52 1622 aa31.25■■■□□ 2.59
MRPL38-209ENST00000477736 RAD54L2Q9Y4B4 1467 aa31.21■■■□□ 2.59
MRPL38-209ENST00000477736 FGD5Q6ZNL6 1462 aa31.2■■■□□ 2.58
MRPL38-209ENST00000477736 CUX1P39880 1505 aa31.18■■■□□ 2.58
MRPL38-209ENST00000477736 SOGA1O94964 1423 aa31.14■■■□□ 2.58
MRPL38-209ENST00000477736 SNAPC4Q5SXM2 1469 aa31.08■■■□□ 2.57
MRPL38-209ENST00000477736 TDRD9Q8NDG6 1382 aaKnown RBP31.06■■■□□ 2.56
MRPL38-209ENST00000477736 PBRM1Q86U86 1689 aa31.06■■■□□ 2.56
MRPL38-209ENST00000477736 FBLN2P98095 1184 aa31.01■■■□□ 2.55
MRPL38-209ENST00000477736 ARAP1Q96P48 1450 aa31.01■■■□□ 2.55
MRPL38-209ENST00000477736 MAGI1Q96QZ7 1491 aaPredicted RBP31.01■■■□□ 2.55
MRPL38-209ENST00000477736 CLASP1Q7Z460 1538 aa30.98■■■□□ 2.55
MRPL38-209ENST00000477736 SYNJ1O43426 1573 aa30.97■■■□□ 2.55
MRPL38-209ENST00000477736 GRIN2BQ13224 1484 aa30.96■■■□□ 2.55
MRPL38-209ENST00000477736 ABCA5Q8WWZ7 1642 aa30.91■■■□□ 2.54
MRPL38-209ENST00000477736 CYB5RLQ6IPT4 315 aa30.88■■■□□ 2.53
MRPL38-209ENST00000477736 SYNJ2O15056 1496 aa30.88■■■□□ 2.53
MRPL38-209ENST00000477736 ABCA10Q8WWZ4 1543 aa30.83■■■□□ 2.53
MRPL38-209ENST00000477736 GAPVD1Q14C86 1478 aa30.83■■■□□ 2.53
MRPL38-209ENST00000477736 SUPT5HO00267 1087 aaKnown RBP30.79■■■□□ 2.52
MRPL38-209ENST00000477736 CHMP7Q8WUX9 453 aaPredicted RBP30.79■■■□□ 2.52
MRPL38-209ENST00000477736 BIVM-ERCC5R4GMW8 1640 aa30.78■■■□□ 2.52
MRPL38-209ENST00000477736 TOP2BQ02880 1626 aa30.72■■■□□ 2.51
MRPL38-209ENST00000477736 ADAMTS12P58397 1594 aa30.68■■■□□ 2.5
MRPL38-209ENST00000477736 WRNQ14191 1432 aaPredicted RBP eCLIP30.64■■■□□ 2.49
MRPL38-209ENST00000477736 GRIN2AQ12879 1464 aa30.59■■■□□ 2.49
MRPL38-209ENST00000477736 TRHP20396 242 aaPredicted RBP30.56■■■□□ 2.48
MRPL38-209ENST00000477736 CEP170Q5SW79 1584 aa30.54■■■□□ 2.48
MRPL38-209ENST00000477736 ERICH3Q5RHP9 1530 aa30.48■■■□□ 2.47
MRPL38-209ENST00000477736 NUP160Q12769 1436 aa30.47■■■□□ 2.47
MRPL38-209ENST00000477736 SHROOM2Q13796 1616 aa30.46■■■□□ 2.47
MRPL38-209ENST00000477736 ERCC6L2Q5T890 1561 aa30.45■■■□□ 2.46
MRPL38-209ENST00000477736 FHAD1B1AJZ9 1412 aa30.43■■■□□ 2.46
MRPL38-209ENST00000477736 RUSC2Q8N2Y8 1516 aa30.27■■■□□ 2.44
MRPL38-209ENST00000477736 CUL7Q14999 1698 aa30.14■■■□□ 2.41
MRPL38-209ENST00000477736 KIF13AQ9H1H9 1805 aa30.12■■■□□ 2.41
MRPL38-209ENST00000477736 PRG4Q92954 1404 aaPredicted RBP30.11■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms