RNA–Protein interactions for RNA: ENST00000475125.1

RARA-207, Transcript of retinoic acid receptor alpha, humanhuman

TSL 5

Gene RARA, Length 813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-207ENST00000475125 NISCHQ9Y2I1 1504 aa26.65■■□□□ 1.86
RARA-207ENST00000475125 CCDC180Q9P1Z9 1646 aa23.44■■□□□ 1.34
RARA-207ENST00000475125 ABCC9O60706 1549 aa23■■□□□ 1.27
RARA-207ENST00000475125 DCAF8L2P0C7V8 631 aa22.43■■□□□ 1.18
RARA-207ENST00000475125 ZCCHC6Q5VYS8 1495 aaKnown RBP22.28■■□□□ 1.16
RARA-207ENST00000475125 RB1CC1Q8TDY2 1594 aa22.12■■□□□ 1.13
RARA-207ENST00000475125 NACADO15069 1562 aa22.03■■□□□ 1.12
RARA-207ENST00000475125 DCAF1Q9Y4B6 1507 aa21.98■■□□□ 1.11
RARA-207ENST00000475125 MYO15BQ96JP2 1530 aa21.89■■□□□ 1.09
RARA-207ENST00000475125 UNC13AQ9UPW8 1703 aa21.66■■□□□ 1.06
RARA-207ENST00000475125 SHROOM4Q9ULL8 1493 aa21.61■■□□□ 1.05
RARA-207ENST00000475125 SCRIBQ14160 1630 aa21.52■■□□□ 1.04
RARA-207ENST00000475125 PABPN1Q86U42 306 aaKnown RBP eCLIP21.44■■□□□ 1.02
RARA-207ENST00000475125 BICRAQ9NZM4 1560 aa21.39■■□□□ 1.01
RARA-207ENST00000475125 DNAJC5BQ9UF47 199 aa21.15■□□□□ 0.98
RARA-207ENST00000475125 EIF4G1Q04637 1599 aaKnown RBP20.86■□□□□ 0.93
RARA-207ENST00000475125 CC2D2AQ9P2K1 1620 aa20.83■□□□□ 0.93
RARA-207ENST00000475125 CECR2Q9BXF3 1484 aa20.77■□□□□ 0.92
RARA-207ENST00000475125 BAZ1AQ9NRL2 1556 aaPredicted RBP20.63■□□□□ 0.89
RARA-207ENST00000475125 SUPT5HO00267 1087 aaKnown RBP20.62■□□□□ 0.89
RARA-207ENST00000475125 MROH2BQ7Z745 1585 aa20.58■□□□□ 0.88
RARA-207ENST00000475125 SMARCA4P51532 1647 aa20.55■□□□□ 0.88
RARA-207ENST00000475125 RSF1Q96T23 1441 aaPredicted RBP20.54■□□□□ 0.88
RARA-207ENST00000475125 ATAD2BQ9ULI0 1458 aa20.38■□□□□ 0.85
RARA-207ENST00000475125 WIZO95785 1651 aa20.35■□□□□ 0.85
RARA-207ENST00000475125 SMARCA2P51531 1590 aa20.34■□□□□ 0.85
RARA-207ENST00000475125 NCAPD3P42695 1498 aa20.28■□□□□ 0.84
RARA-207ENST00000475125 BAZ1BQ9UIG0 1483 aaKnown RBP20.28■□□□□ 0.84
RARA-207ENST00000475125 PEG3Q9GZU2 1588 aa20.27■□□□□ 0.84
RARA-207ENST00000475125 HMGXB3Q12766 1538 aa20.21■□□□□ 0.83
RARA-207ENST00000475125 TOP2AP11388 1531 aaKnown RBP20.17■□□□□ 0.82
RARA-207ENST00000475125 CCDC88BA6NC98 1476 aa19.99■□□□□ 0.79
RARA-207ENST00000475125 ERCC6Q03468 1493 aa19.88■□□□□ 0.77
RARA-207ENST00000475125 NESP48681 1621 aa19.84■□□□□ 0.77
RARA-207ENST00000475125 LAMC3Q9Y6N6 1575 aa19.83■□□□□ 0.77
RARA-207ENST00000475125 CADPSQ9ULU8 1353 aa19.78■□□□□ 0.76
RARA-207ENST00000475125 KIF21AQ7Z4S6 1674 aa19.71■□□□□ 0.75
RARA-207ENST00000475125 CFTRP13569 1480 aa19.7■□□□□ 0.74
RARA-207ENST00000475125 CUX2O14529 1486 aa19.69■□□□□ 0.74
RARA-207ENST00000475125 PDS5BQ9NTI5 1447 aa19.68■□□□□ 0.74
RARA-207ENST00000475125 THOC2Q8NI27 1593 aaKnown RBP19.61■□□□□ 0.73
RARA-207ENST00000475125 FANCD2Q9BXW9 1451 aa19.54■□□□□ 0.72
RARA-207ENST00000475125 PRDM2Q13029 1718 aa19.54■□□□□ 0.72
RARA-207ENST00000475125 CEP164Q9UPV0 1460 aa19.5■□□□□ 0.71
RARA-207ENST00000475125 MRC2Q9UBG0 1479 aa19.48■□□□□ 0.71
RARA-207ENST00000475125 WDR62O43379 1518 aa19.42■□□□□ 0.7
RARA-207ENST00000475125 CHIC1Q5VXU3 224 aa19.42■□□□□ 0.7
RARA-207ENST00000475125 TRIM41Q8WV44 630 aa19.42■□□□□ 0.7
RARA-207ENST00000475125 ABCC8Q09428 1581 aa19.4■□□□□ 0.7
RARA-207ENST00000475125 WRNQ14191 1432 aaPredicted RBP eCLIP19.39■□□□□ 0.69
RARA-207ENST00000475125 URB2Q14146 1524 aaKnown RBP19.28■□□□□ 0.68
RARA-207ENST00000475125 CUX1P39880 1505 aa19.27■□□□□ 0.68
RARA-207ENST00000475125 DNAJC5Q9H3Z4 198 aa19.27■□□□□ 0.68
RARA-207ENST00000475125 TOPBP1Q92547 1522 aa19.25■□□□□ 0.67
RARA-207ENST00000475125 SYNJ1O43426 1573 aa19.23■□□□□ 0.67
RARA-207ENST00000475125 DNMBPQ6XZF7 1577 aa19.23■□□□□ 0.67
RARA-207ENST00000475125 TOP2BQ02880 1626 aa19.18■□□□□ 0.66
RARA-207ENST00000475125 FGD5Q6ZNL6 1462 aa19.16■□□□□ 0.66
RARA-207ENST00000475125 SOGA1O94964 1423 aa19.13■□□□□ 0.65
RARA-207ENST00000475125 BIVM-ERCC5R4GMW8 1640 aa19.13■□□□□ 0.65
RARA-207ENST00000475125 POLA1P09884 1462 aaPredicted RBP19.12■□□□□ 0.65
RARA-207ENST00000475125 RAD54L2Q9Y4B4 1467 aa19.09■□□□□ 0.65
RARA-207ENST00000475125 FAM9AQ8IZU1 332 aaPredicted RBP19.08■□□□□ 0.64
RARA-207ENST00000475125 IFT140Q96RY7 1462 aa19.08■□□□□ 0.64
RARA-207ENST00000475125 TDRD9Q8NDG6 1382 aaKnown RBP19■□□□□ 0.63
RARA-207ENST00000475125 TARBP1Q13395 1621 aaKnown RBP18.97■□□□□ 0.63
RARA-207ENST00000475125 ZNF608Q9ULD9 1512 aaPredicted RBP18.97■□□□□ 0.63
RARA-207ENST00000475125 KIF27Q86VH2 1401 aa18.97■□□□□ 0.63
RARA-207ENST00000475125 EIF4G3O43432 1585 aaKnown RBP18.96■□□□□ 0.63
RARA-207ENST00000475125 ABCA10Q8WWZ4 1543 aa18.95■□□□□ 0.62
RARA-207ENST00000475125 AQRO60306 1485 aaKnown RBP eCLIP18.92■□□□□ 0.623e-8■■■■■ 32.3
RARA-207ENST00000475125 RUSC2Q8N2Y8 1516 aa18.92■□□□□ 0.62
RARA-207ENST00000475125 CSRNP3Q8WYN3 585 aa18.89■□□□□ 0.61
RARA-207ENST00000475125 GAPVD1Q14C86 1478 aa18.88■□□□□ 0.61
RARA-207ENST00000475125 EEA1Q15075 1411 aa18.87■□□□□ 0.61
RARA-207ENST00000475125 EHMT2Q96KQ7 1210 aa18.87■□□□□ 0.61
RARA-207ENST00000475125 WDR97A6NE52 1622 aa18.85■□□□□ 0.61
RARA-207ENST00000475125 OSCARQ8IYS5 282 aa18.84■□□□□ 0.61
RARA-207ENST00000475125 IGF1RP08069 1367 aa18.81■□□□□ 0.6
RARA-207ENST00000475125 GRIN2BQ13224 1484 aa18.8■□□□□ 0.6
RARA-207ENST00000475125 CHD1O14646 1710 aa18.8■□□□□ 0.6
RARA-207ENST00000475125 ABCA5Q8WWZ7 1642 aa18.78■□□□□ 0.6
RARA-207ENST00000475125 FBLN2P98095 1184 aa18.77■□□□□ 0.6
RARA-207ENST00000475125 PBRM1Q86U86 1689 aa18.76■□□□□ 0.59
RARA-207ENST00000475125 CARMIL1Q5VZK9 1371 aa18.75■□□□□ 0.59
RARA-207ENST00000475125 SNAPC4Q5SXM2 1469 aa18.72■□□□□ 0.59
RARA-207ENST00000475125 CHMP7Q8WUX9 453 aaPredicted RBP18.72■□□□□ 0.59
RARA-207ENST00000475125 ERICH3Q5RHP9 1530 aa18.72■□□□□ 0.59
RARA-207ENST00000475125 LOC105371045A0A1W2PR82 267 aa18.7■□□□□ 0.58
RARA-207ENST00000475125 UBTFP17480 764 aaKnown RBP18.69■□□□□ 0.58
RARA-207ENST00000475125 MAGI1Q96QZ7 1491 aaPredicted RBP18.68■□□□□ 0.58
RARA-207ENST00000475125 FHAD1B1AJZ9 1412 aa18.67■□□□□ 0.58
RARA-207ENST00000475125 PRXQ9BXM0 1461 aa18.65■□□□□ 0.58
RARA-207ENST00000475125 RAPGEF2Q9Y4G8 1499 aa18.65■□□□□ 0.58
RARA-207ENST00000475125 CUL7Q14999 1698 aa18.61■□□□□ 0.57
RARA-207ENST00000475125 GOLGA3Q08378 1498 aa18.61■□□□□ 0.57
RARA-207ENST00000475125 SYNJ2O15056 1496 aa18.6■□□□□ 0.57
RARA-207ENST00000475125 RIMBP3CA6NJZ7 1639 aa18.6■□□□□ 0.57
RARA-207ENST00000475125 RIMBP3BA6NNM3 1639 aa18.6■□□□□ 0.57
RARA-207ENST00000475125 RIMBP3Q9UFD9 1639 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 204.3 ms