RNA–Protein interactions for RNA: ENST00000475351.5

RIOK1-203, Transcript of RIO kinase 1, humanhuman

TSL 1 (best)

Gene RIOK1, Length 960 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK1-203ENST00000475351 NISCHQ9Y2I1 1504 aa45.05■■■■■ 4.8
RIOK1-203ENST00000475351 ABCC9O60706 1549 aa40.91■■■■■ 4.14
RIOK1-203ENST00000475351 CCDC180Q9P1Z9 1646 aa40.73■■■■■ 4.11
RIOK1-203ENST00000475351 RB1CC1Q8TDY2 1594 aa38.85■■■■□ 3.81
RIOK1-203ENST00000475351 DNAJC5BQ9UF47 199 aa38.68■■■■□ 3.78
RIOK1-203ENST00000475351 NACADO15069 1562 aa38.49■■■■□ 3.75
RIOK1-203ENST00000475351 UNC13AQ9UPW8 1703 aa38.17■■■■□ 3.7
RIOK1-203ENST00000475351 DCAF8L2P0C7V8 631 aa37.94■■■■□ 3.66
RIOK1-203ENST00000475351 PABPN1Q86U42 306 aaKnown RBP eCLIP37.93■■■■□ 3.66
RIOK1-203ENST00000475351 MYO15BQ96JP2 1530 aa37.86■■■■□ 3.65
RIOK1-203ENST00000475351 BICRAQ9NZM4 1560 aa37.8■■■■□ 3.64
RIOK1-203ENST00000475351 ZCCHC6Q5VYS8 1495 aaKnown RBP37.29■■■■□ 3.56
RIOK1-203ENST00000475351 DCAF1Q9Y4B6 1507 aa37.24■■■■□ 3.55
RIOK1-203ENST00000475351 SHROOM4Q9ULL8 1493 aa37.22■■■■□ 3.55
RIOK1-203ENST00000475351 CC2D2AQ9P2K1 1620 aa37.03■■■■□ 3.52
RIOK1-203ENST00000475351 SCRIBQ14160 1630 aa36.99■■■■□ 3.51
RIOK1-203ENST00000475351 CECR2Q9BXF3 1484 aa36.9■■■■□ 3.5
RIOK1-203ENST00000475351 EIF4G1Q04637 1599 aaKnown RBP36.85■■■■□ 3.49
RIOK1-203ENST00000475351 DNAJC5Q9H3Z4 198 aa35.78■■■■□ 3.32
RIOK1-203ENST00000475351 NCAPD3P42695 1498 aa35.49■■■■□ 3.27
RIOK1-203ENST00000475351 CUX2O14529 1486 aa35.48■■■■□ 3.27
RIOK1-203ENST00000475351 ATAD2BQ9ULI0 1458 aa35.34■■■■□ 3.25
RIOK1-203ENST00000475351 ERCC6Q03468 1493 aa35.33■■■■□ 3.25
RIOK1-203ENST00000475351 SMARCA4P51532 1647 aa35.28■■■■□ 3.24
RIOK1-203ENST00000475351 HMGXB3Q12766 1538 aa35.27■■■■□ 3.24
RIOK1-203ENST00000475351 SMARCA2P51531 1590 aa35.25■■■■□ 3.23
RIOK1-203ENST00000475351 NESP48681 1621 aa35.07■■■■□ 3.21
RIOK1-203ENST00000475351 BAZ1AQ9NRL2 1556 aaPredicted RBP35■■■■□ 3.19
RIOK1-203ENST00000475351 BAZ1BQ9UIG0 1483 aaKnown RBP34.97■■■■□ 3.19
RIOK1-203ENST00000475351 PEG3Q9GZU2 1588 aa34.96■■■■□ 3.19
RIOK1-203ENST00000475351 THOC2Q8NI27 1593 aaKnown RBP34.91■■■■□ 3.18
RIOK1-203ENST00000475351 LAMC3Q9Y6N6 1575 aa34.82■■■■□ 3.16
RIOK1-203ENST00000475351 KIF21AQ7Z4S6 1674 aa34.74■■■■□ 3.15
RIOK1-203ENST00000475351 MROH2BQ7Z745 1585 aa34.71■■■■□ 3.15
RIOK1-203ENST00000475351 PDS5BQ9NTI5 1447 aa34.52■■■■□ 3.12
RIOK1-203ENST00000475351 CADPSQ9ULU8 1353 aa34.36■■■■□ 3.09
RIOK1-203ENST00000475351 WIZO95785 1651 aa34.32■■■■□ 3.08
RIOK1-203ENST00000475351 MRC2Q9UBG0 1479 aa34.31■■■■□ 3.08
RIOK1-203ENST00000475351 WDR62O43379 1518 aa34.29■■■■□ 3.08
RIOK1-203ENST00000475351 CEP164Q9UPV0 1460 aa34.08■■■■□ 3.05
RIOK1-203ENST00000475351 FANCD2Q9BXW9 1451 aa34■■■■□ 3.03
RIOK1-203ENST00000475351 TRIM41Q8WV44 630 aa33.99■■■■□ 3.03
RIOK1-203ENST00000475351 CFTRP13569 1480 aa33.93■■■■□ 3.02
RIOK1-203ENST00000475351 TOP2AP11388 1531 aaKnown RBP33.84■■■■□ 3.01
RIOK1-203ENST00000475351 RSF1Q96T23 1441 aaPredicted RBP33.8■■■■□ 3
RIOK1-203ENST00000475351 PRDM2Q13029 1718 aa33.8■■■■□ 3
RIOK1-203ENST00000475351 URB2Q14146 1524 aaKnown RBP33.79■■■■□ 3
RIOK1-203ENST00000475351 OSCARQ8IYS5 282 aa33.64■■■□□ 2.98
RIOK1-203ENST00000475351 RIMBP3CA6NJZ7 1639 aa33.45■■■□□ 2.95
RIOK1-203ENST00000475351 RIMBP3BA6NNM3 1639 aa33.45■■■□□ 2.95
RIOK1-203ENST00000475351 RIMBP3Q9UFD9 1639 aa33.45■■■□□ 2.95
RIOK1-203ENST00000475351 IFT140Q96RY7 1462 aa33.41■■■□□ 2.94
RIOK1-203ENST00000475351 ZNF608Q9ULD9 1512 aaPredicted RBP33.4■■■□□ 2.94
RIOK1-203ENST00000475351 CCDC88BA6NC98 1476 aa33.39■■■□□ 2.94
RIOK1-203ENST00000475351 TOPBP1Q92547 1522 aa33.34■■■□□ 2.93
RIOK1-203ENST00000475351 EIF4G3O43432 1585 aaKnown RBP33.29■■■□□ 2.92
RIOK1-203ENST00000475351 ARHGEF11O15085 1522 aa33.25■■■□□ 2.91
RIOK1-203ENST00000475351 DNMBPQ6XZF7 1577 aa33.22■■■□□ 2.91
RIOK1-203ENST00000475351 ABCC8Q09428 1581 aa33.21■■■□□ 2.91
RIOK1-203ENST00000475351 CHD1O14646 1710 aa33.17■■■□□ 2.9
RIOK1-203ENST00000475351 TARBP1Q13395 1621 aaKnown RBP33.15■■■□□ 2.9
RIOK1-203ENST00000475351 AQRO60306 1485 aaKnown RBP eCLIP33.01■■■□□ 2.884e-6■■■■■ 31
RIOK1-203ENST00000475351 POLA1P09884 1462 aaPredicted RBP32.98■■■□□ 2.87
RIOK1-203ENST00000475351 ARAP1Q96P48 1450 aa32.9■■■□□ 2.86
RIOK1-203ENST00000475351 CYB5RLQ6IPT4 315 aa32.86■■■□□ 2.85
RIOK1-203ENST00000475351 RAD54L2Q9Y4B4 1467 aa32.82■■■□□ 2.84
RIOK1-203ENST00000475351 WDR97A6NE52 1622 aa32.8■■■□□ 2.84
RIOK1-203ENST00000475351 FBLN2P98095 1184 aa32.74■■■□□ 2.83
RIOK1-203ENST00000475351 SOGA1O94964 1423 aa32.74■■■□□ 2.83
RIOK1-203ENST00000475351 CLASP1Q7Z460 1538 aa32.72■■■□□ 2.83
RIOK1-203ENST00000475351 SNAPC4Q5SXM2 1469 aa32.71■■■□□ 2.83
RIOK1-203ENST00000475351 FGD5Q6ZNL6 1462 aa32.71■■■□□ 2.83
RIOK1-203ENST00000475351 TDRD9Q8NDG6 1382 aaKnown RBP32.7■■■□□ 2.83
RIOK1-203ENST00000475351 CUX1P39880 1505 aa32.65■■■□□ 2.82
RIOK1-203ENST00000475351 SYNJ1O43426 1573 aa32.62■■■□□ 2.81
RIOK1-203ENST00000475351 MAGI1Q96QZ7 1491 aaPredicted RBP32.61■■■□□ 2.81
RIOK1-203ENST00000475351 TRHP20396 242 aaPredicted RBP32.59■■■□□ 2.81
RIOK1-203ENST00000475351 PBRM1Q86U86 1689 aa32.56■■■□□ 2.8
RIOK1-203ENST00000475351 GRIN2BQ13224 1484 aa32.54■■■□□ 2.8
RIOK1-203ENST00000475351 SYNJ2O15056 1496 aa32.5■■■□□ 2.79
RIOK1-203ENST00000475351 CHMP7Q8WUX9 453 aaPredicted RBP32.47■■■□□ 2.79
RIOK1-203ENST00000475351 ABCA5Q8WWZ7 1642 aa32.4■■■□□ 2.78
RIOK1-203ENST00000475351 GAPVD1Q14C86 1478 aa32.37■■■□□ 2.77
RIOK1-203ENST00000475351 ABCA10Q8WWZ4 1543 aa32.33■■■□□ 2.77
RIOK1-203ENST00000475351 SUPT5HO00267 1087 aaKnown RBP32.21■■■□□ 2.75
RIOK1-203ENST00000475351 ADAMTS12P58397 1594 aa32.16■■■□□ 2.74
RIOK1-203ENST00000475351 GRIN2AQ12879 1464 aa32.16■■■□□ 2.74
RIOK1-203ENST00000475351 ERCC6L2Q5T890 1561 aa32.15■■■□□ 2.74
RIOK1-203ENST00000475351 BIVM-ERCC5R4GMW8 1640 aa32.11■■■□□ 2.73
RIOK1-203ENST00000475351 CEP170Q5SW79 1584 aa32.11■■■□□ 2.73
RIOK1-203ENST00000475351 NUP160Q12769 1436 aa32.08■■■□□ 2.73
RIOK1-203ENST00000475351 SHROOM2Q13796 1616 aa32.07■■■□□ 2.72
RIOK1-203ENST00000475351 TOP2BQ02880 1626 aa32.04■■■□□ 2.72
RIOK1-203ENST00000475351 WRNQ14191 1432 aaPredicted RBP eCLIP32.04■■■□□ 2.72
RIOK1-203ENST00000475351 FHAD1B1AJZ9 1412 aa31.94■■■□□ 2.7
RIOK1-203ENST00000475351 ERICH3Q5RHP9 1530 aa31.93■■■□□ 2.7
RIOK1-203ENST00000475351 AEBP2Q6ZN18 517 aaPredicted RBP31.91■■■□□ 2.7
RIOK1-203ENST00000475351 KIF13AQ9H1H9 1805 aa31.91■■■□□ 2.7
RIOK1-203ENST00000475351 RUSC2Q8N2Y8 1516 aa31.73■■■□□ 2.67
RIOK1-203ENST00000475351 PRG4Q92954 1404 aaPredicted RBP31.72■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms