RNA–Protein interactions for RNA: ENST00000477707.5

SH3YL1-221, Transcript of SH3 and SYLF domain containing 1, humanhuman

TSL 4

Gene SH3YL1, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3YL1-221ENST00000477707 NISCHQ9Y2I1 1504 aa51.5■■■■■ 5.84
SH3YL1-221ENST00000477707 CCDC180Q9P1Z9 1646 aa45.75■■■■■ 4.91
SH3YL1-221ENST00000477707 ABCC9O60706 1549 aa44.72■■■■■ 4.75
SH3YL1-221ENST00000477707 RB1CC1Q8TDY2 1594 aa43.02■■■■■ 4.48
SH3YL1-221ENST00000477707 NACADO15069 1562 aa42.99■■■■■ 4.47
SH3YL1-221ENST00000477707 DCAF8L2P0C7V8 631 aa42.96■■■■■ 4.47
SH3YL1-221ENST00000477707 ZCCHC6Q5VYS8 1495 aaKnown RBP42.94■■■■■ 4.47
SH3YL1-221ENST00000477707 MYO15BQ96JP2 1530 aa42.75■■■■■ 4.43
SH3YL1-221ENST00000477707 DCAF1Q9Y4B6 1507 aa42.61■■■■■ 4.41
SH3YL1-221ENST00000477707 UNC13AQ9UPW8 1703 aa42.03■■■■■ 4.32
SH3YL1-221ENST00000477707 SCRIBQ14160 1630 aa41.79■■■■■ 4.28
SH3YL1-221ENST00000477707 PABPN1Q86U42 306 aaKnown RBP eCLIP41.78■■■■■ 4.28
SH3YL1-221ENST00000477707 BICRAQ9NZM4 1560 aa41.74■■■■■ 4.27
SH3YL1-221ENST00000477707 SHROOM4Q9ULL8 1493 aa41.29■■■■■ 4.2
SH3YL1-221ENST00000477707 DNAJC5BQ9UF47 199 aa40.94■■■■■ 4.14
SH3YL1-221ENST00000477707 EIF4G1Q04637 1599 aaKnown RBP40.62■■■■■ 4.09
SH3YL1-221ENST00000477707 CC2D2AQ9P2K1 1620 aa40.43■■■■■ 4.06
SH3YL1-221ENST00000477707 CECR2Q9BXF3 1484 aa40.16■■■■■ 4.02
SH3YL1-221ENST00000477707 SMARCA4P51532 1647 aa39.95■■■■□ 3.99
SH3YL1-221ENST00000477707 BAZ1AQ9NRL2 1556 aaPredicted RBP39.91■■■■□ 3.98
SH3YL1-221ENST00000477707 ATAD2BQ9ULI0 1458 aa39.72■■■■□ 3.95
SH3YL1-221ENST00000477707 MROH2BQ7Z745 1585 aa39.71■■■■□ 3.95
SH3YL1-221ENST00000477707 SMARCA2P51531 1590 aa39.67■■■■□ 3.94
SH3YL1-221ENST00000477707 NCAPD3P42695 1498 aa39.66■■■■□ 3.94
SH3YL1-221ENST00000477707 PEG3Q9GZU2 1588 aa39.55■■■■□ 3.92
SH3YL1-221ENST00000477707 HMGXB3Q12766 1538 aa39.5■■■■□ 3.91
SH3YL1-221ENST00000477707 BAZ1BQ9UIG0 1483 aaKnown RBP39.4■■■■□ 3.9
SH3YL1-221ENST00000477707 WIZO95785 1651 aa39.27■■■■□ 3.88
SH3YL1-221ENST00000477707 RSF1Q96T23 1441 aaPredicted RBP39.27■■■■□ 3.88
SH3YL1-221ENST00000477707 TOP2AP11388 1531 aaKnown RBP38.88■■■■□ 3.81
SH3YL1-221ENST00000477707 NESP48681 1621 aa38.72■■■■□ 3.79
SH3YL1-221ENST00000477707 LAMC3Q9Y6N6 1575 aa38.61■■■■□ 3.77
SH3YL1-221ENST00000477707 ERCC6Q03468 1493 aa38.53■■■■□ 3.76
SH3YL1-221ENST00000477707 CADPSQ9ULU8 1353 aa38.51■■■■□ 3.76
SH3YL1-221ENST00000477707 CCDC88BA6NC98 1476 aa38.41■■■■□ 3.74
SH3YL1-221ENST00000477707 PDS5BQ9NTI5 1447 aa38.34■■■■□ 3.73
SH3YL1-221ENST00000477707 SUPT5HO00267 1087 aaKnown RBP38.32■■■■□ 3.72
SH3YL1-221ENST00000477707 CFTRP13569 1480 aa38.31■■■■□ 3.72
SH3YL1-221ENST00000477707 KIF21AQ7Z4S6 1674 aa38.25■■■■□ 3.71
SH3YL1-221ENST00000477707 THOC2Q8NI27 1593 aaKnown RBP38.13■■■■□ 3.69
SH3YL1-221ENST00000477707 FANCD2Q9BXW9 1451 aa38.09■■■■□ 3.69
SH3YL1-221ENST00000477707 CUX2O14529 1486 aa38.08■■■■□ 3.69
SH3YL1-221ENST00000477707 CEP164Q9UPV0 1460 aa38.04■■■■□ 3.68
SH3YL1-221ENST00000477707 PRDM2Q13029 1718 aa38.01■■■■□ 3.67
SH3YL1-221ENST00000477707 MRC2Q9UBG0 1479 aa37.97■■■■□ 3.67
SH3YL1-221ENST00000477707 WDR62O43379 1518 aa37.84■■■■□ 3.65
SH3YL1-221ENST00000477707 URB2Q14146 1524 aaKnown RBP37.72■■■■□ 3.63
SH3YL1-221ENST00000477707 TOPBP1Q92547 1522 aa37.5■■■■□ 3.59
SH3YL1-221ENST00000477707 DNMBPQ6XZF7 1577 aa37.46■■■■□ 3.59
SH3YL1-221ENST00000477707 ABCC8Q09428 1581 aa37.45■■■■□ 3.59
SH3YL1-221ENST00000477707 CUX1P39880 1505 aa37.26■■■■□ 3.55
SH3YL1-221ENST00000477707 IFT140Q96RY7 1462 aa37.23■■■■□ 3.55
SH3YL1-221ENST00000477707 POLA1P09884 1462 aaPredicted RBP37.19■■■■□ 3.54
SH3YL1-221ENST00000477707 FGD5Q6ZNL6 1462 aa37.12■■■■□ 3.53
SH3YL1-221ENST00000477707 ZNF608Q9ULD9 1512 aaPredicted RBP37.08■■■■□ 3.53
SH3YL1-221ENST00000477707 TARBP1Q13395 1621 aaKnown RBP37.07■■■■□ 3.53
SH3YL1-221ENST00000477707 WRNQ14191 1432 aaPredicted RBP eCLIP37.03■■■■□ 3.52
SH3YL1-221ENST00000477707 RAD54L2Q9Y4B4 1467 aa37.02■■■■□ 3.52
SH3YL1-221ENST00000477707 SOGA1O94964 1423 aa37.01■■■■□ 3.51
SH3YL1-221ENST00000477707 SYNJ1O43426 1573 aa36.95■■■■□ 3.51
SH3YL1-221ENST00000477707 EIF4G3O43432 1585 aaKnown RBP36.94■■■■□ 3.5
SH3YL1-221ENST00000477707 TOP2BQ02880 1626 aa36.93■■■■□ 3.5
SH3YL1-221ENST00000477707 BIVM-ERCC5R4GMW8 1640 aa36.93■■■■□ 3.5
SH3YL1-221ENST00000477707 AQRO60306 1485 aaKnown RBP eCLIP36.86■■■■□ 3.49
SH3YL1-221ENST00000477707 TDRD9Q8NDG6 1382 aaKnown RBP36.81■■■■□ 3.48
SH3YL1-221ENST00000477707 WDR97A6NE52 1622 aa36.8■■■■□ 3.48
SH3YL1-221ENST00000477707 DNAJC5Q9H3Z4 198 aa36.79■■■■□ 3.48
SH3YL1-221ENST00000477707 ABCA10Q8WWZ4 1543 aa36.75■■■■□ 3.47
SH3YL1-221ENST00000477707 ABCA5Q8WWZ7 1642 aa36.6■■■■□ 3.45
SH3YL1-221ENST00000477707 GRIN2BQ13224 1484 aa36.59■■■■□ 3.45
SH3YL1-221ENST00000477707 GAPVD1Q14C86 1478 aa36.59■■■■□ 3.45
SH3YL1-221ENST00000477707 SNAPC4Q5SXM2 1469 aa36.55■■■■□ 3.44
SH3YL1-221ENST00000477707 PBRM1Q86U86 1689 aa36.51■■■■□ 3.44
SH3YL1-221ENST00000477707 MAGI1Q96QZ7 1491 aaPredicted RBP36.48■■■■□ 3.43
SH3YL1-221ENST00000477707 OSCARQ8IYS5 282 aa36.47■■■■□ 3.43
SH3YL1-221ENST00000477707 CHD1O14646 1710 aa36.44■■■■□ 3.42
SH3YL1-221ENST00000477707 FBLN2P98095 1184 aa36.38■■■■□ 3.41
SH3YL1-221ENST00000477707 SYNJ2O15056 1496 aa36.34■■■■□ 3.41
SH3YL1-221ENST00000477707 ERICH3Q5RHP9 1530 aa36.3■■■■□ 3.4
SH3YL1-221ENST00000477707 CHMP7Q8WUX9 453 aaPredicted RBP36.29■■■■□ 3.4
SH3YL1-221ENST00000477707 ADAMTS12P58397 1594 aa36.27■■■■□ 3.4
SH3YL1-221ENST00000477707 KIF27Q86VH2 1401 aa36.24■■■■□ 3.39
SH3YL1-221ENST00000477707 FHAD1B1AJZ9 1412 aa36.18■■■■□ 3.38
SH3YL1-221ENST00000477707 TRIM41Q8WV44 630 aa36.17■■■■□ 3.38
SH3YL1-221ENST00000477707 GRIN2AQ12879 1464 aa36.11■■■■□ 3.37
SH3YL1-221ENST00000477707 IGF1RP08069 1367 aa36.07■■■■□ 3.36
SH3YL1-221ENST00000477707 CLASP1Q7Z460 1538 aa36.07■■■■□ 3.36
SH3YL1-221ENST00000477707 CUL7Q14999 1698 aa35.99■■■■□ 3.35
SH3YL1-221ENST00000477707 NUP160Q12769 1436 aa35.96■■■■□ 3.35
SH3YL1-221ENST00000477707 CEP170Q5SW79 1584 aa35.95■■■■□ 3.35
SH3YL1-221ENST00000477707 RUSC2Q8N2Y8 1516 aa35.95■■■■□ 3.35
SH3YL1-221ENST00000477707 ARHGEF11O15085 1522 aa35.94■■■■□ 3.34
SH3YL1-221ENST00000477707 RIMBP3CA6NJZ7 1639 aa35.94■■■■□ 3.34
SH3YL1-221ENST00000477707 RIMBP3BA6NNM3 1639 aa35.94■■■■□ 3.34
SH3YL1-221ENST00000477707 RIMBP3Q9UFD9 1639 aa35.94■■■■□ 3.34
SH3YL1-221ENST00000477707 CARMIL1Q5VZK9 1371 aa35.87■■■■□ 3.33
SH3YL1-221ENST00000477707 CHIC1Q5VXU3 224 aa35.81■■■■□ 3.32
SH3YL1-221ENST00000477707 ARAP1Q96P48 1450 aa35.69■■■■□ 3.3
SH3YL1-221ENST00000477707 SHROOM2Q13796 1616 aa35.67■■■■□ 3.3
SH3YL1-221ENST00000477707 RAPGEF2Q9Y4G8 1499 aa35.67■■■■□ 3.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms