RNA–Protein interactions for RNA: ENST00000477279.1

MRPL43-211, Transcript of mitochondrial ribosomal protein L43, humanhuman

TSL 2 BASIC

Gene MRPL43, Length 903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL43-211ENST00000477279 NISCHQ9Y2I1 1504 aa33.23■■■□□ 2.91
MRPL43-211ENST00000477279 CCDC180Q9P1Z9 1646 aa29.71■■■□□ 2.35
MRPL43-211ENST00000477279 ABCC9O60706 1549 aa29.37■■■□□ 2.29
MRPL43-211ENST00000477279 RB1CC1Q8TDY2 1594 aa28.17■■■□□ 2.1
MRPL43-211ENST00000477279 NACADO15069 1562 aa28.07■■■□□ 2.08
MRPL43-211ENST00000477279 DCAF8L2P0C7V8 631 aa27.92■■■□□ 2.06
MRPL43-211ENST00000477279 MYO15BQ96JP2 1530 aa27.82■■■□□ 2.04
MRPL43-211ENST00000477279 ZCCHC6Q5VYS8 1495 aaKnown RBP27.57■■■□□ 2
MRPL43-211ENST00000477279 DCAF1Q9Y4B6 1507 aa27.54■■■□□ 2
MRPL43-211ENST00000477279 PABPN1Q86U42 306 aaKnown RBP eCLIP27.4■■□□□ 1.98
MRPL43-211ENST00000477279 UNC13AQ9UPW8 1703 aa27.38■■□□□ 1.97
MRPL43-211ENST00000477279 DNAJC5BQ9UF47 199 aa27.29■■□□□ 1.96
MRPL43-211ENST00000477279 BICRAQ9NZM4 1560 aa27.24■■□□□ 1.95
MRPL43-211ENST00000477279 SHROOM4Q9ULL8 1493 aa27.09■■□□□ 1.93
MRPL43-211ENST00000477279 SCRIBQ14160 1630 aa26.99■■□□□ 1.91
MRPL43-211ENST00000477279 EIF4G1Q04637 1599 aaKnown RBP26.59■■□□□ 1.85
MRPL43-211ENST00000477279 CC2D2AQ9P2K1 1620 aa26.55■■□□□ 1.84
MRPL43-211ENST00000477279 CECR2Q9BXF3 1484 aa26.49■■□□□ 1.83
MRPL43-211ENST00000477279 NCAPD3P42695 1498 aa25.91■■□□□ 1.74
MRPL43-211ENST00000477279 SMARCA4P51532 1647 aa25.82■■□□□ 1.72
MRPL43-211ENST00000477279 ATAD2BQ9ULI0 1458 aa25.82■■□□□ 1.72
MRPL43-211ENST00000477279 SMARCA2P51531 1590 aa25.81■■□□□ 1.72
MRPL43-211ENST00000477279 BAZ1AQ9NRL2 1556 aaPredicted RBP25.8■■□□□ 1.72
MRPL43-211ENST00000477279 HMGXB3Q12766 1538 aa25.72■■□□□ 1.71
MRPL43-211ENST00000477279 PEG3Q9GZU2 1588 aa25.63■■□□□ 1.69
MRPL43-211ENST00000477279 BAZ1BQ9UIG0 1483 aaKnown RBP25.6■■□□□ 1.69
MRPL43-211ENST00000477279 MROH2BQ7Z745 1585 aa25.54■■□□□ 1.68
MRPL43-211ENST00000477279 ERCC6Q03468 1493 aa25.41■■□□□ 1.66
MRPL43-211ENST00000477279 CUX2O14529 1486 aa25.31■■□□□ 1.64
MRPL43-211ENST00000477279 NESP48681 1621 aa25.27■■□□□ 1.64
MRPL43-211ENST00000477279 LAMC3Q9Y6N6 1575 aa25.27■■□□□ 1.64
MRPL43-211ENST00000477279 WIZO95785 1651 aa25.22■■□□□ 1.63
MRPL43-211ENST00000477279 RSF1Q96T23 1441 aaPredicted RBP25.16■■□□□ 1.62
MRPL43-211ENST00000477279 PDS5BQ9NTI5 1447 aa25.16■■□□□ 1.62
MRPL43-211ENST00000477279 CADPSQ9ULU8 1353 aa25.13■■□□□ 1.61
MRPL43-211ENST00000477279 TOP2AP11388 1531 aaKnown RBP25■■□□□ 1.59
MRPL43-211ENST00000477279 DNAJC5Q9H3Z4 198 aa24.99■■□□□ 1.59
MRPL43-211ENST00000477279 THOC2Q8NI27 1593 aaKnown RBP24.98■■□□□ 1.59
MRPL43-211ENST00000477279 KIF21AQ7Z4S6 1674 aa24.95■■□□□ 1.58
MRPL43-211ENST00000477279 CFTRP13569 1480 aa24.88■■□□□ 1.57
MRPL43-211ENST00000477279 MRC2Q9UBG0 1479 aa24.85■■□□□ 1.57
MRPL43-211ENST00000477279 CEP164Q9UPV0 1460 aa24.81■■□□□ 1.56
MRPL43-211ENST00000477279 FANCD2Q9BXW9 1451 aa24.8■■□□□ 1.56
MRPL43-211ENST00000477279 WDR62O43379 1518 aa24.76■■□□□ 1.55
MRPL43-211ENST00000477279 CCDC88BA6NC98 1476 aa24.7■■□□□ 1.55
MRPL43-211ENST00000477279 PRDM2Q13029 1718 aa24.58■■□□□ 1.53
MRPL43-211ENST00000477279 URB2Q14146 1524 aaKnown RBP24.53■■□□□ 1.52
MRPL43-211ENST00000477279 ABCC8Q09428 1581 aa24.44■■□□□ 1.5
MRPL43-211ENST00000477279 TOPBP1Q92547 1522 aa24.35■■□□□ 1.49
MRPL43-211ENST00000477279 IFT140Q96RY7 1462 aa24.33■■□□□ 1.49
MRPL43-211ENST00000477279 DNMBPQ6XZF7 1577 aa24.29■■□□□ 1.48
MRPL43-211ENST00000477279 OSCARQ8IYS5 282 aa24.24■■□□□ 1.47
MRPL43-211ENST00000477279 SUPT5HO00267 1087 aaKnown RBP24.23■■□□□ 1.47
MRPL43-211ENST00000477279 ZNF608Q9ULD9 1512 aaPredicted RBP24.16■■□□□ 1.46
MRPL43-211ENST00000477279 POLA1P09884 1462 aaPredicted RBP24.11■■□□□ 1.45
MRPL43-211ENST00000477279 TARBP1Q13395 1621 aaKnown RBP24.08■■□□□ 1.45
MRPL43-211ENST00000477279 SOGA1O94964 1423 aa24.06■■□□□ 1.44
MRPL43-211ENST00000477279 EIF4G3O43432 1585 aaKnown RBP24.05■■□□□ 1.44
MRPL43-211ENST00000477279 AQRO60306 1485 aaKnown RBP eCLIP24.01■■□□□ 1.435e-8■■■■□ 19.3
MRPL43-211ENST00000477279 FGD5Q6ZNL6 1462 aa23.99■■□□□ 1.43
MRPL43-211ENST00000477279 CUX1P39880 1505 aa23.99■■□□□ 1.43
MRPL43-211ENST00000477279 RAD54L2Q9Y4B4 1467 aa23.98■■□□□ 1.43
MRPL43-211ENST00000477279 WDR97A6NE52 1622 aa23.98■■□□□ 1.43
MRPL43-211ENST00000477279 TRIM41Q8WV44 630 aa23.93■■□□□ 1.42
MRPL43-211ENST00000477279 TDRD9Q8NDG6 1382 aaKnown RBP23.92■■□□□ 1.42
MRPL43-211ENST00000477279 FBLN2P98095 1184 aa23.84■■□□□ 1.41
MRPL43-211ENST00000477279 GRIN2BQ13224 1484 aa23.82■■□□□ 1.4
MRPL43-211ENST00000477279 MAGI1Q96QZ7 1491 aaPredicted RBP23.81■■□□□ 1.4
MRPL43-211ENST00000477279 CHD1O14646 1710 aa23.79■■□□□ 1.4
MRPL43-211ENST00000477279 ABCA10Q8WWZ4 1543 aa23.78■■□□□ 1.4
MRPL43-211ENST00000477279 WRNQ14191 1432 aaPredicted RBP eCLIP23.77■■□□□ 1.4
MRPL43-211ENST00000477279 SNAPC4Q5SXM2 1469 aa23.77■■□□□ 1.4
MRPL43-211ENST00000477279 CHMP7Q8WUX9 453 aaPredicted RBP23.77■■□□□ 1.4
MRPL43-211ENST00000477279 GAPVD1Q14C86 1478 aa23.75■■□□□ 1.39
MRPL43-211ENST00000477279 RIMBP3CA6NJZ7 1639 aa23.75■■□□□ 1.39
MRPL43-211ENST00000477279 RIMBP3BA6NNM3 1639 aa23.75■■□□□ 1.39
MRPL43-211ENST00000477279 RIMBP3Q9UFD9 1639 aa23.75■■□□□ 1.39
MRPL43-211ENST00000477279 ARHGEF11O15085 1522 aa23.74■■□□□ 1.39
MRPL43-211ENST00000477279 TOP2BQ02880 1626 aa23.72■■□□□ 1.39
MRPL43-211ENST00000477279 SYNJ2O15056 1496 aa23.7■■□□□ 1.38
MRPL43-211ENST00000477279 BIVM-ERCC5R4GMW8 1640 aa23.7■■□□□ 1.38
MRPL43-211ENST00000477279 ABCA5Q8WWZ7 1642 aa23.66■■□□□ 1.38
MRPL43-211ENST00000477279 SYNJ1O43426 1573 aa23.65■■□□□ 1.38
MRPL43-211ENST00000477279 PBRM1Q86U86 1689 aa23.64■■□□□ 1.38
MRPL43-211ENST00000477279 CYB5RLQ6IPT4 315 aa23.59■■□□□ 1.37
MRPL43-211ENST00000477279 CLASP1Q7Z460 1538 aa23.59■■□□□ 1.37
MRPL43-211ENST00000477279 ERICH3Q5RHP9 1530 aa23.51■■□□□ 1.35
MRPL43-211ENST00000477279 ARAP1Q96P48 1450 aa23.5■■□□□ 1.35
MRPL43-211ENST00000477279 FHAD1B1AJZ9 1412 aa23.5■■□□□ 1.35
MRPL43-211ENST00000477279 GRIN2AQ12879 1464 aa23.48■■□□□ 1.35
MRPL43-211ENST00000477279 ADAMTS12P58397 1594 aa23.46■■□□□ 1.35
MRPL43-211ENST00000477279 NUP160Q12769 1436 aa23.41■■□□□ 1.34
MRPL43-211ENST00000477279 KIF27Q86VH2 1401 aa23.33■■□□□ 1.33
MRPL43-211ENST00000477279 CEP170Q5SW79 1584 aa23.31■■□□□ 1.32
MRPL43-211ENST00000477279 IGF1RP08069 1367 aa23.26■■□□□ 1.31
MRPL43-211ENST00000477279 TRHP20396 242 aaPredicted RBP23.25■■□□□ 1.31
MRPL43-211ENST00000477279 SHROOM2Q13796 1616 aa23.23■■□□□ 1.31
MRPL43-211ENST00000477279 JPH4Q96JJ6 628 aa23.21■■□□□ 1.31
MRPL43-211ENST00000477279 CUL7Q14999 1698 aa23.19■■□□□ 1.3
MRPL43-211ENST00000477279 PRG4Q92954 1404 aaPredicted RBP23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms