RNA–Protein interactions for RNA: ENST00000476572.1

ACAP3-209, Transcript of ArfGAP with coiled-coil, ankyrin repeat and PH domains 3, humanhuman

TSL 5

Gene ACAP3, Length 819 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACAP3-209ENST00000476572 NISCHQ9Y2I1 1504 aa38.36■■■■□ 3.73
ACAP3-209ENST00000476572 ABCC9O60706 1549 aa34.69■■■■□ 3.14
ACAP3-209ENST00000476572 CCDC180Q9P1Z9 1646 aa34.6■■■■□ 3.13
ACAP3-209ENST00000476572 RB1CC1Q8TDY2 1594 aa32.99■■■□□ 2.87
ACAP3-209ENST00000476572 NACADO15069 1562 aa32.66■■■□□ 2.82
ACAP3-209ENST00000476572 DNAJC5BQ9UF47 199 aa32.61■■■□□ 2.81
ACAP3-209ENST00000476572 UNC13AQ9UPW8 1703 aa32.38■■■□□ 2.77
ACAP3-209ENST00000476572 DCAF8L2P0C7V8 631 aa32.23■■■□□ 2.75
ACAP3-209ENST00000476572 PABPN1Q86U42 306 aaKnown RBP eCLIP32.13■■■□□ 2.731e-7■■■■□ 21.5
ACAP3-209ENST00000476572 MYO15BQ96JP2 1530 aa32.1■■■□□ 2.73
ACAP3-209ENST00000476572 BICRAQ9NZM4 1560 aa32■■■□□ 2.71
ACAP3-209ENST00000476572 ZCCHC6Q5VYS8 1495 aaKnown RBP31.97■■■□□ 2.71
ACAP3-209ENST00000476572 DCAF1Q9Y4B6 1507 aa31.8■■■□□ 2.68
ACAP3-209ENST00000476572 SHROOM4Q9ULL8 1493 aa31.59■■■□□ 2.65
ACAP3-209ENST00000476572 SCRIBQ14160 1630 aa31.45■■■□□ 2.62
ACAP3-209ENST00000476572 CC2D2AQ9P2K1 1620 aa31.39■■■□□ 2.62
ACAP3-209ENST00000476572 CECR2Q9BXF3 1484 aa31.28■■■□□ 2.6
ACAP3-209ENST00000476572 EIF4G1Q04637 1599 aaKnown RBP31.26■■■□□ 2.6
ACAP3-209ENST00000476572 DNAJC5Q9H3Z4 198 aa30.17■■■□□ 2.42
ACAP3-209ENST00000476572 NCAPD3P42695 1498 aa30.07■■■□□ 2.4
ACAP3-209ENST00000476572 CUX2O14529 1486 aa30.05■■■□□ 2.4
ACAP3-209ENST00000476572 ERCC6Q03468 1493 aa30■■■□□ 2.39
ACAP3-209ENST00000476572 SMARCA4P51532 1647 aa29.97■■■□□ 2.39
ACAP3-209ENST00000476572 ATAD2BQ9ULI0 1458 aa29.97■■■□□ 2.39
ACAP3-209ENST00000476572 SMARCA2P51531 1590 aa29.94■■■□□ 2.38
ACAP3-209ENST00000476572 HMGXB3Q12766 1538 aa29.94■■■□□ 2.38
ACAP3-209ENST00000476572 BAZ1AQ9NRL2 1556 aaPredicted RBP29.76■■■□□ 2.35
ACAP3-209ENST00000476572 NESP48681 1621 aa29.71■■■□□ 2.35
ACAP3-209ENST00000476572 BAZ1BQ9UIG0 1483 aaKnown RBP29.71■■■□□ 2.35
ACAP3-209ENST00000476572 PEG3Q9GZU2 1588 aa29.67■■■□□ 2.34
ACAP3-209ENST00000476572 THOC2Q8NI27 1593 aaKnown RBP29.6■■■□□ 2.33
ACAP3-209ENST00000476572 LAMC3Q9Y6N6 1575 aa29.56■■■□□ 2.32
ACAP3-209ENST00000476572 MROH2BQ7Z745 1585 aa29.53■■■□□ 2.32
ACAP3-209ENST00000476572 KIF21AQ7Z4S6 1674 aa29.5■■■□□ 2.31
ACAP3-209ENST00000476572 RSF1Q96T23 1441 aaPredicted RBP29.3■■■□□ 2.28
ACAP3-209ENST00000476572 PDS5BQ9NTI5 1447 aa29.29■■■□□ 2.28
ACAP3-209ENST00000476572 WIZO95785 1651 aa29.16■■■□□ 2.26
ACAP3-209ENST00000476572 CADPSQ9ULU8 1353 aa29.13■■■□□ 2.25
ACAP3-209ENST00000476572 MRC2Q9UBG0 1479 aa29.11■■■□□ 2.25
ACAP3-209ENST00000476572 WDR62O43379 1518 aa29.09■■■□□ 2.25
ACAP3-209ENST00000476572 CEP164Q9UPV0 1460 aa28.95■■■□□ 2.22
ACAP3-209ENST00000476572 TOP2AP11388 1531 aaKnown RBP28.9■■■□□ 2.22
ACAP3-209ENST00000476572 FANCD2Q9BXW9 1451 aa28.86■■■□□ 2.21
ACAP3-209ENST00000476572 TRIM41Q8WV44 630 aa28.78■■■□□ 2.2
ACAP3-209ENST00000476572 CFTRP13569 1480 aa28.78■■■□□ 2.2
ACAP3-209ENST00000476572 PRDM2Q13029 1718 aa28.75■■■□□ 2.19
ACAP3-209ENST00000476572 URB2Q14146 1524 aaKnown RBP28.64■■■□□ 2.18
ACAP3-209ENST00000476572 CCDC88BA6NC98 1476 aa28.6■■■□□ 2.17
ACAP3-209ENST00000476572 SUPT5HO00267 1087 aaKnown RBP28.55■■■□□ 2.16
ACAP3-209ENST00000476572 OSCARQ8IYS5 282 aa28.48■■■□□ 2.15
ACAP3-209ENST00000476572 IFT140Q96RY7 1462 aa28.36■■■□□ 2.13
ACAP3-209ENST00000476572 RIMBP3CA6NJZ7 1639 aa28.35■■■□□ 2.13
ACAP3-209ENST00000476572 RIMBP3BA6NNM3 1639 aa28.35■■■□□ 2.13
ACAP3-209ENST00000476572 RIMBP3Q9UFD9 1639 aa28.35■■■□□ 2.13
ACAP3-209ENST00000476572 ZNF608Q9ULD9 1512 aaPredicted RBP28.32■■■□□ 2.12
ACAP3-209ENST00000476572 TOPBP1Q92547 1522 aa28.3■■■□□ 2.12
ACAP3-209ENST00000476572 EIF4G3O43432 1585 aaKnown RBP28.28■■■□□ 2.12
ACAP3-209ENST00000476572 DNMBPQ6XZF7 1577 aa28.23■■■□□ 2.11
ACAP3-209ENST00000476572 ABCC8Q09428 1581 aa28.21■■■□□ 2.11
ACAP3-209ENST00000476572 ARHGEF11O15085 1522 aa28.18■■■□□ 2.1
ACAP3-209ENST00000476572 CHD1O14646 1710 aa28.16■■■□□ 2.1
ACAP3-209ENST00000476572 TARBP1Q13395 1621 aaKnown RBP28.11■■■□□ 2.09
ACAP3-209ENST00000476572 POLA1P09884 1462 aaPredicted RBP27.99■■■□□ 2.07
ACAP3-209ENST00000476572 AQRO60306 1485 aaKnown RBP eCLIP27.98■■■□□ 2.079e-7■■■□□ 18.1
ACAP3-209ENST00000476572 WDR97A6NE52 1622 aa27.87■■■□□ 2.05
ACAP3-209ENST00000476572 ARAP1Q96P48 1450 aa27.86■■■□□ 2.05
ACAP3-209ENST00000476572 RAD54L2Q9Y4B4 1467 aa27.85■■■□□ 2.05
ACAP3-209ENST00000476572 CYB5RLQ6IPT4 315 aa27.83■■■□□ 2.05
ACAP3-209ENST00000476572 FBLN2P98095 1184 aa27.81■■■□□ 2.04
ACAP3-209ENST00000476572 FGD5Q6ZNL6 1462 aa27.78■■■□□ 2.04
ACAP3-209ENST00000476572 SNAPC4Q5SXM2 1469 aa27.77■■■□□ 2.04
ACAP3-209ENST00000476572 SOGA1O94964 1423 aa27.77■■■□□ 2.04
ACAP3-209ENST00000476572 TDRD9Q8NDG6 1382 aaKnown RBP27.74■■■□□ 2.03
ACAP3-209ENST00000476572 CLASP1Q7Z460 1538 aa27.74■■■□□ 2.03
ACAP3-209ENST00000476572 SYNJ1O43426 1573 aa27.72■■■□□ 2.03
ACAP3-209ENST00000476572 CUX1P39880 1505 aa27.72■■■□□ 2.03
ACAP3-209ENST00000476572 MAGI1Q96QZ7 1491 aaPredicted RBP27.7■■■□□ 2.02
ACAP3-209ENST00000476572 PBRM1Q86U86 1689 aa27.68■■■□□ 2.02
ACAP3-209ENST00000476572 TRHP20396 242 aaPredicted RBP27.63■■■□□ 2.01
ACAP3-209ENST00000476572 GRIN2BQ13224 1484 aa27.63■■■□□ 2.01
ACAP3-209ENST00000476572 WRNQ14191 1432 aaPredicted RBP eCLIP27.58■■■□□ 2.01
ACAP3-209ENST00000476572 SYNJ2O15056 1496 aa27.58■■■□□ 2.01
ACAP3-209ENST00000476572 CHMP7Q8WUX9 453 aaPredicted RBP27.56■■■□□ 2
ACAP3-209ENST00000476572 ABCA5Q8WWZ7 1642 aa27.52■■■□□ 2
ACAP3-209ENST00000476572 GAPVD1Q14C86 1478 aa27.49■■□□□ 1.99
ACAP3-209ENST00000476572 TOP2BQ02880 1626 aa27.45■■□□□ 1.99
ACAP3-209ENST00000476572 ABCA10Q8WWZ4 1543 aa27.45■■□□□ 1.98
ACAP3-209ENST00000476572 BIVM-ERCC5R4GMW8 1640 aa27.41■■□□□ 1.98
ACAP3-209ENST00000476572 ADAMTS12P58397 1594 aa27.33■■□□□ 1.97
ACAP3-209ENST00000476572 GRIN2AQ12879 1464 aa27.3■■□□□ 1.96
ACAP3-209ENST00000476572 CEP170Q5SW79 1584 aa27.26■■□□□ 1.95
ACAP3-209ENST00000476572 ERCC6L2Q5T890 1561 aa27.25■■□□□ 1.95
ACAP3-209ENST00000476572 SHROOM2Q13796 1616 aa27.19■■□□□ 1.94
ACAP3-209ENST00000476572 NUP160Q12769 1436 aa27.19■■□□□ 1.94
ACAP3-209ENST00000476572 ERICH3Q5RHP9 1530 aa27.12■■□□□ 1.93
ACAP3-209ENST00000476572 FHAD1B1AJZ9 1412 aa27.12■■□□□ 1.93
ACAP3-209ENST00000476572 KIF13AQ9H1H9 1805 aa27.05■■□□□ 1.92
ACAP3-209ENST00000476572 AEBP2Q6ZN18 517 aaPredicted RBP27.04■■□□□ 1.92
ACAP3-209ENST00000476572 KIF27Q86VH2 1401 aa27.01■■□□□ 1.91
ACAP3-209ENST00000476572 RUSC2Q8N2Y8 1516 aa26.97■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms