RNA–Protein interactions for RNA: ENST00000476117.1

SRPK2-209, Transcript of SRSF protein kinase 2, humanhuman

TSL 2

Gene SRPK2, Length 703 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK2-209ENST00000476117 NISCHQ9Y2I1 1504 aa22.52■■□□□ 1.2
SRPK2-209ENST00000476117 CCDC180Q9P1Z9 1646 aa20.28■□□□□ 0.84
SRPK2-209ENST00000476117 ABCC9O60706 1549 aa20.05■□□□□ 0.8
SRPK2-209ENST00000476117 RB1CC1Q8TDY2 1594 aa19.19■□□□□ 0.66
SRPK2-209ENST00000476117 NACADO15069 1562 aa19.08■□□□□ 0.65
SRPK2-209ENST00000476117 UNC13AQ9UPW8 1703 aa18.9■□□□□ 0.62
SRPK2-209ENST00000476117 MYO15BQ96JP2 1530 aa18.89■□□□□ 0.61
SRPK2-209ENST00000476117 DCAF8L2P0C7V8 631 aa18.75■□□□□ 0.59
SRPK2-209ENST00000476117 DNAJC5BQ9UF47 199 aa18.72■□□□□ 0.59
SRPK2-209ENST00000476117 ZCCHC6Q5VYS8 1495 aaKnown RBP18.71■□□□□ 0.59
SRPK2-209ENST00000476117 BICRAQ9NZM4 1560 aa18.68■□□□□ 0.58
SRPK2-209ENST00000476117 DCAF1Q9Y4B6 1507 aa18.67■□□□□ 0.58
SRPK2-209ENST00000476117 PABPN1Q86U42 306 aaKnown RBP eCLIP18.6■□□□□ 0.57
SRPK2-209ENST00000476117 SHROOM4Q9ULL8 1493 aa18.43■□□□□ 0.54
SRPK2-209ENST00000476117 SCRIBQ14160 1630 aa18.38■□□□□ 0.53
SRPK2-209ENST00000476117 CC2D2AQ9P2K1 1620 aa18.19■□□□□ 0.5
SRPK2-209ENST00000476117 EIF4G1Q04637 1599 aaKnown RBP18.17■□□□□ 0.5
SRPK2-209ENST00000476117 AEBP2Q6ZN18 517 aaPredicted RBP18.15■□□□□ 0.5
SRPK2-209ENST00000476117 CECR2Q9BXF3 1484 aa18.06■□□□□ 0.48
SRPK2-209ENST00000476117 SMARCA4P51532 1647 aa17.59■□□□□ 0.41
SRPK2-209ENST00000476117 NCAPD3P42695 1498 aa17.59■□□□□ 0.41
SRPK2-209ENST00000476117 ATAD2BQ9ULI0 1458 aa17.54■□□□□ 0.4
SRPK2-209ENST00000476117 SMARCA2P51531 1590 aa17.52■□□□□ 0.39
SRPK2-209ENST00000476117 HMGXB3Q12766 1538 aa17.52■□□□□ 0.39
SRPK2-209ENST00000476117 BAZ1AQ9NRL2 1556 aaPredicted RBP17.49■□□□□ 0.39
SRPK2-209ENST00000476117 PEG3Q9GZU2 1588 aa17.46■□□□□ 0.39
SRPK2-209ENST00000476117 MROH2BQ7Z745 1585 aa17.36■□□□□ 0.37
SRPK2-209ENST00000476117 BAZ1BQ9UIG0 1483 aaKnown RBP17.35■□□□□ 0.37
SRPK2-209ENST00000476117 CUX2O14529 1486 aa17.31■□□□□ 0.36
SRPK2-209ENST00000476117 ERCC6Q03468 1493 aa17.27■□□□□ 0.36
SRPK2-209ENST00000476117 NESP48681 1621 aa17.27■□□□□ 0.36
SRPK2-209ENST00000476117 LAMC3Q9Y6N6 1575 aa17.23■□□□□ 0.35
SRPK2-209ENST00000476117 WIZO95785 1651 aa17.18■□□□□ 0.34
SRPK2-209ENST00000476117 THOC2Q8NI27 1593 aaKnown RBP17.18■□□□□ 0.34
SRPK2-209ENST00000476117 KIF21AQ7Z4S6 1674 aa17.15■□□□□ 0.34
SRPK2-209ENST00000476117 DNAJC5Q9H3Z4 198 aa17.13■□□□□ 0.33
SRPK2-209ENST00000476117 CHIC1Q5VXU3 224 aa17.04■□□□□ 0.32
SRPK2-209ENST00000476117 PDS5BQ9NTI5 1447 aa17.03■□□□□ 0.32
SRPK2-209ENST00000476117 CADPSQ9ULU8 1353 aa17.02■□□□□ 0.31
SRPK2-209ENST00000476117 RSF1Q96T23 1441 aaPredicted RBP16.99■□□□□ 0.31
SRPK2-209ENST00000476117 TOP2AP11388 1531 aaKnown RBP16.96■□□□□ 0.3
SRPK2-209ENST00000476117 WDR62O43379 1518 aa16.92■□□□□ 0.3
SRPK2-209ENST00000476117 MRC2Q9UBG0 1479 aa16.92■□□□□ 0.3
SRPK2-209ENST00000476117 CFTRP13569 1480 aa16.88■□□□□ 0.29
SRPK2-209ENST00000476117 PRDM2Q13029 1718 aa16.88■□□□□ 0.29
SRPK2-209ENST00000476117 CEP164Q9UPV0 1460 aa16.86■□□□□ 0.29
SRPK2-209ENST00000476117 FANCD2Q9BXW9 1451 aa16.84■□□□□ 0.29
SRPK2-209ENST00000476117 URB2Q14146 1524 aaKnown RBP16.73■□□□□ 0.27
SRPK2-209ENST00000476117 CCDC88BA6NC98 1476 aa16.71■□□□□ 0.27
SRPK2-209ENST00000476117 TOPBP1Q92547 1522 aa16.55■□□□□ 0.24
SRPK2-209ENST00000476117 DNMBPQ6XZF7 1577 aa16.52■□□□□ 0.24
SRPK2-209ENST00000476117 IFT140Q96RY7 1462 aa16.52■□□□□ 0.23
SRPK2-209ENST00000476117 ABCC8Q09428 1581 aa16.51■□□□□ 0.23
SRPK2-209ENST00000476117 ZNF608Q9ULD9 1512 aaPredicted RBP16.48■□□□□ 0.23
SRPK2-209ENST00000476117 TARBP1Q13395 1621 aaKnown RBP16.46■□□□□ 0.23
SRPK2-209ENST00000476117 EIF4G3O43432 1585 aaKnown RBP16.46■□□□□ 0.23
SRPK2-209ENST00000476117 OSCARQ8IYS5 282 aa16.41■□□□□ 0.22
SRPK2-209ENST00000476117 POLA1P09884 1462 aaPredicted RBP16.39■□□□□ 0.21
SRPK2-209ENST00000476117 CHD1O14646 1710 aa16.36■□□□□ 0.21
SRPK2-209ENST00000476117 RIMBP3CA6NJZ7 1639 aa16.34■□□□□ 0.21
SRPK2-209ENST00000476117 RIMBP3BA6NNM3 1639 aa16.34■□□□□ 0.21
SRPK2-209ENST00000476117 RIMBP3Q9UFD9 1639 aa16.34■□□□□ 0.21
SRPK2-209ENST00000476117 TRIM41Q8WV44 630 aa16.32■□□□□ 0.2
SRPK2-209ENST00000476117 WDR97A6NE52 1622 aa16.31■□□□□ 0.2
SRPK2-209ENST00000476117 CUX1P39880 1505 aa16.3■□□□□ 0.2
SRPK2-209ENST00000476117 AQRO60306 1485 aaKnown RBP eCLIP16.3■□□□□ 0.23e-7■■■■■ 30.5
SRPK2-209ENST00000476117 FGD5Q6ZNL6 1462 aa16.29■□□□□ 0.2
SRPK2-209ENST00000476117 RAD54L2Q9Y4B4 1467 aa16.29■□□□□ 0.2
SRPK2-209ENST00000476117 ARHGEF11O15085 1522 aa16.25■□□□□ 0.19
SRPK2-209ENST00000476117 SOGA1O94964 1423 aa16.25■□□□□ 0.19
SRPK2-209ENST00000476117 PBRM1Q86U86 1689 aa16.19■□□□□ 0.18
SRPK2-209ENST00000476117 TDRD9Q8NDG6 1382 aaKnown RBP16.19■□□□□ 0.18
SRPK2-209ENST00000476117 SNAPC4Q5SXM2 1469 aa16.17■□□□□ 0.18
SRPK2-209ENST00000476117 MAGI1Q96QZ7 1491 aaPredicted RBP16.16■□□□□ 0.18
SRPK2-209ENST00000476117 ABCA5Q8WWZ7 1642 aa16.15■□□□□ 0.18
SRPK2-209ENST00000476117 CLASP1Q7Z460 1538 aa16.14■□□□□ 0.18
SRPK2-209ENST00000476117 SUPT5HO00267 1087 aaKnown RBP16.14■□□□□ 0.17
SRPK2-209ENST00000476117 GRIN2BQ13224 1484 aa16.14■□□□□ 0.17
SRPK2-209ENST00000476117 BIVM-ERCC5R4GMW8 1640 aa16.13■□□□□ 0.17
SRPK2-209ENST00000476117 ABCA10Q8WWZ4 1543 aa16.13■□□□□ 0.17
SRPK2-209ENST00000476117 ARAP1Q96P48 1450 aa16.1■□□□□ 0.17
SRPK2-209ENST00000476117 SYNJ1O43426 1573 aa16.1■□□□□ 0.17
SRPK2-209ENST00000476117 TOP2BQ02880 1626 aa16.09■□□□□ 0.17
SRPK2-209ENST00000476117 SYNJ2O15056 1496 aa16.09■□□□□ 0.17
SRPK2-209ENST00000476117 GAPVD1Q14C86 1478 aa16.09■□□□□ 0.17
SRPK2-209ENST00000476117 FBLN2P98095 1184 aa16.07■□□□□ 0.16
SRPK2-209ENST00000476117 CHMP7Q8WUX9 453 aaPredicted RBP16.01■□□□□ 0.15
SRPK2-209ENST00000476117 WRNQ14191 1432 aaPredicted RBP eCLIP16.01■□□□□ 0.15
SRPK2-209ENST00000476117 ADAMTS12P58397 1594 aa16■□□□□ 0.15
SRPK2-209ENST00000476117 CYB5RLQ6IPT4 315 aa16■□□□□ 0.15
SRPK2-209ENST00000476117 GRIN2AQ12879 1464 aa15.95■□□□□ 0.14
SRPK2-209ENST00000476117 ERICH3Q5RHP9 1530 aa15.94■□□□□ 0.14
SRPK2-209ENST00000476117 CEP170Q5SW79 1584 aa15.92■□□□□ 0.14
SRPK2-209ENST00000476117 NUP160Q12769 1436 aa15.91■□□□□ 0.14
SRPK2-209ENST00000476117 SHROOM2Q13796 1616 aa15.9■□□□□ 0.14
SRPK2-209ENST00000476117 FHAD1B1AJZ9 1412 aa15.88■□□□□ 0.13
SRPK2-209ENST00000476117 ERCC6L2Q5T890 1561 aa15.87■□□□□ 0.13
SRPK2-209ENST00000476117 RUSC2Q8N2Y8 1516 aa15.78■□□□□ 0.12
SRPK2-209ENST00000476117 TRHP20396 242 aaPredicted RBP15.76■□□□□ 0.11
SRPK2-209ENST00000476117 CUL7Q14999 1698 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms