RNA–Protein interactions for RNA: ENST00000476394.5

ZEB2-220, Transcript of zinc finger E-box binding homeobox 2, humanhuman

TSL 3

Gene ZEB2, Length 601 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB2-220ENST00000476394 NISCHQ9Y2I1 1504 aa23.68■■□□□ 1.38
ZEB2-220ENST00000476394 CCDC180Q9P1Z9 1646 aa20.93■□□□□ 0.94
ZEB2-220ENST00000476394 ABCC9O60706 1549 aa19.86■□□□□ 0.77
ZEB2-220ENST00000476394 ZCCHC6Q5VYS8 1495 aaKnown RBP19.85■□□□□ 0.77
ZEB2-220ENST00000476394 DCAF1Q9Y4B6 1507 aa19.64■□□□□ 0.73
ZEB2-220ENST00000476394 MYO15BQ96JP2 1530 aa19.53■□□□□ 0.72
ZEB2-220ENST00000476394 NACADO15069 1562 aa19.48■□□□□ 0.71
ZEB2-220ENST00000476394 DCAF8L2P0C7V8 631 aa19.43■□□□□ 0.7
ZEB2-220ENST00000476394 RB1CC1Q8TDY2 1594 aa19.39■□□□□ 0.69
ZEB2-220ENST00000476394 SCRIBQ14160 1630 aa19.07■□□□□ 0.64
ZEB2-220ENST00000476394 UNC13AQ9UPW8 1703 aa19.05■□□□□ 0.64
ZEB2-220ENST00000476394 SHROOM4Q9ULL8 1493 aa18.94■□□□□ 0.62
ZEB2-220ENST00000476394 BICRAQ9NZM4 1560 aa18.79■□□□□ 0.6
ZEB2-220ENST00000476394 PABPN1Q86U42 306 aaKnown RBP eCLIP18.57■□□□□ 0.56
ZEB2-220ENST00000476394 CECR2Q9BXF3 1484 aa18.35■□□□□ 0.53
ZEB2-220ENST00000476394 BAZ1AQ9NRL2 1556 aaPredicted RBP18.34■□□□□ 0.53
ZEB2-220ENST00000476394 SMARCA4P51532 1647 aa18.31■□□□□ 0.52
ZEB2-220ENST00000476394 MROH2BQ7Z745 1585 aa18.25■□□□□ 0.51
ZEB2-220ENST00000476394 EIF4G1Q04637 1599 aaKnown RBP18.24■□□□□ 0.51
ZEB2-220ENST00000476394 RSF1Q96T23 1441 aaPredicted RBP18.2■□□□□ 0.5
ZEB2-220ENST00000476394 WIZO95785 1651 aa18.12■□□□□ 0.49
ZEB2-220ENST00000476394 PEG3Q9GZU2 1588 aa18.12■□□□□ 0.49
ZEB2-220ENST00000476394 SMARCA2P51531 1590 aa18.05■□□□□ 0.48
ZEB2-220ENST00000476394 SUPT5HO00267 1087 aaKnown RBP18.04■□□□□ 0.48
ZEB2-220ENST00000476394 CC2D2AQ9P2K1 1620 aa18.04■□□□□ 0.48
ZEB2-220ENST00000476394 ATAD2BQ9ULI0 1458 aa18.01■□□□□ 0.47
ZEB2-220ENST00000476394 TOP2AP11388 1531 aaKnown RBP17.95■□□□□ 0.46
ZEB2-220ENST00000476394 HMGXB3Q12766 1538 aa17.94■□□□□ 0.46
ZEB2-220ENST00000476394 NCAPD3P42695 1498 aa17.92■□□□□ 0.46
ZEB2-220ENST00000476394 BAZ1BQ9UIG0 1483 aaKnown RBP17.91■□□□□ 0.46
ZEB2-220ENST00000476394 DNAJC5BQ9UF47 199 aa17.69■□□□□ 0.42
ZEB2-220ENST00000476394 CCDC88BA6NC98 1476 aa17.69■□□□□ 0.42
ZEB2-220ENST00000476394 PRDM2Q13029 1718 aa17.52■□□□□ 0.39
ZEB2-220ENST00000476394 CFTRP13569 1480 aa17.44■□□□□ 0.38
ZEB2-220ENST00000476394 LAMC3Q9Y6N6 1575 aa17.43■□□□□ 0.38
ZEB2-220ENST00000476394 CADPSQ9ULU8 1353 aa17.4■□□□□ 0.38
ZEB2-220ENST00000476394 NESP48681 1621 aa17.35■□□□□ 0.37
ZEB2-220ENST00000476394 KIF21AQ7Z4S6 1674 aa17.26■□□□□ 0.35
ZEB2-220ENST00000476394 FANCD2Q9BXW9 1451 aa17.24■□□□□ 0.35
ZEB2-220ENST00000476394 ABCC8Q09428 1581 aa17.23■□□□□ 0.35
ZEB2-220ENST00000476394 PDS5BQ9NTI5 1447 aa17.22■□□□□ 0.35
ZEB2-220ENST00000476394 CEP164Q9UPV0 1460 aa17.18■□□□□ 0.34
ZEB2-220ENST00000476394 CHIC1Q5VXU3 224 aa17.16■□□□□ 0.34
ZEB2-220ENST00000476394 BIVM-ERCC5R4GMW8 1640 aa17.15■□□□□ 0.34
ZEB2-220ENST00000476394 WRNQ14191 1432 aaPredicted RBP eCLIP17.14■□□□□ 0.33
ZEB2-220ENST00000476394 SYNJ1O43426 1573 aa17.14■□□□□ 0.33
ZEB2-220ENST00000476394 TOP2BQ02880 1626 aa17.12■□□□□ 0.33
ZEB2-220ENST00000476394 CUX1P39880 1505 aa17.11■□□□□ 0.33
ZEB2-220ENST00000476394 DNMBPQ6XZF7 1577 aa17.09■□□□□ 0.33
ZEB2-220ENST00000476394 ERCC6Q03468 1493 aa17.07■□□□□ 0.32
ZEB2-220ENST00000476394 THOC2Q8NI27 1593 aaKnown RBP17.06■□□□□ 0.32
ZEB2-220ENST00000476394 MRC2Q9UBG0 1479 aa17.05■□□□□ 0.32
ZEB2-220ENST00000476394 URB2Q14146 1524 aaKnown RBP17.05■□□□□ 0.32
ZEB2-220ENST00000476394 TOPBP1Q92547 1522 aa17.03■□□□□ 0.32
ZEB2-220ENST00000476394 TRIM41Q8WV44 630 aa17.03■□□□□ 0.32
ZEB2-220ENST00000476394 WDR62O43379 1518 aa17.01■□□□□ 0.31
ZEB2-220ENST00000476394 FGD5Q6ZNL6 1462 aa16.95■□□□□ 0.3
ZEB2-220ENST00000476394 POLA1P09884 1462 aaPredicted RBP16.92■□□□□ 0.3
ZEB2-220ENST00000476394 WDR97A6NE52 1622 aa16.9■□□□□ 0.3
ZEB2-220ENST00000476394 TARBP1Q13395 1621 aaKnown RBP16.85■□□□□ 0.29
ZEB2-220ENST00000476394 CUX2O14529 1486 aa16.82■□□□□ 0.28
ZEB2-220ENST00000476394 ABCA10Q8WWZ4 1543 aa16.81■□□□□ 0.28
ZEB2-220ENST00000476394 RAD54L2Q9Y4B4 1467 aa16.81■□□□□ 0.28
ZEB2-220ENST00000476394 SOGA1O94964 1423 aa16.81■□□□□ 0.28
ZEB2-220ENST00000476394 IFT140Q96RY7 1462 aa16.79■□□□□ 0.28
ZEB2-220ENST00000476394 EEA1Q15075 1411 aa16.79■□□□□ 0.28
ZEB2-220ENST00000476394 ABCA5Q8WWZ7 1642 aa16.76■□□□□ 0.27
ZEB2-220ENST00000476394 RUSC2Q8N2Y8 1516 aa16.75■□□□□ 0.27
ZEB2-220ENST00000476394 KIF27Q86VH2 1401 aa16.74■□□□□ 0.27
ZEB2-220ENST00000476394 PBRM1Q86U86 1689 aa16.72■□□□□ 0.27
ZEB2-220ENST00000476394 EIF4G3O43432 1585 aaKnown RBP16.69■□□□□ 0.26
ZEB2-220ENST00000476394 GAPVD1Q14C86 1478 aa16.67■□□□□ 0.26
ZEB2-220ENST00000476394 ZNF608Q9ULD9 1512 aaPredicted RBP16.65■□□□□ 0.26
ZEB2-220ENST00000476394 FAM9AQ8IZU1 332 aaPredicted RBP16.65■□□□□ 0.26
ZEB2-220ENST00000476394 CUL7Q14999 1698 aa16.64■□□□□ 0.25
ZEB2-220ENST00000476394 ERICH3Q5RHP9 1530 aa16.64■□□□□ 0.25
ZEB2-220ENST00000476394 TDRD9Q8NDG6 1382 aaKnown RBP16.64■□□□□ 0.25
ZEB2-220ENST00000476394 KIF21BO75037 1637 aa16.63■□□□□ 0.25
ZEB2-220ENST00000476394 CSRNP3Q8WYN3 585 aa16.61■□□□□ 0.25
ZEB2-220ENST00000476394 AQRO60306 1485 aaKnown RBP eCLIP16.61■□□□□ 0.25
ZEB2-220ENST00000476394 GRIN2BQ13224 1484 aa16.59■□□□□ 0.25
ZEB2-220ENST00000476394 IGF1RP08069 1367 aa16.58■□□□□ 0.24
ZEB2-220ENST00000476394 ADAMTS12P58397 1594 aa16.56■□□□□ 0.24
ZEB2-220ENST00000476394 PRXQ9BXM0 1461 aa16.56■□□□□ 0.24
ZEB2-220ENST00000476394 GOLGA3Q08378 1498 aa16.53■□□□□ 0.24
ZEB2-220ENST00000476394 SNAPC4Q5SXM2 1469 aa16.51■□□□□ 0.23
ZEB2-220ENST00000476394 MAGI1Q96QZ7 1491 aaPredicted RBP16.51■□□□□ 0.23
ZEB2-220ENST00000476394 CARMIL1Q5VZK9 1371 aa16.51■□□□□ 0.23
ZEB2-220ENST00000476394 RAPGEF2Q9Y4G8 1499 aa16.49■□□□□ 0.23
ZEB2-220ENST00000476394 FHAD1B1AJZ9 1412 aa16.48■□□□□ 0.23
ZEB2-220ENST00000476394 CTTNBP2Q8WZ74 1663 aa16.44■□□□□ 0.22
ZEB2-220ENST00000476394 SYNJ2O15056 1496 aa16.42■□□□□ 0.22
ZEB2-220ENST00000476394 CHD1O14646 1710 aa16.42■□□□□ 0.22
ZEB2-220ENST00000476394 LOC105371045A0A1W2PR82 267 aa16.42■□□□□ 0.22
ZEB2-220ENST00000476394 GRIN2AQ12879 1464 aa16.39■□□□□ 0.21
ZEB2-220ENST00000476394 EHMT2Q96KQ7 1210 aa16.38■□□□□ 0.21
ZEB2-220ENST00000476394 TNIKQ9UKE5 1360 aa16.38■□□□□ 0.21
ZEB2-220ENST00000476394 UBTFP17480 764 aaKnown RBP16.34■□□□□ 0.21
ZEB2-220ENST00000476394 CEP170Q5SW79 1584 aa16.32■□□□□ 0.2
ZEB2-220ENST00000476394 CHMP7Q8WUX9 453 aaPredicted RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms