RNA–Protein interactions for RNA: ENST00000475779.1

SMO-203, Transcript of smoothened, frizzled class receptor, humanhuman

TSL 3

Gene SMO, Length 582 nt, Biotype nonsense mediated decay.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMO-203ENST00000475779 NISCHQ9Y2I1 1504 aa30.04■■■□□ 2.4
SMO-203ENST00000475779 CCDC180Q9P1Z9 1646 aa27.02■■□□□ 1.92
SMO-203ENST00000475779 ABCC9O60706 1549 aa26.42■■□□□ 1.82
SMO-203ENST00000475779 RB1CC1Q8TDY2 1594 aa25.46■■□□□ 1.67
SMO-203ENST00000475779 NACADO15069 1562 aa25.35■■□□□ 1.65
SMO-203ENST00000475779 MYO15BQ96JP2 1530 aa25.17■■□□□ 1.62
SMO-203ENST00000475779 ZCCHC6Q5VYS8 1495 aaKnown RBP25.04■■□□□ 1.6
SMO-203ENST00000475779 DCAF1Q9Y4B6 1507 aa24.95■■□□□ 1.58
SMO-203ENST00000475779 UNC13AQ9UPW8 1703 aa24.92■■□□□ 1.58
SMO-203ENST00000475779 DCAF8L2P0C7V8 631 aa24.87■■□□□ 1.57
SMO-203ENST00000475779 BICRAQ9NZM4 1560 aa24.65■■□□□ 1.54
SMO-203ENST00000475779 SHROOM4Q9ULL8 1493 aa24.53■■□□□ 1.52
SMO-203ENST00000475779 PABPN1Q86U42 306 aaKnown RBP eCLIP24.48■■□□□ 1.51
SMO-203ENST00000475779 SCRIBQ14160 1630 aa24.47■■□□□ 1.51
SMO-203ENST00000475779 DNAJC5BQ9UF47 199 aa24.3■■□□□ 1.48
SMO-203ENST00000475779 EIF4G1Q04637 1599 aaKnown RBP24.03■■□□□ 1.44
SMO-203ENST00000475779 CC2D2AQ9P2K1 1620 aa23.99■■□□□ 1.43
SMO-203ENST00000475779 CECR2Q9BXF3 1484 aa23.81■■□□□ 1.4
SMO-203ENST00000475779 SMARCA4P51532 1647 aa23.44■■□□□ 1.34
SMO-203ENST00000475779 BAZ1AQ9NRL2 1556 aaPredicted RBP23.37■■□□□ 1.33
SMO-203ENST00000475779 SMARCA2P51531 1590 aa23.34■■□□□ 1.33
SMO-203ENST00000475779 NCAPD3P42695 1498 aa23.32■■□□□ 1.32
SMO-203ENST00000475779 HMGXB3Q12766 1538 aa23.31■■□□□ 1.32
SMO-203ENST00000475779 ATAD2BQ9ULI0 1458 aa23.28■■□□□ 1.32
SMO-203ENST00000475779 PEG3Q9GZU2 1588 aa23.26■■□□□ 1.31
SMO-203ENST00000475779 MROH2BQ7Z745 1585 aa23.11■■□□□ 1.29
SMO-203ENST00000475779 BAZ1BQ9UIG0 1483 aaKnown RBP23.11■■□□□ 1.29
SMO-203ENST00000475779 WIZO95785 1651 aa22.87■■□□□ 1.25
SMO-203ENST00000475779 LAMC3Q9Y6N6 1575 aa22.85■■□□□ 1.25
SMO-203ENST00000475779 ERCC6Q03468 1493 aa22.85■■□□□ 1.25
SMO-203ENST00000475779 CUX2O14529 1486 aa22.79■■□□□ 1.24
SMO-203ENST00000475779 NESP48681 1621 aa22.78■■□□□ 1.24
SMO-203ENST00000475779 RSF1Q96T23 1441 aaPredicted RBP22.71■■□□□ 1.23
SMO-203ENST00000475779 TOP2AP11388 1531 aaKnown RBP22.69■■□□□ 1.22
SMO-203ENST00000475779 THOC2Q8NI27 1593 aaKnown RBP22.68■■□□□ 1.22
SMO-203ENST00000475779 KIF21AQ7Z4S6 1674 aa22.65■■□□□ 1.22
SMO-203ENST00000475779 PDS5BQ9NTI5 1447 aa22.59■■□□□ 1.21
SMO-203ENST00000475779 CADPSQ9ULU8 1353 aa22.57■■□□□ 1.2
SMO-203ENST00000475779 PRDM2Q13029 1718 aa22.47■■□□□ 1.19
SMO-203ENST00000475779 CFTRP13569 1480 aa22.45■■□□□ 1.18
SMO-203ENST00000475779 MRC2Q9UBG0 1479 aa22.43■■□□□ 1.18
SMO-203ENST00000475779 WDR62O43379 1518 aa22.42■■□□□ 1.18
SMO-203ENST00000475779 CEP164Q9UPV0 1460 aa22.41■■□□□ 1.18
SMO-203ENST00000475779 FANCD2Q9BXW9 1451 aa22.37■■□□□ 1.17
SMO-203ENST00000475779 CCDC88BA6NC98 1476 aa22.28■■□□□ 1.16
SMO-203ENST00000475779 URB2Q14146 1524 aaKnown RBP22.16■■□□□ 1.14
SMO-203ENST00000475779 DNAJC5Q9H3Z4 198 aa22.16■■□□□ 1.14
SMO-203ENST00000475779 DNMBPQ6XZF7 1577 aa22.01■■□□□ 1.11
SMO-203ENST00000475779 ABCC8Q09428 1581 aa22■■□□□ 1.11
SMO-203ENST00000475779 TOPBP1Q92547 1522 aa22■■□□□ 1.11
SMO-203ENST00000475779 IFT140Q96RY7 1462 aa21.94■■□□□ 1.1
SMO-203ENST00000475779 EIF4G3O43432 1585 aaKnown RBP21.84■■□□□ 1.09
SMO-203ENST00000475779 TARBP1Q13395 1621 aaKnown RBP21.83■■□□□ 1.08
SMO-203ENST00000475779 POLA1P09884 1462 aaPredicted RBP21.79■■□□□ 1.08
SMO-203ENST00000475779 ZNF608Q9ULD9 1512 aaPredicted RBP21.78■■□□□ 1.08
SMO-203ENST00000475779 WDR97A6NE52 1622 aa21.77■■□□□ 1.07
SMO-203ENST00000475779 SUPT5HO00267 1087 aaKnown RBP21.73■■□□□ 1.07
SMO-203ENST00000475779 CUX1P39880 1505 aa21.72■■□□□ 1.07
SMO-203ENST00000475779 FGD5Q6ZNL6 1462 aa21.7■■□□□ 1.06
SMO-203ENST00000475779 CHD1O14646 1710 aa21.6■■□□□ 1.05
SMO-203ENST00000475779 RAD54L2Q9Y4B4 1467 aa21.6■■□□□ 1.05
SMO-203ENST00000475779 SOGA1O94964 1423 aa21.6■■□□□ 1.05
SMO-203ENST00000475779 BIVM-ERCC5R4GMW8 1640 aa21.58■■□□□ 1.04
SMO-203ENST00000475779 AQRO60306 1485 aaKnown RBP eCLIP21.58■■□□□ 1.042e-7■■■■□ 22.2
SMO-203ENST00000475779 OSCARQ8IYS5 282 aa21.56■■□□□ 1.04
SMO-203ENST00000475779 PBRM1Q86U86 1689 aa21.53■■□□□ 1.04
SMO-203ENST00000475779 TOP2BQ02880 1626 aa21.53■■□□□ 1.04
SMO-203ENST00000475779 ABCA5Q8WWZ7 1642 aa21.52■■□□□ 1.04
SMO-203ENST00000475779 ABCA10Q8WWZ4 1543 aa21.5■■□□□ 1.03
SMO-203ENST00000475779 MAGI1Q96QZ7 1491 aaPredicted RBP21.5■■□□□ 1.03
SMO-203ENST00000475779 SNAPC4Q5SXM2 1469 aa21.48■■□□□ 1.03
SMO-203ENST00000475779 SYNJ1O43426 1573 aa21.48■■□□□ 1.03
SMO-203ENST00000475779 GRIN2BQ13224 1484 aa21.47■■□□□ 1.03
SMO-203ENST00000475779 TDRD9Q8NDG6 1382 aaKnown RBP21.46■■□□□ 1.03
SMO-203ENST00000475779 WRNQ14191 1432 aaPredicted RBP eCLIP21.46■■□□□ 1.03
SMO-203ENST00000475779 RIMBP3CA6NJZ7 1639 aa21.45■■□□□ 1.02
SMO-203ENST00000475779 RIMBP3BA6NNM3 1639 aa21.45■■□□□ 1.02
SMO-203ENST00000475779 RIMBP3Q9UFD9 1639 aa21.45■■□□□ 1.02
SMO-203ENST00000475779 GAPVD1Q14C86 1478 aa21.41■■□□□ 1.02
SMO-203ENST00000475779 ARHGEF11O15085 1522 aa21.4■■□□□ 1.02
SMO-203ENST00000475779 SYNJ2O15056 1496 aa21.38■■□□□ 1.01
SMO-203ENST00000475779 CLASP1Q7Z460 1538 aa21.36■■□□□ 1.01
SMO-203ENST00000475779 ADAMTS12P58397 1594 aa21.33■■□□□ 1.01
SMO-203ENST00000475779 ERICH3Q5RHP9 1530 aa21.27■■□□□ 1
SMO-203ENST00000475779 FBLN2P98095 1184 aa21.26■□□□□ 0.99
SMO-203ENST00000475779 TRIM41Q8WV44 630 aa21.26■□□□□ 0.99
SMO-203ENST00000475779 GRIN2AQ12879 1464 aa21.22■□□□□ 0.99
SMO-203ENST00000475779 CHMP7Q8WUX9 453 aaPredicted RBP21.22■□□□□ 0.99
SMO-203ENST00000475779 ARAP1Q96P48 1450 aa21.2■□□□□ 0.98
SMO-203ENST00000475779 FHAD1B1AJZ9 1412 aa21.17■□□□□ 0.98
SMO-203ENST00000475779 CEP170Q5SW79 1584 aa21.14■□□□□ 0.98
SMO-203ENST00000475779 NUP160Q12769 1436 aa21.13■□□□□ 0.97
SMO-203ENST00000475779 CUL7Q14999 1698 aa21.09■□□□□ 0.97
SMO-203ENST00000475779 SHROOM2Q13796 1616 aa21.08■□□□□ 0.97
SMO-203ENST00000475779 RUSC2Q8N2Y8 1516 aa21.04■□□□□ 0.96
SMO-203ENST00000475779 KIF27Q86VH2 1401 aa21.04■□□□□ 0.96
SMO-203ENST00000475779 CYB5RLQ6IPT4 315 aa20.98■□□□□ 0.95
SMO-203ENST00000475779 ERCC6L2Q5T890 1561 aa20.94■□□□□ 0.94
SMO-203ENST00000475779 IGF1RP08069 1367 aa20.87■□□□□ 0.93
SMO-203ENST00000475779 KIAA0586Q9BVV6 1533 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms