RNA–Protein interactions for RNA: ENST00000475364.1

CMTR1-205, Transcript of cap methyltransferase 1, humanhuman

TSL 5

Gene CMTR1, Length 1,032 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTR1-205ENST00000475364 NISCHQ9Y2I1 1504 aa45.95■■■■■ 4.95
CMTR1-205ENST00000475364 CCDC180Q9P1Z9 1646 aa41.22■■■■■ 4.19
CMTR1-205ENST00000475364 ABCC9O60706 1549 aa40.7■■■■■ 4.11
CMTR1-205ENST00000475364 RB1CC1Q8TDY2 1594 aa38.98■■■■□ 3.83
CMTR1-205ENST00000475364 NACADO15069 1562 aa38.78■■■■□ 3.8
CMTR1-205ENST00000475364 DCAF8L2P0C7V8 631 aa38.45■■■■□ 3.75
CMTR1-205ENST00000475364 MYO15BQ96JP2 1530 aa38.38■■■■□ 3.73
CMTR1-205ENST00000475364 ZCCHC6Q5VYS8 1495 aaKnown RBP38.21■■■■□ 3.71
CMTR1-205ENST00000475364 UNC13AQ9UPW8 1703 aa38.21■■■■□ 3.71
CMTR1-205ENST00000475364 DCAF1Q9Y4B6 1507 aa38.02■■■■□ 3.68
CMTR1-205ENST00000475364 PABPN1Q86U42 306 aaKnown RBP eCLIP37.84■■■■□ 3.65
CMTR1-205ENST00000475364 BICRAQ9NZM4 1560 aa37.81■■■■□ 3.64
CMTR1-205ENST00000475364 DNAJC5BQ9UF47 199 aa37.71■■■■□ 3.63
CMTR1-205ENST00000475364 SCRIBQ14160 1630 aa37.51■■■■□ 3.6
CMTR1-205ENST00000475364 SHROOM4Q9ULL8 1493 aa37.39■■■■□ 3.58
CMTR1-205ENST00000475364 EIF4G1Q04637 1599 aaKnown RBP36.86■■■■□ 3.49
CMTR1-205ENST00000475364 CC2D2AQ9P2K1 1620 aa36.85■■■■□ 3.49
CMTR1-205ENST00000475364 CECR2Q9BXF3 1484 aa36.62■■■■□ 3.45
CMTR1-205ENST00000475364 SMARCA4P51532 1647 aa35.83■■■■□ 3.33
CMTR1-205ENST00000475364 NCAPD3P42695 1498 aa35.73■■■■□ 3.31
CMTR1-205ENST00000475364 BAZ1AQ9NRL2 1556 aaPredicted RBP35.69■■■■□ 3.3
CMTR1-205ENST00000475364 ATAD2BQ9ULI0 1458 aa35.69■■■■□ 3.3
CMTR1-205ENST00000475364 SMARCA2P51531 1590 aa35.68■■■■□ 3.3
CMTR1-205ENST00000475364 HMGXB3Q12766 1538 aa35.61■■■■□ 3.29
CMTR1-205ENST00000475364 PEG3Q9GZU2 1588 aa35.48■■■■□ 3.27
CMTR1-205ENST00000475364 MROH2BQ7Z745 1585 aa35.41■■■■□ 3.26
CMTR1-205ENST00000475364 BAZ1BQ9UIG0 1483 aaKnown RBP35.4■■■■□ 3.26
CMTR1-205ENST00000475364 ERCC6Q03468 1493 aa35.13■■■■□ 3.21
CMTR1-205ENST00000475364 NESP48681 1621 aa35.06■■■■□ 3.2
CMTR1-205ENST00000475364 WIZO95785 1651 aa35.05■■■■□ 3.2
CMTR1-205ENST00000475364 CUX2O14529 1486 aa34.97■■■■□ 3.19
CMTR1-205ENST00000475364 LAMC3Q9Y6N6 1575 aa34.96■■■■□ 3.19
CMTR1-205ENST00000475364 RSF1Q96T23 1441 aaPredicted RBP34.76■■■■□ 3.16
CMTR1-205ENST00000475364 KIF21AQ7Z4S6 1674 aa34.76■■■■□ 3.15
CMTR1-205ENST00000475364 THOC2Q8NI27 1593 aaKnown RBP34.75■■■■□ 3.15
CMTR1-205ENST00000475364 PDS5BQ9NTI5 1447 aa34.65■■■■□ 3.14
CMTR1-205ENST00000475364 TOP2AP11388 1531 aaKnown RBP34.65■■■■□ 3.14
CMTR1-205ENST00000475364 CADPSQ9ULU8 1353 aa34.64■■■■□ 3.14
CMTR1-205ENST00000475364 MRC2Q9UBG0 1479 aa34.39■■■■□ 3.1
CMTR1-205ENST00000475364 DNAJC5Q9H3Z4 198 aa34.38■■■■□ 3.09
CMTR1-205ENST00000475364 CFTRP13569 1480 aa34.36■■■■□ 3.09
CMTR1-205ENST00000475364 CEP164Q9UPV0 1460 aa34.33■■■■□ 3.09
CMTR1-205ENST00000475364 WDR62O43379 1518 aa34.33■■■■□ 3.09
CMTR1-205ENST00000475364 FANCD2Q9BXW9 1451 aa34.3■■■■□ 3.08
CMTR1-205ENST00000475364 PRDM2Q13029 1718 aa34.27■■■■□ 3.08
CMTR1-205ENST00000475364 CCDC88BA6NC98 1476 aa34.16■■■■□ 3.06
CMTR1-205ENST00000475364 URB2Q14146 1524 aaKnown RBP34■■■■□ 3.03
CMTR1-205ENST00000475364 TOPBP1Q92547 1522 aa33.71■■■□□ 2.99
CMTR1-205ENST00000475364 DNMBPQ6XZF7 1577 aa33.66■■■□□ 2.98
CMTR1-205ENST00000475364 ABCC8Q09428 1581 aa33.65■■■□□ 2.98
CMTR1-205ENST00000475364 IFT140Q96RY7 1462 aa33.61■■■□□ 2.97
CMTR1-205ENST00000475364 ZNF608Q9ULD9 1512 aaPredicted RBP33.49■■■□□ 2.95
CMTR1-205ENST00000475364 EIF4G3O43432 1585 aaKnown RBP33.44■■■□□ 2.94
CMTR1-205ENST00000475364 TARBP1Q13395 1621 aaKnown RBP33.42■■■□□ 2.94
CMTR1-205ENST00000475364 SUPT5HO00267 1087 aaKnown RBP33.41■■■□□ 2.94
CMTR1-205ENST00000475364 POLA1P09884 1462 aaPredicted RBP33.38■■■□□ 2.93
CMTR1-205ENST00000475364 OSCARQ8IYS5 282 aa33.29■■■□□ 2.92
CMTR1-205ENST00000475364 CUX1P39880 1505 aa33.27■■■□□ 2.92
CMTR1-205ENST00000475364 FGD5Q6ZNL6 1462 aa33.24■■■□□ 2.91
CMTR1-205ENST00000475364 RAD54L2Q9Y4B4 1467 aa33.21■■■□□ 2.91
CMTR1-205ENST00000475364 AQRO60306 1485 aaKnown RBP eCLIP33.2■■■□□ 2.915e-7■■■□□ 16.8
CMTR1-205ENST00000475364 SOGA1O94964 1423 aa33.17■■■□□ 2.9
CMTR1-205ENST00000475364 CHD1O14646 1710 aa33.16■■■□□ 2.9
CMTR1-205ENST00000475364 WDR97A6NE52 1622 aa33.15■■■□□ 2.9
CMTR1-205ENST00000475364 TRIM41Q8WV44 630 aa33.04■■■□□ 2.88
CMTR1-205ENST00000475364 TDRD9Q8NDG6 1382 aaKnown RBP33.04■■■□□ 2.88
CMTR1-205ENST00000475364 RIMBP3CA6NJZ7 1639 aa32.99■■■□□ 2.87
CMTR1-205ENST00000475364 RIMBP3BA6NNM3 1639 aa32.99■■■□□ 2.87
CMTR1-205ENST00000475364 RIMBP3Q9UFD9 1639 aa32.99■■■□□ 2.87
CMTR1-205ENST00000475364 SNAPC4Q5SXM2 1469 aa32.95■■■□□ 2.87
CMTR1-205ENST00000475364 PBRM1Q86U86 1689 aa32.93■■■□□ 2.86
CMTR1-205ENST00000475364 BIVM-ERCC5R4GMW8 1640 aa32.91■■■□□ 2.86
CMTR1-205ENST00000475364 ARHGEF11O15085 1522 aa32.9■■■□□ 2.86
CMTR1-205ENST00000475364 GRIN2BQ13224 1484 aa32.89■■■□□ 2.86
CMTR1-205ENST00000475364 MAGI1Q96QZ7 1491 aaPredicted RBP32.89■■■□□ 2.86
CMTR1-205ENST00000475364 ABCA5Q8WWZ7 1642 aa32.88■■■□□ 2.85
CMTR1-205ENST00000475364 ABCA10Q8WWZ4 1543 aa32.87■■■□□ 2.85
CMTR1-205ENST00000475364 TOP2BQ02880 1626 aa32.87■■■□□ 2.85
CMTR1-205ENST00000475364 FBLN2P98095 1184 aa32.86■■■□□ 2.85
CMTR1-205ENST00000475364 SYNJ1O43426 1573 aa32.83■■■□□ 2.85
CMTR1-205ENST00000475364 GAPVD1Q14C86 1478 aa32.82■■■□□ 2.84
CMTR1-205ENST00000475364 WRNQ14191 1432 aaPredicted RBP eCLIP32.82■■■□□ 2.84
CMTR1-205ENST00000475364 SYNJ2O15056 1496 aa32.75■■■□□ 2.83
CMTR1-205ENST00000475364 CLASP1Q7Z460 1538 aa32.72■■■□□ 2.83
CMTR1-205ENST00000475364 CHMP7Q8WUX9 453 aaPredicted RBP32.68■■■□□ 2.82
CMTR1-205ENST00000475364 ADAMTS12P58397 1594 aa32.6■■■□□ 2.81
CMTR1-205ENST00000475364 ARAP1Q96P48 1450 aa32.59■■■□□ 2.81
CMTR1-205ENST00000475364 GRIN2AQ12879 1464 aa32.5■■■□□ 2.79
CMTR1-205ENST00000475364 ERICH3Q5RHP9 1530 aa32.49■■■□□ 2.79
CMTR1-205ENST00000475364 CYB5RLQ6IPT4 315 aa32.48■■■□□ 2.79
CMTR1-205ENST00000475364 FHAD1B1AJZ9 1412 aa32.42■■■□□ 2.78
CMTR1-205ENST00000475364 CEP170Q5SW79 1584 aa32.39■■■□□ 2.78
CMTR1-205ENST00000475364 NUP160Q12769 1436 aa32.35■■■□□ 2.77
CMTR1-205ENST00000475364 SHROOM2Q13796 1616 aa32.25■■■□□ 2.75
CMTR1-205ENST00000475364 ERCC6L2Q5T890 1561 aa32.2■■■□□ 2.75
CMTR1-205ENST00000475364 KIF27Q86VH2 1401 aa32.17■■■□□ 2.74
CMTR1-205ENST00000475364 CUL7Q14999 1698 aa32.15■■■□□ 2.74
CMTR1-205ENST00000475364 RUSC2Q8N2Y8 1516 aa32.14■■■□□ 2.74
CMTR1-205ENST00000475364 IGF1RP08069 1367 aa32.04■■■□□ 2.72
CMTR1-205ENST00000475364 TRHP20396 242 aaPredicted RBP32.01■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms