RNA–Protein interactions for RNA: ENST00000475722.5

PRUNE1-210, Transcript of prune exopolyphosphatase 1, humanhuman

TSL 3

Gene PRUNE1, Length 916 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE1-210ENST00000475722 NISCHQ9Y2I1 1504 aa35.32■■■■□ 3.25
PRUNE1-210ENST00000475722 CCDC180Q9P1Z9 1646 aa31.1■■■□□ 2.57
PRUNE1-210ENST00000475722 ABCC9O60706 1549 aa29.94■■■□□ 2.38
PRUNE1-210ENST00000475722 ZCCHC6Q5VYS8 1495 aaKnown RBP29.54■■■□□ 2.32
PRUNE1-210ENST00000475722 DCAF8L2P0C7V8 631 aa29.32■■■□□ 2.28
PRUNE1-210ENST00000475722 DCAF1Q9Y4B6 1507 aa29.24■■■□□ 2.27
PRUNE1-210ENST00000475722 MYO15BQ96JP2 1530 aa29.14■■■□□ 2.25
PRUNE1-210ENST00000475722 NACADO15069 1562 aa29.13■■■□□ 2.25
PRUNE1-210ENST00000475722 RB1CC1Q8TDY2 1594 aa29.01■■■□□ 2.24
PRUNE1-210ENST00000475722 SCRIBQ14160 1630 aa28.47■■■□□ 2.15
PRUNE1-210ENST00000475722 UNC13AQ9UPW8 1703 aa28.35■■■□□ 2.13
PRUNE1-210ENST00000475722 SHROOM4Q9ULL8 1493 aa28.3■■■□□ 2.12
PRUNE1-210ENST00000475722 BICRAQ9NZM4 1560 aa28.14■■■□□ 2.1
PRUNE1-210ENST00000475722 PABPN1Q86U42 306 aaKnown RBP eCLIP28.1■■■□□ 2.09
PRUNE1-210ENST00000475722 CECR2Q9BXF3 1484 aa27.47■■□□□ 1.99
PRUNE1-210ENST00000475722 EIF4G1Q04637 1599 aaKnown RBP27.34■■□□□ 1.97
PRUNE1-210ENST00000475722 BAZ1AQ9NRL2 1556 aaPredicted RBP27.32■■□□□ 1.96
PRUNE1-210ENST00000475722 SMARCA4P51532 1647 aa27.27■■□□□ 1.96
PRUNE1-210ENST00000475722 MROH2BQ7Z745 1585 aa27.25■■□□□ 1.95
PRUNE1-210ENST00000475722 RSF1Q96T23 1441 aaPredicted RBP27.16■■□□□ 1.94
PRUNE1-210ENST00000475722 CC2D2AQ9P2K1 1620 aa27.08■■□□□ 1.93
PRUNE1-210ENST00000475722 ATAD2BQ9ULI0 1458 aa27■■□□□ 1.91
PRUNE1-210ENST00000475722 PEG3Q9GZU2 1588 aa26.99■■□□□ 1.91
PRUNE1-210ENST00000475722 DNAJC5BQ9UF47 199 aa26.98■■□□□ 1.91
PRUNE1-210ENST00000475722 WIZO95785 1651 aa26.97■■□□□ 1.91
PRUNE1-210ENST00000475722 SMARCA2P51531 1590 aa26.97■■□□□ 1.91
PRUNE1-210ENST00000475722 SUPT5HO00267 1087 aaKnown RBP26.92■■□□□ 1.9
PRUNE1-210ENST00000475722 NCAPD3P42695 1498 aa26.89■■□□□ 1.9
PRUNE1-210ENST00000475722 BAZ1BQ9UIG0 1483 aaKnown RBP26.8■■□□□ 1.88
PRUNE1-210ENST00000475722 HMGXB3Q12766 1538 aa26.79■■□□□ 1.88
PRUNE1-210ENST00000475722 TOP2AP11388 1531 aaKnown RBP26.7■■□□□ 1.87
PRUNE1-210ENST00000475722 CCDC88BA6NC98 1476 aa26.42■■□□□ 1.82
PRUNE1-210ENST00000475722 CADPSQ9ULU8 1353 aa26.15■■□□□ 1.78
PRUNE1-210ENST00000475722 CFTRP13569 1480 aa26.11■■□□□ 1.77
PRUNE1-210ENST00000475722 NESP48681 1621 aa26.08■■□□□ 1.77
PRUNE1-210ENST00000475722 LAMC3Q9Y6N6 1575 aa26.07■■□□□ 1.76
PRUNE1-210ENST00000475722 PRDM2Q13029 1718 aa25.9■■□□□ 1.74
PRUNE1-210ENST00000475722 PDS5BQ9NTI5 1447 aa25.89■■□□□ 1.74
PRUNE1-210ENST00000475722 FANCD2Q9BXW9 1451 aa25.84■■□□□ 1.73
PRUNE1-210ENST00000475722 KIF21AQ7Z4S6 1674 aa25.75■■□□□ 1.71
PRUNE1-210ENST00000475722 ERCC6Q03468 1493 aa25.74■■□□□ 1.71
PRUNE1-210ENST00000475722 CEP164Q9UPV0 1460 aa25.74■■□□□ 1.71
PRUNE1-210ENST00000475722 ABCC8Q09428 1581 aa25.62■■□□□ 1.69
PRUNE1-210ENST00000475722 MRC2Q9UBG0 1479 aa25.59■■□□□ 1.69
PRUNE1-210ENST00000475722 WRNQ14191 1432 aaPredicted RBP eCLIP25.57■■□□□ 1.68
PRUNE1-210ENST00000475722 URB2Q14146 1524 aaKnown RBP25.55■■□□□ 1.68
PRUNE1-210ENST00000475722 CUX1P39880 1505 aa25.53■■□□□ 1.68
PRUNE1-210ENST00000475722 THOC2Q8NI27 1593 aaKnown RBP25.52■■□□□ 1.68
PRUNE1-210ENST00000475722 DNMBPQ6XZF7 1577 aa25.5■■□□□ 1.67
PRUNE1-210ENST00000475722 TOPBP1Q92547 1522 aa25.49■■□□□ 1.67
PRUNE1-210ENST00000475722 CHIC1Q5VXU3 224 aa25.48■■□□□ 1.67
PRUNE1-210ENST00000475722 SYNJ1O43426 1573 aa25.48■■□□□ 1.67
PRUNE1-210ENST00000475722 WDR62O43379 1518 aa25.47■■□□□ 1.67
PRUNE1-210ENST00000475722 TOP2BQ02880 1626 aa25.44■■□□□ 1.66
PRUNE1-210ENST00000475722 BIVM-ERCC5R4GMW8 1640 aa25.42■■□□□ 1.66
PRUNE1-210ENST00000475722 TRIM41Q8WV44 630 aa25.4■■□□□ 1.66
PRUNE1-210ENST00000475722 FGD5Q6ZNL6 1462 aa25.34■■□□□ 1.65
PRUNE1-210ENST00000475722 POLA1P09884 1462 aaPredicted RBP25.31■■□□□ 1.64
PRUNE1-210ENST00000475722 CUX2O14529 1486 aa25.25■■□□□ 1.63
PRUNE1-210ENST00000475722 SOGA1O94964 1423 aa25.23■■□□□ 1.63
PRUNE1-210ENST00000475722 RAD54L2Q9Y4B4 1467 aa25.21■■□□□ 1.63
PRUNE1-210ENST00000475722 IFT140Q96RY7 1462 aa25.18■■□□□ 1.62
PRUNE1-210ENST00000475722 TARBP1Q13395 1621 aaKnown RBP25.16■■□□□ 1.62
PRUNE1-210ENST00000475722 ABCA10Q8WWZ4 1543 aa25.12■■□□□ 1.61
PRUNE1-210ENST00000475722 WDR97A6NE52 1622 aa25.07■■□□□ 1.6
PRUNE1-210ENST00000475722 ZNF608Q9ULD9 1512 aaPredicted RBP25.03■■□□□ 1.6
PRUNE1-210ENST00000475722 TDRD9Q8NDG6 1382 aaKnown RBP25.03■■□□□ 1.6
PRUNE1-210ENST00000475722 KIF27Q86VH2 1401 aa24.99■■□□□ 1.59
PRUNE1-210ENST00000475722 AQRO60306 1485 aaKnown RBP eCLIP24.98■■□□□ 1.59
PRUNE1-210ENST00000475722 RUSC2Q8N2Y8 1516 aa24.97■■□□□ 1.59
PRUNE1-210ENST00000475722 ABCA5Q8WWZ7 1642 aa24.95■■□□□ 1.58
PRUNE1-210ENST00000475722 GAPVD1Q14C86 1478 aa24.95■■□□□ 1.58
PRUNE1-210ENST00000475722 EIF4G3O43432 1585 aaKnown RBP24.93■■□□□ 1.58
PRUNE1-210ENST00000475722 EEA1Q15075 1411 aa24.89■■□□□ 1.58
PRUNE1-210ENST00000475722 FAM9AQ8IZU1 332 aaPredicted RBP24.87■■□□□ 1.57
PRUNE1-210ENST00000475722 GRIN2BQ13224 1484 aa24.85■■□□□ 1.57
PRUNE1-210ENST00000475722 IGF1RP08069 1367 aa24.84■■□□□ 1.57
PRUNE1-210ENST00000475722 PBRM1Q86U86 1689 aa24.82■■□□□ 1.56
PRUNE1-210ENST00000475722 ERICH3Q5RHP9 1530 aa24.81■■□□□ 1.56
PRUNE1-210ENST00000475722 CSRNP3Q8WYN3 585 aa24.81■■□□□ 1.56
PRUNE1-210ENST00000475722 SNAPC4Q5SXM2 1469 aa24.75■■□□□ 1.55
PRUNE1-210ENST00000475722 MAGI1Q96QZ7 1491 aaPredicted RBP24.71■■□□□ 1.55
PRUNE1-210ENST00000475722 CARMIL1Q5VZK9 1371 aa24.7■■□□□ 1.55
PRUNE1-210ENST00000475722 CUL7Q14999 1698 aa24.69■■□□□ 1.54
PRUNE1-210ENST00000475722 FHAD1B1AJZ9 1412 aa24.68■■□□□ 1.54
PRUNE1-210ENST00000475722 ADAMTS12P58397 1594 aa24.67■■□□□ 1.54
PRUNE1-210ENST00000475722 PRXQ9BXM0 1461 aa24.66■■□□□ 1.54
PRUNE1-210ENST00000475722 SYNJ2O15056 1496 aa24.62■■□□□ 1.53
PRUNE1-210ENST00000475722 RAPGEF2Q9Y4G8 1499 aa24.6■■□□□ 1.53
PRUNE1-210ENST00000475722 KIF21BO75037 1637 aa24.58■■□□□ 1.53
PRUNE1-210ENST00000475722 CHMP7Q8WUX9 453 aaPredicted RBP24.58■■□□□ 1.53
PRUNE1-210ENST00000475722 FBLN2P98095 1184 aa24.57■■□□□ 1.52
PRUNE1-210ENST00000475722 GRIN2AQ12879 1464 aa24.53■■□□□ 1.52
PRUNE1-210ENST00000475722 EHMT2Q96KQ7 1210 aa24.51■■□□□ 1.51
PRUNE1-210ENST00000475722 CHD1O14646 1710 aa24.5■■□□□ 1.51
PRUNE1-210ENST00000475722 GOLGA3Q08378 1498 aa24.5■■□□□ 1.51
PRUNE1-210ENST00000475722 LOC105371045A0A1W2PR82 267 aa24.45■■□□□ 1.5
PRUNE1-210ENST00000475722 UBTFP17480 764 aaKnown RBP24.41■■□□□ 1.5
PRUNE1-210ENST00000475722 NUP160Q12769 1436 aa24.41■■□□□ 1.5
PRUNE1-210ENST00000475722 CEP170Q5SW79 1584 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms