RNA–Protein interactions for RNA: ENST00000475621.1

FGFR1-219, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 2

Gene FGFR1, Length 485 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-219ENST00000475621 NISCHQ9Y2I1 1504 aa25.46■■□□□ 1.67
FGFR1-219ENST00000475621 ABCC9O60706 1549 aa23.81■■□□□ 1.4
FGFR1-219ENST00000475621 DNAJC5BQ9UF47 199 aa22.98■■□□□ 1.27
FGFR1-219ENST00000475621 CCDC180Q9P1Z9 1646 aa22.93■■□□□ 1.26
FGFR1-219ENST00000475621 RB1CC1Q8TDY2 1594 aa22.28■■□□□ 1.16
FGFR1-219ENST00000475621 PABPN1Q86U42 306 aaKnown RBP eCLIP22.2■■□□□ 1.14
FGFR1-219ENST00000475621 DCAF8L2P0C7V8 631 aa22.04■■□□□ 1.12
FGFR1-219ENST00000475621 NACADO15069 1562 aa21.97■■□□□ 1.11
FGFR1-219ENST00000475621 BICRAQ9NZM4 1560 aa21.6■■□□□ 1.05
FGFR1-219ENST00000475621 DNAJC5Q9H3Z4 198 aa21.58■■□□□ 1.05
FGFR1-219ENST00000475621 CECR2Q9BXF3 1484 aa21.52■■□□□ 1.04
FGFR1-219ENST00000475621 UNC13AQ9UPW8 1703 aa21.49■■□□□ 1.03
FGFR1-219ENST00000475621 MYO15BQ96JP2 1530 aa21.45■■□□□ 1.02
FGFR1-219ENST00000475621 CC2D2AQ9P2K1 1620 aa21.36■■□□□ 1.01
FGFR1-219ENST00000475621 SHROOM4Q9ULL8 1493 aa21.29■■□□□ 1
FGFR1-219ENST00000475621 EIF4G1Q04637 1599 aaKnown RBP21.17■□□□□ 0.98
FGFR1-219ENST00000475621 SCRIBQ14160 1630 aa20.99■□□□□ 0.95
FGFR1-219ENST00000475621 ZCCHC6Q5VYS8 1495 aaKnown RBP20.94■□□□□ 0.94
FGFR1-219ENST00000475621 DCAF1Q9Y4B6 1507 aa20.94■□□□□ 0.94
FGFR1-219ENST00000475621 CUX2O14529 1486 aa20.74■□□□□ 0.91
FGFR1-219ENST00000475621 ERCC6Q03468 1493 aa20.63■□□□□ 0.89
FGFR1-219ENST00000475621 TRIM41Q8WV44 630 aa20.43■□□□□ 0.86
FGFR1-219ENST00000475621 NCAPD3P42695 1498 aa20.37■□□□□ 0.85
FGFR1-219ENST00000475621 NESP48681 1621 aa20.24■□□□□ 0.83
FGFR1-219ENST00000475621 ATAD2BQ9ULI0 1458 aa20.22■□□□□ 0.83
FGFR1-219ENST00000475621 SMARCA2P51531 1590 aa20.07■□□□□ 0.8
FGFR1-219ENST00000475621 HMGXB3Q12766 1538 aa20.06■□□□□ 0.8
FGFR1-219ENST00000475621 THOC2Q8NI27 1593 aaKnown RBP20.02■□□□□ 0.8
FGFR1-219ENST00000475621 BAZ1BQ9UIG0 1483 aaKnown RBP19.99■□□□□ 0.79
FGFR1-219ENST00000475621 PDS5BQ9NTI5 1447 aa19.97■□□□□ 0.79
FGFR1-219ENST00000475621 LAMC3Q9Y6N6 1575 aa19.91■□□□□ 0.78
FGFR1-219ENST00000475621 SMARCA4P51532 1647 aa19.91■□□□□ 0.78
FGFR1-219ENST00000475621 OSCARQ8IYS5 282 aa19.85■□□□□ 0.77
FGFR1-219ENST00000475621 BAZ1AQ9NRL2 1556 aaPredicted RBP19.78■□□□□ 0.76
FGFR1-219ENST00000475621 CADPSQ9ULU8 1353 aa19.78■□□□□ 0.76
FGFR1-219ENST00000475621 MRC2Q9UBG0 1479 aa19.77■□□□□ 0.76
FGFR1-219ENST00000475621 KIF21AQ7Z4S6 1674 aa19.75■□□□□ 0.75
FGFR1-219ENST00000475621 PEG3Q9GZU2 1588 aa19.71■□□□□ 0.75
FGFR1-219ENST00000475621 WDR62O43379 1518 aa19.67■□□□□ 0.74
FGFR1-219ENST00000475621 MROH2BQ7Z745 1585 aa19.61■□□□□ 0.73
FGFR1-219ENST00000475621 CEP164Q9UPV0 1460 aa19.57■□□□□ 0.72
FGFR1-219ENST00000475621 FANCD2Q9BXW9 1451 aa19.51■□□□□ 0.71
FGFR1-219ENST00000475621 TRHP20396 242 aaPredicted RBP19.46■□□□□ 0.71
FGFR1-219ENST00000475621 CYB5RLQ6IPT4 315 aa19.45■□□□□ 0.7
FGFR1-219ENST00000475621 RIMBP3CA6NJZ7 1639 aa19.42■□□□□ 0.7
FGFR1-219ENST00000475621 RIMBP3BA6NNM3 1639 aa19.42■□□□□ 0.7
FGFR1-219ENST00000475621 RIMBP3Q9UFD9 1639 aa19.42■□□□□ 0.7
FGFR1-219ENST00000475621 AEBP2Q6ZN18 517 aaPredicted RBP19.38■□□□□ 0.69
FGFR1-219ENST00000475621 ARHGEF11O15085 1522 aa19.36■□□□□ 0.69
FGFR1-219ENST00000475621 CFTRP13569 1480 aa19.36■□□□□ 0.69
FGFR1-219ENST00000475621 URB2Q14146 1524 aaKnown RBP19.35■□□□□ 0.69
FGFR1-219ENST00000475621 WIZO95785 1651 aa19.26■□□□□ 0.67
FGFR1-219ENST00000475621 ZNF608Q9ULD9 1512 aaPredicted RBP19.25■□□□□ 0.67
FGFR1-219ENST00000475621 IFT140Q96RY7 1462 aa19.22■□□□□ 0.67
FGFR1-219ENST00000475621 FBLN2P98095 1184 aa19.18■□□□□ 0.66
FGFR1-219ENST00000475621 ARAP1Q96P48 1450 aa19.14■□□□□ 0.65
FGFR1-219ENST00000475621 RSF1Q96T23 1441 aaPredicted RBP19.07■□□□□ 0.64
FGFR1-219ENST00000475621 AQRO60306 1485 aaKnown RBP eCLIP19.04■□□□□ 0.64
FGFR1-219ENST00000475621 TOPBP1Q92547 1522 aa19.03■□□□□ 0.64
FGFR1-219ENST00000475621 TOP2AP11388 1531 aaKnown RBP19.02■□□□□ 0.64
FGFR1-219ENST00000475621 EIF4G3O43432 1585 aaKnown RBP18.98■□□□□ 0.63
FGFR1-219ENST00000475621 ABCC8Q09428 1581 aa18.97■□□□□ 0.63
FGFR1-219ENST00000475621 CHMP7Q8WUX9 453 aaPredicted RBP18.9■□□□□ 0.62
FGFR1-219ENST00000475621 CCDC88BA6NC98 1476 aa18.9■□□□□ 0.62
FGFR1-219ENST00000475621 TDRD9Q8NDG6 1382 aaKnown RBP18.87■□□□□ 0.61
FGFR1-219ENST00000475621 CHD1O14646 1710 aa18.86■□□□□ 0.61
FGFR1-219ENST00000475621 DNMBPQ6XZF7 1577 aa18.85■□□□□ 0.61
FGFR1-219ENST00000475621 TARBP1Q13395 1621 aaKnown RBP18.82■□□□□ 0.6
FGFR1-219ENST00000475621 POLA1P09884 1462 aaPredicted RBP18.81■□□□□ 0.6
FGFR1-219ENST00000475621 RAD54L2Q9Y4B4 1467 aa18.79■□□□□ 0.6
FGFR1-219ENST00000475621 SOGA1O94964 1423 aa18.79■□□□□ 0.6
FGFR1-219ENST00000475621 SNAPC4Q5SXM2 1469 aa18.77■□□□□ 0.6
FGFR1-219ENST00000475621 CLASP1Q7Z460 1538 aa18.76■□□□□ 0.59
FGFR1-219ENST00000475621 PRDM2Q13029 1718 aa18.75■□□□□ 0.59
FGFR1-219ENST00000475621 SYNJ1O43426 1573 aa18.72■□□□□ 0.59
FGFR1-219ENST00000475621 GAPVD1Q14C86 1478 aa18.72■□□□□ 0.59
FGFR1-219ENST00000475621 MAGI1Q96QZ7 1491 aaPredicted RBP18.69■□□□□ 0.58
FGFR1-219ENST00000475621 GRIN2BQ13224 1484 aa18.65■□□□□ 0.58
FGFR1-219ENST00000475621 SYNJ2O15056 1496 aa18.65■□□□□ 0.58
FGFR1-219ENST00000475621 FGD5Q6ZNL6 1462 aa18.6■□□□□ 0.57
FGFR1-219ENST00000475621 ILDR1Q86SU0 546 aaPredicted RBP18.56■□□□□ 0.56
FGFR1-219ENST00000475621 WDR97A6NE52 1622 aa18.56■□□□□ 0.56
FGFR1-219ENST00000475621 CUX1P39880 1505 aa18.45■□□□□ 0.54
FGFR1-219ENST00000475621 ERCC6L2Q5T890 1561 aa18.45■□□□□ 0.54
FGFR1-219ENST00000475621 FAM69CQ0P6D2 419 aa18.44■□□□□ 0.54
FGFR1-219ENST00000475621 KDM4FA0A1W2PPD8 638 aa18.43■□□□□ 0.54
FGFR1-219ENST00000475621 GRIN2AQ12879 1464 aa18.39■□□□□ 0.53
FGFR1-219ENST00000475621 NPM1P06748 294 aaKnown RBP eCLIP18.37■□□□□ 0.53
FGFR1-219ENST00000475621 CEP170Q5SW79 1584 aa18.36■□□□□ 0.53
FGFR1-219ENST00000475621 NUP160Q12769 1436 aa18.35■□□□□ 0.53
FGFR1-219ENST00000475621 ABCA10Q8WWZ4 1543 aa18.34■□□□□ 0.53
FGFR1-219ENST00000475621 PRG4Q92954 1404 aaPredicted RBP18.31■□□□□ 0.52
FGFR1-219ENST00000475621 ABCC10Q5T3U5 1492 aa18.3■□□□□ 0.52
FGFR1-219ENST00000475621 PBRM1Q86U86 1689 aa18.29■□□□□ 0.52
FGFR1-219ENST00000475621 JPH4Q96JJ6 628 aa18.29■□□□□ 0.52
FGFR1-219ENST00000475621 FHAD1B1AJZ9 1412 aa18.27■□□□□ 0.52
FGFR1-219ENST00000475621 ABCA5Q8WWZ7 1642 aa18.27■□□□□ 0.51
FGFR1-219ENST00000475621 WRNQ14191 1432 aaPredicted RBP eCLIP18.23■□□□□ 0.51
FGFR1-219ENST00000475621 KIF13AQ9H1H9 1805 aa18.21■□□□□ 0.51
FGFR1-219ENST00000475621 SHROOM2Q13796 1616 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms