RNA–Protein interactions for RNA: ENST00000476423.5

SZRD1-208, Transcript of SUZ RNA binding domain containing 1, humanhuman

TSL 4

Gene SZRD1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SZRD1-208ENST00000476423 NISCHQ9Y2I1 1504 aa20.22■□□□□ 0.83
SZRD1-208ENST00000476423 ABCC9O60706 1549 aa19.46■□□□□ 0.71
SZRD1-208ENST00000476423 DNAJC5BQ9UF47 199 aa19.07■□□□□ 0.64
SZRD1-208ENST00000476423 CCDC180Q9P1Z9 1646 aa18.58■□□□□ 0.56
SZRD1-208ENST00000476423 DNAJC5Q9H3Z4 198 aa18.36■□□□□ 0.53
SZRD1-208ENST00000476423 RB1CC1Q8TDY2 1594 aa18.2■□□□□ 0.5
SZRD1-208ENST00000476423 PABPN1Q86U42 306 aaKnown RBP eCLIP17.98■□□□□ 0.47
SZRD1-208ENST00000476423 NACADO15069 1562 aa17.84■□□□□ 0.45
SZRD1-208ENST00000476423 CECR2Q9BXF3 1484 aa17.67■□□□□ 0.42
SZRD1-208ENST00000476423 UNC13AQ9UPW8 1703 aa17.63■□□□□ 0.41
SZRD1-208ENST00000476423 DCAF8L2P0C7V8 631 aa17.59■□□□□ 0.41
SZRD1-208ENST00000476423 BICRAQ9NZM4 1560 aa17.56■□□□□ 0.4
SZRD1-208ENST00000476423 CC2D2AQ9P2K1 1620 aa17.54■□□□□ 0.4
SZRD1-208ENST00000476423 SHROOM4Q9ULL8 1493 aa17.41■□□□□ 0.38
SZRD1-208ENST00000476423 MYO15BQ96JP2 1530 aa17.31■□□□□ 0.36
SZRD1-208ENST00000476423 EIF4G1Q04637 1599 aaKnown RBP17.27■□□□□ 0.35
SZRD1-208ENST00000476423 CUX2O14529 1486 aa17.26■□□□□ 0.35
SZRD1-208ENST00000476423 TRIM41Q8WV44 630 aa17.12■□□□□ 0.33
SZRD1-208ENST00000476423 ERCC6Q03468 1493 aa16.95■□□□□ 0.3
SZRD1-208ENST00000476423 SCRIBQ14160 1630 aa16.83■□□□□ 0.28
SZRD1-208ENST00000476423 DCAF1Q9Y4B6 1507 aa16.7■□□□□ 0.26
SZRD1-208ENST00000476423 AEBP2Q6ZN18 517 aaPredicted RBP16.65■□□□□ 0.26
SZRD1-208ENST00000476423 ZCCHC6Q5VYS8 1495 aaKnown RBP16.56■□□□□ 0.24
SZRD1-208ENST00000476423 NCAPD3P42695 1498 aa16.48■□□□□ 0.23
SZRD1-208ENST00000476423 THOC2Q8NI27 1593 aaKnown RBP16.43■□□□□ 0.22
SZRD1-208ENST00000476423 OSCARQ8IYS5 282 aa16.4■□□□□ 0.22
SZRD1-208ENST00000476423 NESP48681 1621 aa16.38■□□□□ 0.21
SZRD1-208ENST00000476423 LAMC3Q9Y6N6 1575 aa16.26■□□□□ 0.19
SZRD1-208ENST00000476423 PDS5BQ9NTI5 1447 aa16.26■□□□□ 0.19
SZRD1-208ENST00000476423 SMARCA2P51531 1590 aa16.25■□□□□ 0.19
SZRD1-208ENST00000476423 BAZ1AQ9NRL2 1556 aaPredicted RBP16.24■□□□□ 0.19
SZRD1-208ENST00000476423 ATAD2BQ9ULI0 1458 aa16.23■□□□□ 0.19
SZRD1-208ENST00000476423 HMGXB3Q12766 1538 aa16.23■□□□□ 0.19
SZRD1-208ENST00000476423 TRHP20396 242 aaPredicted RBP16.19■□□□□ 0.18
SZRD1-208ENST00000476423 KIF21AQ7Z4S6 1674 aa16.15■□□□□ 0.18
SZRD1-208ENST00000476423 RIMBP3CA6NJZ7 1639 aa16.11■□□□□ 0.17
SZRD1-208ENST00000476423 RIMBP3BA6NNM3 1639 aa16.11■□□□□ 0.17
SZRD1-208ENST00000476423 RIMBP3Q9UFD9 1639 aa16.11■□□□□ 0.17
SZRD1-208ENST00000476423 MRC2Q9UBG0 1479 aa16.08■□□□□ 0.16
SZRD1-208ENST00000476423 CHIC1Q5VXU3 224 aa16.06■□□□□ 0.16
SZRD1-208ENST00000476423 BAZ1BQ9UIG0 1483 aaKnown RBP16.05■□□□□ 0.16
SZRD1-208ENST00000476423 WDR62O43379 1518 aa16.04■□□□□ 0.16
SZRD1-208ENST00000476423 CYB5RLQ6IPT4 315 aa16.01■□□□□ 0.15
SZRD1-208ENST00000476423 ARHGEF11O15085 1522 aa15.98■□□□□ 0.15
SZRD1-208ENST00000476423 SMARCA4P51532 1647 aa15.94■□□□□ 0.14
SZRD1-208ENST00000476423 CADPSQ9ULU8 1353 aa15.94■□□□□ 0.14
SZRD1-208ENST00000476423 CEP164Q9UPV0 1460 aa15.84■□□□□ 0.13
SZRD1-208ENST00000476423 PEG3Q9GZU2 1588 aa15.83■□□□□ 0.13
SZRD1-208ENST00000476423 ILDR1Q86SU0 546 aaPredicted RBP15.83■□□□□ 0.12
SZRD1-208ENST00000476423 ARAP1Q96P48 1450 aa15.72■□□□□ 0.11
SZRD1-208ENST00000476423 FANCD2Q9BXW9 1451 aa15.71■□□□□ 0.11
SZRD1-208ENST00000476423 RSF1Q96T23 1441 aaPredicted RBP15.67■□□□□ 0.1
SZRD1-208ENST00000476423 IFT140Q96RY7 1462 aa15.58■□□□□ 0.08
SZRD1-208ENST00000476423 URB2Q14146 1524 aaKnown RBP15.58■□□□□ 0.08
SZRD1-208ENST00000476423 ZNF608Q9ULD9 1512 aaPredicted RBP15.53■□□□□ 0.08
SZRD1-208ENST00000476423 FBLN2P98095 1184 aa15.52■□□□□ 0.08
SZRD1-208ENST00000476423 CFTRP13569 1480 aa15.52■□□□□ 0.07
SZRD1-208ENST00000476423 MROH2BQ7Z745 1585 aa15.51■□□□□ 0.07
SZRD1-208ENST00000476423 CHD1O14646 1710 aa15.47■□□□□ 0.07
SZRD1-208ENST00000476423 EIF4G3O43432 1585 aaKnown RBP15.41■□□□□ 0.06
SZRD1-208ENST00000476423 ABCC8Q09428 1581 aa15.35■□□□□ 0.05
SZRD1-208ENST00000476423 AQRO60306 1485 aaKnown RBP eCLIP15.33■□□□□ 0.044e-8■■■■□ 22.5
SZRD1-208ENST00000476423 KDM4FA0A1W2PPD8 638 aa15.29■□□□□ 0.04
SZRD1-208ENST00000476423 SYNJ1O43426 1573 aa15.28■□□□□ 0.04
SZRD1-208ENST00000476423 CLASP1Q7Z460 1538 aa15.28■□□□□ 0.04
SZRD1-208ENST00000476423 TOPBP1Q92547 1522 aa15.28■□□□□ 0.04
SZRD1-208ENST00000476423 CHMP7Q8WUX9 453 aaPredicted RBP15.28■□□□□ 0.04
SZRD1-208ENST00000476423 WIZO95785 1651 aa15.27■□□□□ 0.03
SZRD1-208ENST00000476423 GAPVD1Q14C86 1478 aa15.27■□□□□ 0.03
SZRD1-208ENST00000476423 PRDM2Q13029 1718 aa15.25■□□□□ 0.03
SZRD1-208ENST00000476423 FBXO41Q8TF61 875 aa15.2■□□□□ 0.02
SZRD1-208ENST00000476423 TARBP1Q13395 1621 aaKnown RBP15.2■□□□□ 0.02
SZRD1-208ENST00000476423 ERCC6L2Q5T890 1561 aa15.16■□□□□ 0.02
SZRD1-208ENST00000476423 DNMBPQ6XZF7 1577 aa15.15■□□□□ 0.02
SZRD1-208ENST00000476423 SNAPC4Q5SXM2 1469 aa15.12■□□□□ 0.01
SZRD1-208ENST00000476423 MAGI1Q96QZ7 1491 aaPredicted RBP15.12■□□□□ 0.01
SZRD1-208ENST00000476423 KIF13AQ9H1H9 1805 aa15.1■□□□□ 0.01
SZRD1-208ENST00000476423 WDR97A6NE52 1622 aa15.1■□□□□ 0.01
SZRD1-208ENST00000476423 TDRD9Q8NDG6 1382 aaKnown RBP15.1■□□□□ 0.01
SZRD1-208ENST00000476423 SYNJ2O15056 1496 aa15.07■□□□□ 0
SZRD1-208ENST00000476423 FAM69CQ0P6D2 419 aa15.06■□□□□ 0
SZRD1-208ENST00000476423 SOGA1O94964 1423 aa15.06■□□□□ 0
SZRD1-208ENST00000476423 POLA1P09884 1462 aaPredicted RBP15.06■□□□□ 0
SZRD1-208ENST00000476423 TOP2AP11388 1531 aaKnown RBP15.06■□□□□ 0
SZRD1-208ENST00000476423 KDM6BO15054 1643 aa15.03■□□□□ -0
SZRD1-208ENST00000476423 LMTK3Q96Q04 1460 aa15.03■□□□□ -0
SZRD1-208ENST00000476423 GRIN2BQ13224 1484 aa15.02■□□□□ -0
SZRD1-208ENST00000476423 NPM1P06748 294 aaKnown RBP eCLIP15.02■□□□□ -0
SZRD1-208ENST00000476423 HECW2Q9P2P5 1572 aa15□□□□□ -0.01
SZRD1-208ENST00000476423 RAD54L2Q9Y4B4 1467 aa14.99□□□□□ -0.01
SZRD1-208ENST00000476423 ABCC10Q5T3U5 1492 aa14.98□□□□□ -0.01
SZRD1-208ENST00000476423 SOCS7O14512 581 aa14.98□□□□□ -0.01
SZRD1-208ENST00000476423 ADGRL1O94910 1474 aa14.92□□□□□ -0.02
SZRD1-208ENST00000476423 CCDC88BA6NC98 1476 aa14.9□□□□□ -0.02
SZRD1-208ENST00000476423 CEP170Q5SW79 1584 aa14.88□□□□□ -0.03
SZRD1-208ENST00000476423 MAPKBP1O60336 1514 aa14.86□□□□□ -0.03
SZRD1-208ENST00000476423 DIP2BQ9P265 1576 aa14.85□□□□□ -0.03
SZRD1-208ENST00000476423 FGD5Q6ZNL6 1462 aa14.82□□□□□ -0.04
SZRD1-208ENST00000476423 PBRM1Q86U86 1689 aa14.81□□□□□ -0.04
SZRD1-208ENST00000476423 TSPOAP1O95153 1857 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms