RNA–Protein interactions for RNA: ENST00000476319.1

SLC5A6-215, Transcript of solute carrier family 5 member 6, humanhuman

TSL 3

Gene SLC5A6, Length 842 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC5A6-215ENST00000476319 NISCHQ9Y2I1 1504 aa35.73■■■■□ 3.31
SLC5A6-215ENST00000476319 CCDC180Q9P1Z9 1646 aa31.69■■■□□ 2.66
SLC5A6-215ENST00000476319 ABCC9O60706 1549 aa30.88■■■□□ 2.53
SLC5A6-215ENST00000476319 DCAF8L2P0C7V8 631 aa29.86■■■□□ 2.37
SLC5A6-215ENST00000476319 NACADO15069 1562 aa29.8■■■□□ 2.36
SLC5A6-215ENST00000476319 RB1CC1Q8TDY2 1594 aa29.8■■■□□ 2.36
SLC5A6-215ENST00000476319 ZCCHC6Q5VYS8 1495 aaKnown RBP29.8■■■□□ 2.36
SLC5A6-215ENST00000476319 MYO15BQ96JP2 1530 aa29.68■■■□□ 2.34
SLC5A6-215ENST00000476319 DCAF1Q9Y4B6 1507 aa29.6■■■□□ 2.33
SLC5A6-215ENST00000476319 UNC13AQ9UPW8 1703 aa28.99■■■□□ 2.23
SLC5A6-215ENST00000476319 SCRIBQ14160 1630 aa28.92■■■□□ 2.22
SLC5A6-215ENST00000476319 PABPN1Q86U42 306 aaKnown RBP eCLIP28.9■■■□□ 2.22
SLC5A6-215ENST00000476319 BICRAQ9NZM4 1560 aa28.83■■■□□ 2.21
SLC5A6-215ENST00000476319 SHROOM4Q9ULL8 1493 aa28.64■■■□□ 2.17
SLC5A6-215ENST00000476319 DNAJC5BQ9UF47 199 aa28.19■■■□□ 2.1
SLC5A6-215ENST00000476319 EIF4G1Q04637 1599 aaKnown RBP28.09■■■□□ 2.09
SLC5A6-215ENST00000476319 CC2D2AQ9P2K1 1620 aa27.92■■■□□ 2.06
SLC5A6-215ENST00000476319 CECR2Q9BXF3 1484 aa27.79■■■□□ 2.04
SLC5A6-215ENST00000476319 BAZ1AQ9NRL2 1556 aaPredicted RBP27.71■■■□□ 2.03
SLC5A6-215ENST00000476319 SMARCA4P51532 1647 aa27.68■■■□□ 2.02
SLC5A6-215ENST00000476319 SMARCA2P51531 1590 aa27.52■■■□□ 2
SLC5A6-215ENST00000476319 MROH2BQ7Z745 1585 aa27.52■■■□□ 2
SLC5A6-215ENST00000476319 ATAD2BQ9ULI0 1458 aa27.51■■■□□ 2
SLC5A6-215ENST00000476319 NCAPD3P42695 1498 aa27.5■■□□□ 1.99
SLC5A6-215ENST00000476319 PEG3Q9GZU2 1588 aa27.42■■□□□ 1.98
SLC5A6-215ENST00000476319 HMGXB3Q12766 1538 aa27.36■■□□□ 1.97
SLC5A6-215ENST00000476319 BAZ1BQ9UIG0 1483 aaKnown RBP27.32■■□□□ 1.96
SLC5A6-215ENST00000476319 RSF1Q96T23 1441 aaPredicted RBP27.29■■□□□ 1.96
SLC5A6-215ENST00000476319 WIZO95785 1651 aa27.21■■□□□ 1.95
SLC5A6-215ENST00000476319 TOP2AP11388 1531 aaKnown RBP26.97■■□□□ 1.91
SLC5A6-215ENST00000476319 NESP48681 1621 aa26.75■■□□□ 1.87
SLC5A6-215ENST00000476319 LAMC3Q9Y6N6 1575 aa26.75■■□□□ 1.87
SLC5A6-215ENST00000476319 SUPT5HO00267 1087 aaKnown RBP26.74■■□□□ 1.87
SLC5A6-215ENST00000476319 CADPSQ9ULU8 1353 aa26.72■■□□□ 1.87
SLC5A6-215ENST00000476319 ERCC6Q03468 1493 aa26.67■■□□□ 1.86
SLC5A6-215ENST00000476319 CCDC88BA6NC98 1476 aa26.65■■□□□ 1.86
SLC5A6-215ENST00000476319 PDS5BQ9NTI5 1447 aa26.61■■□□□ 1.85
SLC5A6-215ENST00000476319 CFTRP13569 1480 aa26.57■■□□□ 1.84
SLC5A6-215ENST00000476319 FANCD2Q9BXW9 1451 aa26.4■■□□□ 1.82
SLC5A6-215ENST00000476319 KIF21AQ7Z4S6 1674 aa26.4■■□□□ 1.82
SLC5A6-215ENST00000476319 CEP164Q9UPV0 1460 aa26.36■■□□□ 1.81
SLC5A6-215ENST00000476319 CUX2O14529 1486 aa26.32■■□□□ 1.8
SLC5A6-215ENST00000476319 THOC2Q8NI27 1593 aaKnown RBP26.3■■□□□ 1.8
SLC5A6-215ENST00000476319 PRDM2Q13029 1718 aa26.3■■□□□ 1.8
SLC5A6-215ENST00000476319 MRC2Q9UBG0 1479 aa26.29■■□□□ 1.8
SLC5A6-215ENST00000476319 WDR62O43379 1518 aa26.17■■□□□ 1.78
SLC5A6-215ENST00000476319 URB2Q14146 1524 aaKnown RBP26.09■■□□□ 1.77
SLC5A6-215ENST00000476319 ABCC8Q09428 1581 aa26.04■■□□□ 1.76
SLC5A6-215ENST00000476319 TOPBP1Q92547 1522 aa25.98■■□□□ 1.75
SLC5A6-215ENST00000476319 DNMBPQ6XZF7 1577 aa25.96■■□□□ 1.75
SLC5A6-215ENST00000476319 CUX1P39880 1505 aa25.82■■□□□ 1.72
SLC5A6-215ENST00000476319 IFT140Q96RY7 1462 aa25.81■■□□□ 1.72
SLC5A6-215ENST00000476319 POLA1P09884 1462 aaPredicted RBP25.76■■□□□ 1.71
SLC5A6-215ENST00000476319 WRNQ14191 1432 aaPredicted RBP eCLIP25.75■■□□□ 1.71
SLC5A6-215ENST00000476319 FGD5Q6ZNL6 1462 aa25.72■■□□□ 1.71
SLC5A6-215ENST00000476319 SOGA1O94964 1423 aa25.7■■□□□ 1.7
SLC5A6-215ENST00000476319 TARBP1Q13395 1621 aaKnown RBP25.65■■□□□ 1.7
SLC5A6-215ENST00000476319 TOP2BQ02880 1626 aa25.64■■□□□ 1.7
SLC5A6-215ENST00000476319 RAD54L2Q9Y4B4 1467 aa25.64■■□□□ 1.69
SLC5A6-215ENST00000476319 ZNF608Q9ULD9 1512 aaPredicted RBP25.63■■□□□ 1.69
SLC5A6-215ENST00000476319 BIVM-ERCC5R4GMW8 1640 aa25.62■■□□□ 1.69
SLC5A6-215ENST00000476319 SYNJ1O43426 1573 aa25.61■■□□□ 1.69
SLC5A6-215ENST00000476319 EIF4G3O43432 1585 aaKnown RBP25.53■■□□□ 1.68
SLC5A6-215ENST00000476319 AQRO60306 1485 aaKnown RBP eCLIP25.53■■□□□ 1.683e-7■■■■■ 36.6
SLC5A6-215ENST00000476319 TDRD9Q8NDG6 1382 aaKnown RBP25.52■■□□□ 1.68
SLC5A6-215ENST00000476319 WDR97A6NE52 1622 aa25.52■■□□□ 1.68
SLC5A6-215ENST00000476319 ABCA10Q8WWZ4 1543 aa25.49■■□□□ 1.67
SLC5A6-215ENST00000476319 GAPVD1Q14C86 1478 aa25.4■■□□□ 1.66
SLC5A6-215ENST00000476319 GRIN2BQ13224 1484 aa25.38■■□□□ 1.65
SLC5A6-215ENST00000476319 DNAJC5Q9H3Z4 198 aa25.35■■□□□ 1.65
SLC5A6-215ENST00000476319 ABCA5Q8WWZ7 1642 aa25.34■■□□□ 1.65
SLC5A6-215ENST00000476319 SNAPC4Q5SXM2 1469 aa25.3■■□□□ 1.64
SLC5A6-215ENST00000476319 MAGI1Q96QZ7 1491 aaPredicted RBP25.3■■□□□ 1.64
SLC5A6-215ENST00000476319 OSCARQ8IYS5 282 aa25.29■■□□□ 1.64
SLC5A6-215ENST00000476319 TRIM41Q8WV44 630 aa25.28■■□□□ 1.64
SLC5A6-215ENST00000476319 PBRM1Q86U86 1689 aa25.26■■□□□ 1.63
SLC5A6-215ENST00000476319 FBLN2P98095 1184 aa25.25■■□□□ 1.63
SLC5A6-215ENST00000476319 KIF27Q86VH2 1401 aa25.22■■□□□ 1.63
SLC5A6-215ENST00000476319 CHMP7Q8WUX9 453 aaPredicted RBP25.22■■□□□ 1.63
SLC5A6-215ENST00000476319 ERICH3Q5RHP9 1530 aa25.2■■□□□ 1.62
SLC5A6-215ENST00000476319 SYNJ2O15056 1496 aa25.2■■□□□ 1.62
SLC5A6-215ENST00000476319 CHD1O14646 1710 aa25.15■■□□□ 1.62
SLC5A6-215ENST00000476319 FHAD1B1AJZ9 1412 aa25.12■■□□□ 1.61
SLC5A6-215ENST00000476319 ADAMTS12P58397 1594 aa25.1■■□□□ 1.61
SLC5A6-215ENST00000476319 IGF1RP08069 1367 aa25.07■■□□□ 1.6
SLC5A6-215ENST00000476319 GRIN2AQ12879 1464 aa25.03■■□□□ 1.6
SLC5A6-215ENST00000476319 CHIC1Q5VXU3 224 aa25.02■■□□□ 1.6
SLC5A6-215ENST00000476319 CUL7Q14999 1698 aa24.98■■□□□ 1.59
SLC5A6-215ENST00000476319 RUSC2Q8N2Y8 1516 aa24.95■■□□□ 1.58
SLC5A6-215ENST00000476319 CARMIL1Q5VZK9 1371 aa24.94■■□□□ 1.58
SLC5A6-215ENST00000476319 CLASP1Q7Z460 1538 aa24.92■■□□□ 1.58
SLC5A6-215ENST00000476319 NUP160Q12769 1436 aa24.91■■□□□ 1.58
SLC5A6-215ENST00000476319 CEP170Q5SW79 1584 aa24.86■■□□□ 1.57
SLC5A6-215ENST00000476319 EEA1Q15075 1411 aa24.86■■□□□ 1.57
SLC5A6-215ENST00000476319 ARHGEF11O15085 1522 aa24.81■■□□□ 1.56
SLC5A6-215ENST00000476319 RAPGEF2Q9Y4G8 1499 aa24.81■■□□□ 1.56
SLC5A6-215ENST00000476319 CSRNP3Q8WYN3 585 aa24.79■■□□□ 1.56
SLC5A6-215ENST00000476319 RIMBP3CA6NJZ7 1639 aa24.77■■□□□ 1.56
SLC5A6-215ENST00000476319 RIMBP3BA6NNM3 1639 aa24.77■■□□□ 1.56
SLC5A6-215ENST00000476319 RIMBP3Q9UFD9 1639 aa24.77■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms