RNA–Protein interactions for RNA: ENST00000476461.1

PSMD2-213, Transcript of proteasome 26S subunit, non-ATPase 2, humanhuman

TSL 3

Gene PSMD2, Length 816 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD2-213ENST00000476461 NISCHQ9Y2I1 1504 aa47.15■■■■■ 5.14
PSMD2-213ENST00000476461 CCDC180Q9P1Z9 1646 aa41.84■■■■■ 4.29
PSMD2-213ENST00000476461 ABCC9O60706 1549 aa40.77■■■■■ 4.12
PSMD2-213ENST00000476461 ZCCHC6Q5VYS8 1495 aaKnown RBP39.31■■■■□ 3.88
PSMD2-213ENST00000476461 RB1CC1Q8TDY2 1594 aa39.28■■■■□ 3.88
PSMD2-213ENST00000476461 NACADO15069 1562 aa39.27■■■■□ 3.88
PSMD2-213ENST00000476461 DCAF8L2P0C7V8 631 aa39.27■■■■□ 3.88
PSMD2-213ENST00000476461 MYO15BQ96JP2 1530 aa39.08■■■■□ 3.85
PSMD2-213ENST00000476461 DCAF1Q9Y4B6 1507 aa38.99■■■■□ 3.83
PSMD2-213ENST00000476461 DNAJC5BQ9UF47 199 aa38.62■■■■□ 3.77
PSMD2-213ENST00000476461 UNC13AQ9UPW8 1703 aa38.47■■■■□ 3.75
PSMD2-213ENST00000476461 SCRIBQ14160 1630 aa38.21■■■■□ 3.71
PSMD2-213ENST00000476461 BICRAQ9NZM4 1560 aa38.14■■■■□ 3.7
PSMD2-213ENST00000476461 PABPN1Q86U42 306 aaKnown RBP eCLIP38.13■■■■□ 3.69
PSMD2-213ENST00000476461 SHROOM4Q9ULL8 1493 aa37.67■■■■□ 3.62
PSMD2-213ENST00000476461 EIF4G1Q04637 1599 aaKnown RBP37.09■■■■□ 3.53
PSMD2-213ENST00000476461 CC2D2AQ9P2K1 1620 aa36.91■■■■□ 3.5
PSMD2-213ENST00000476461 CECR2Q9BXF3 1484 aa36.74■■■■□ 3.47
PSMD2-213ENST00000476461 SMARCA4P51532 1647 aa36.56■■■■□ 3.44
PSMD2-213ENST00000476461 BAZ1AQ9NRL2 1556 aaPredicted RBP36.5■■■■□ 3.43
PSMD2-213ENST00000476461 MROH2BQ7Z745 1585 aa36.36■■■■□ 3.41
PSMD2-213ENST00000476461 ATAD2BQ9ULI0 1458 aa36.3■■■■□ 3.4
PSMD2-213ENST00000476461 SMARCA2P51531 1590 aa36.24■■■■□ 3.39
PSMD2-213ENST00000476461 NCAPD3P42695 1498 aa36.24■■■■□ 3.39
PSMD2-213ENST00000476461 PEG3Q9GZU2 1588 aa36.19■■■■□ 3.38
PSMD2-213ENST00000476461 HMGXB3Q12766 1538 aa36.08■■■■□ 3.37
PSMD2-213ENST00000476461 BAZ1BQ9UIG0 1483 aaKnown RBP35.99■■■■□ 3.35
PSMD2-213ENST00000476461 WIZO95785 1651 aa35.99■■■■□ 3.35
PSMD2-213ENST00000476461 RSF1Q96T23 1441 aaPredicted RBP35.99■■■■□ 3.35
PSMD2-213ENST00000476461 DNAJC5Q9H3Z4 198 aa35.74■■■■□ 3.31
PSMD2-213ENST00000476461 TOP2AP11388 1531 aaKnown RBP35.58■■■■□ 3.29
PSMD2-213ENST00000476461 NESP48681 1621 aa35.36■■■■□ 3.25
PSMD2-213ENST00000476461 LAMC3Q9Y6N6 1575 aa35.25■■■■□ 3.23
PSMD2-213ENST00000476461 CADPSQ9ULU8 1353 aa35.18■■■■□ 3.22
PSMD2-213ENST00000476461 SUPT5HO00267 1087 aaKnown RBP35.18■■■■□ 3.22
PSMD2-213ENST00000476461 CCDC88BA6NC98 1476 aa35.16■■■■□ 3.22
PSMD2-213ENST00000476461 ERCC6Q03468 1493 aa35.09■■■■□ 3.21
PSMD2-213ENST00000476461 CUX2O14529 1486 aa35.06■■■■□ 3.2
PSMD2-213ENST00000476461 CFTRP13569 1480 aa35.03■■■■□ 3.2
PSMD2-213ENST00000476461 PDS5BQ9NTI5 1447 aa34.98■■■■□ 3.19
PSMD2-213ENST00000476461 KIF21AQ7Z4S6 1674 aa34.96■■■■□ 3.19
PSMD2-213ENST00000476461 PRDM2Q13029 1718 aa34.81■■■■□ 3.16
PSMD2-213ENST00000476461 THOC2Q8NI27 1593 aaKnown RBP34.79■■■■□ 3.16
PSMD2-213ENST00000476461 FANCD2Q9BXW9 1451 aa34.79■■■■□ 3.16
PSMD2-213ENST00000476461 CEP164Q9UPV0 1460 aa34.72■■■■□ 3.15
PSMD2-213ENST00000476461 MRC2Q9UBG0 1479 aa34.65■■■■□ 3.14
PSMD2-213ENST00000476461 WDR62O43379 1518 aa34.55■■■■□ 3.12
PSMD2-213ENST00000476461 URB2Q14146 1524 aaKnown RBP34.47■■■■□ 3.11
PSMD2-213ENST00000476461 TOPBP1Q92547 1522 aa34.27■■■■□ 3.08
PSMD2-213ENST00000476461 DNMBPQ6XZF7 1577 aa34.24■■■■□ 3.07
PSMD2-213ENST00000476461 ABCC8Q09428 1581 aa34.23■■■■□ 3.07
PSMD2-213ENST00000476461 CUX1P39880 1505 aa34.1■■■■□ 3.05
PSMD2-213ENST00000476461 TRIM41Q8WV44 630 aa34.09■■■■□ 3.05
PSMD2-213ENST00000476461 POLA1P09884 1462 aaPredicted RBP34■■■■□ 3.03
PSMD2-213ENST00000476461 IFT140Q96RY7 1462 aa33.99■■■■□ 3.03
PSMD2-213ENST00000476461 FGD5Q6ZNL6 1462 aa33.94■■■■□ 3.02
PSMD2-213ENST00000476461 TARBP1Q13395 1621 aaKnown RBP33.91■■■■□ 3.02
PSMD2-213ENST00000476461 WRNQ14191 1432 aaPredicted RBP eCLIP33.9■■■■□ 3.02
PSMD2-213ENST00000476461 ZNF608Q9ULD9 1512 aaPredicted RBP33.87■■■■□ 3.01
PSMD2-213ENST00000476461 SYNJ1O43426 1573 aa33.86■■■■□ 3.01
PSMD2-213ENST00000476461 RAD54L2Q9Y4B4 1467 aa33.86■■■■□ 3.01
PSMD2-213ENST00000476461 BIVM-ERCC5R4GMW8 1640 aa33.84■■■■□ 3.01
PSMD2-213ENST00000476461 TOP2BQ02880 1626 aa33.83■■■■□ 3.01
PSMD2-213ENST00000476461 SOGA1O94964 1423 aa33.83■■■■□ 3.01
PSMD2-213ENST00000476461 EIF4G3O43432 1585 aaKnown RBP33.73■■■□□ 2.99
PSMD2-213ENST00000476461 WDR97A6NE52 1622 aa33.68■■■□□ 2.98
PSMD2-213ENST00000476461 AQRO60306 1485 aaKnown RBP eCLIP33.68■■■□□ 2.982e-6■■■□□ 15.2
PSMD2-213ENST00000476461 TDRD9Q8NDG6 1382 aaKnown RBP33.64■■■□□ 2.98
PSMD2-213ENST00000476461 ABCA10Q8WWZ4 1543 aa33.6■■■□□ 2.97
PSMD2-213ENST00000476461 ABCA5Q8WWZ7 1642 aa33.49■■■□□ 2.95
PSMD2-213ENST00000476461 GAPVD1Q14C86 1478 aa33.45■■■□□ 2.95
PSMD2-213ENST00000476461 GRIN2BQ13224 1484 aa33.42■■■□□ 2.94
PSMD2-213ENST00000476461 PBRM1Q86U86 1689 aa33.41■■■□□ 2.94
PSMD2-213ENST00000476461 OSCARQ8IYS5 282 aa33.38■■■□□ 2.93
PSMD2-213ENST00000476461 SNAPC4Q5SXM2 1469 aa33.37■■■□□ 2.93
PSMD2-213ENST00000476461 MAGI1Q96QZ7 1491 aaPredicted RBP33.31■■■□□ 2.92
PSMD2-213ENST00000476461 CHD1O14646 1710 aa33.29■■■□□ 2.92
PSMD2-213ENST00000476461 FBLN2P98095 1184 aa33.2■■■□□ 2.91
PSMD2-213ENST00000476461 ERICH3Q5RHP9 1530 aa33.19■■■□□ 2.9
PSMD2-213ENST00000476461 SYNJ2O15056 1496 aa33.18■■■□□ 2.9
PSMD2-213ENST00000476461 KIF27Q86VH2 1401 aa33.16■■■□□ 2.9
PSMD2-213ENST00000476461 ADAMTS12P58397 1594 aa33.15■■■□□ 2.9
PSMD2-213ENST00000476461 RIMBP3CA6NJZ7 1639 aa33.14■■■□□ 2.9
PSMD2-213ENST00000476461 RIMBP3BA6NNM3 1639 aa33.14■■■□□ 2.9
PSMD2-213ENST00000476461 RIMBP3Q9UFD9 1639 aa33.14■■■□□ 2.9
PSMD2-213ENST00000476461 CHMP7Q8WUX9 453 aaPredicted RBP33.12■■■□□ 2.89
PSMD2-213ENST00000476461 FHAD1B1AJZ9 1412 aa33.06■■■□□ 2.88
PSMD2-213ENST00000476461 IGF1RP08069 1367 aa33.04■■■□□ 2.88
PSMD2-213ENST00000476461 GRIN2AQ12879 1464 aa33■■■□□ 2.87
PSMD2-213ENST00000476461 RUSC2Q8N2Y8 1516 aa32.99■■■□□ 2.87
PSMD2-213ENST00000476461 CHIC1Q5VXU3 224 aa32.94■■■□□ 2.86
PSMD2-213ENST00000476461 CUL7Q14999 1698 aa32.94■■■□□ 2.86
PSMD2-213ENST00000476461 ARHGEF11O15085 1522 aa32.92■■■□□ 2.86
PSMD2-213ENST00000476461 CLASP1Q7Z460 1538 aa32.92■■■□□ 2.86
PSMD2-213ENST00000476461 CEP170Q5SW79 1584 aa32.87■■■□□ 2.85
PSMD2-213ENST00000476461 NUP160Q12769 1436 aa32.85■■■□□ 2.85
PSMD2-213ENST00000476461 CARMIL1Q5VZK9 1371 aa32.83■■■□□ 2.85
PSMD2-213ENST00000476461 CYB5RLQ6IPT4 315 aa32.74■■■□□ 2.83
PSMD2-213ENST00000476461 RAPGEF2Q9Y4G8 1499 aa32.65■■■□□ 2.82
PSMD2-213ENST00000476461 EEA1Q15075 1411 aa32.61■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms