RNA–Protein interactions for RNA: ENST00000474659.5

FAM213B-208, Transcript of Prostamide/prostaglandin F synthase, human

TSL 2

Gene FAM213B, Length 785 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM213B-208	ENST00000474659	NISCH	Q9Y2I1	1504 aa		56.89	■■■■■ 6.7
FAM213B-208	ENST00000474659	CCDC180	Q9P1Z9	1646 aa		50.62	■■■■■ 5.69
FAM213B-208	ENST00000474659	ABCC9	O60706	1549 aa		49.85	■■■■■ 5.57
FAM213B-208	ENST00000474659	RB1CC1	Q8TDY2	1594 aa		47.67	■■■■■ 5.22
FAM213B-208	ENST00000474659	NACAD	O15069	1562 aa		47.63	■■■■■ 5.22
FAM213B-208	ENST00000474659	MYO15B	Q96JP2	1530 aa		47.4	■■■■■ 5.18
FAM213B-208	ENST00000474659	ZCCHC6	Q5VYS8	1495 aa	Known RBP	47.39	■■■■■ 5.18
FAM213B-208	ENST00000474659	DCAF8L2	P0C7V8	631 aa		47.37	■■■■■ 5.17
FAM213B-208	ENST00000474659	DCAF1	Q9Y4B6	1507 aa		47.14	■■■■■ 5.14
FAM213B-208	ENST00000474659	DNAJC5B	Q9UF47	199 aa		46.65	■■■■■ 5.06
FAM213B-208	ENST00000474659	UNC13A	Q9UPW8	1703 aa		46.54	■■■■■ 5.04
FAM213B-208	ENST00000474659	PABPN1	Q86U42	306 aa	Known RBP eCLIP	46.48	■■■■■ 5.03
FAM213B-208	ENST00000474659	BICRA	Q9NZM4	1560 aa		46.27	■■■■■ 5
FAM213B-208	ENST00000474659	SCRIB	Q14160	1630 aa		46.08	■■■■■ 4.97
FAM213B-208	ENST00000474659	SHROOM4	Q9ULL8	1493 aa		45.86	■■■■■ 4.93
FAM213B-208	ENST00000474659	EIF4G1	Q04637	1599 aa	Known RBP	45.03	■■■■■ 4.8
FAM213B-208	ENST00000474659	CC2D2A	Q9P2K1	1620 aa		44.99	■■■■■ 4.79
FAM213B-208	ENST00000474659	CECR2	Q9BXF3	1484 aa		44.87	■■■■■ 4.77
FAM213B-208	ENST00000474659	SMARCA4	P51532	1647 aa		44.13	■■■■■ 4.66
FAM213B-208	ENST00000474659	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	44.09	■■■■■ 4.65
FAM213B-208	ENST00000474659	NCAPD3	P42695	1498 aa		43.98	■■■■■ 4.63
FAM213B-208	ENST00000474659	ATAD2B	Q9ULI0	1458 aa		43.96	■■■■■ 4.63
FAM213B-208	ENST00000474659	SMARCA2	P51531	1590 aa		43.88	■■■■■ 4.62
FAM213B-208	ENST00000474659	MROH2B	Q7Z745	1585 aa		43.81	■■■■■ 4.6
FAM213B-208	ENST00000474659	PEG3	Q9GZU2	1588 aa		43.8	■■■■■ 4.6
FAM213B-208	ENST00000474659	HMGXB3	Q12766	1538 aa		43.74	■■■■■ 4.59
FAM213B-208	ENST00000474659	BAZ1B	Q9UIG0	1483 aa	Known RBP	43.55	■■■■■ 4.56
FAM213B-208	ENST00000474659	RSF1	Q96T23	1441 aa	Predicted RBP	43.3	■■■■■ 4.52
FAM213B-208	ENST00000474659	WIZ	O95785	1651 aa		43.28	■■■■■ 4.52
FAM213B-208	ENST00000474659	ERCC6	Q03468	1493 aa		43.06	■■■■■ 4.48
FAM213B-208	ENST00000474659	TOP2A	P11388	1531 aa	Known RBP	42.88	■■■■■ 4.46
FAM213B-208	ENST00000474659	NES	P48681	1621 aa		42.86	■■■■■ 4.45
FAM213B-208	ENST00000474659	CUX2	O14529	1486 aa		42.85	■■■■■ 4.45
FAM213B-208	ENST00000474659	LAMC3	Q9Y6N6	1575 aa		42.8	■■■■■ 4.44
FAM213B-208	ENST00000474659	DNAJC5	Q9H3Z4	198 aa		42.74	■■■■■ 4.43
FAM213B-208	ENST00000474659	CADPS	Q9ULU8	1353 aa		42.65	■■■■■ 4.42
FAM213B-208	ENST00000474659	PDS5B	Q9NTI5	1447 aa		42.5	■■■■■ 4.39
FAM213B-208	ENST00000474659	CFTR	P13569	1480 aa		42.41	■■■■■ 4.38
FAM213B-208	ENST00000474659	CCDC88B	A6NC98	1476 aa		42.36	■■■■■ 4.37
FAM213B-208	ENST00000474659	KIF21A	Q7Z4S6	1674 aa		42.33	■■■■■ 4.37
FAM213B-208	ENST00000474659	THOC2	Q8NI27	1593 aa	Known RBP	42.31	■■■■■ 4.36
FAM213B-208	ENST00000474659	FANCD2	Q9BXW9	1451 aa		42.14	■■■■■ 4.34
FAM213B-208	ENST00000474659	CEP164	Q9UPV0	1460 aa		42.1	■■■■■ 4.33
FAM213B-208	ENST00000474659	MRC2	Q9UBG0	1479 aa		42.07	■■■■■ 4.33
FAM213B-208	ENST00000474659	PRDM2	Q13029	1718 aa		41.99	■■■■■ 4.31
FAM213B-208	ENST00000474659	WDR62	O43379	1518 aa		41.96	■■■■■ 4.31
FAM213B-208	ENST00000474659	SUPT5H	O00267	1087 aa	Known RBP	41.95	■■■■■ 4.31
FAM213B-208	ENST00000474659	URB2	Q14146	1524 aa	Known RBP	41.74	■■■■■ 4.27
FAM213B-208	ENST00000474659	ABCC8	Q09428	1581 aa		41.48	■■■■■ 4.23
FAM213B-208	ENST00000474659	TOPBP1	Q92547	1522 aa		41.46	■■■■■ 4.23
FAM213B-208	ENST00000474659	DNMBP	Q6XZF7	1577 aa		41.41	■■■■■ 4.22
FAM213B-208	ENST00000474659	IFT140	Q96RY7	1462 aa		41.24	■■■■■ 4.19
FAM213B-208	ENST00000474659	POLA1	P09884	1462 aa	Predicted RBP	41.11	■■■■■ 4.17
FAM213B-208	ENST00000474659	CUX1	P39880	1505 aa		41.11	■■■■■ 4.17
FAM213B-208	ENST00000474659	TRIM41	Q8WV44	630 aa		41.05	■■■■■ 4.16
FAM213B-208	ENST00000474659	TARBP1	Q13395	1621 aa	Known RBP	41.04	■■■■■ 4.16
FAM213B-208	ENST00000474659	ZNF608	Q9ULD9	1512 aa	Predicted RBP	41.03	■■■■■ 4.16
FAM213B-208	ENST00000474659	OSCAR	Q8IYS5	282 aa		41	■■■■■ 4.15
FAM213B-208	ENST00000474659	FGD5	Q6ZNL6	1462 aa		40.97	■■■■■ 4.15
FAM213B-208	ENST00000474659	SOGA1	O94964	1423 aa		40.92	■■■■■ 4.14
FAM213B-208	ENST00000474659	RAD54L2	Q9Y4B4	1467 aa		40.89	■■■■■ 4.14
FAM213B-208	ENST00000474659	EIF4G3	O43432	1585 aa	Known RBP	40.86	■■■■■ 4.13
FAM213B-208	ENST00000474659	WRN	Q14191	1432 aa	Predicted RBP eCLIP	40.8	■■■■■ 4.12
FAM213B-208	ENST00000474659	AQR	O60306	1485 aa	Known RBP eCLIP	40.77	■■■■■ 4.12	6e-7	■■■□□ 18.4
FAM213B-208	ENST00000474659	WDR97	A6NE52	1622 aa		40.75	■■■■■ 4.11
FAM213B-208	ENST00000474659	TOP2B	Q02880	1626 aa		40.74	■■■■■ 4.11
FAM213B-208	ENST00000474659	BIVM-ERCC5	R4GMW8	1640 aa		40.73	■■■■■ 4.11
FAM213B-208	ENST00000474659	SYNJ1	O43426	1573 aa		40.69	■■■■■ 4.11
FAM213B-208	ENST00000474659	TDRD9	Q8NDG6	1382 aa	Known RBP	40.68	■■■■■ 4.1
FAM213B-208	ENST00000474659	ABCA10	Q8WWZ4	1543 aa		40.62	■■■■■ 4.09
FAM213B-208	ENST00000474659	GRIN2B	Q13224	1484 aa		40.47	■■■■■ 4.07
FAM213B-208	ENST00000474659	ABCA5	Q8WWZ7	1642 aa		40.45	■■■■■ 4.07
FAM213B-208	ENST00000474659	GAPVD1	Q14C86	1478 aa		40.45	■■■■■ 4.07
FAM213B-208	ENST00000474659	SNAPC4	Q5SXM2	1469 aa		40.4	■■■■■ 4.06
FAM213B-208	ENST00000474659	RIMBP3C	A6NJZ7	1639 aa		40.4	■■■■■ 4.06
FAM213B-208	ENST00000474659	RIMBP3B	A6NNM3	1639 aa		40.4	■■■■■ 4.06
FAM213B-208	ENST00000474659	RIMBP3	Q9UFD9	1639 aa		40.4	■■■■■ 4.06
FAM213B-208	ENST00000474659	MAGI1	Q96QZ7	1491 aa	Predicted RBP	40.39	■■■■■ 4.06
FAM213B-208	ENST00000474659	FBLN2	P98095	1184 aa		40.37	■■■■■ 4.05
FAM213B-208	ENST00000474659	PBRM1	Q86U86	1689 aa		40.32	■■■■■ 4.05
FAM213B-208	ENST00000474659	CHD1	O14646	1710 aa		40.32	■■■■■ 4.05
FAM213B-208	ENST00000474659	ARHGEF11	O15085	1522 aa		40.27	■■■■■ 4.04
FAM213B-208	ENST00000474659	SYNJ2	O15056	1496 aa		40.23	■■■■■ 4.03
FAM213B-208	ENST00000474659	CHMP7	Q8WUX9	453 aa	Predicted RBP	40.15	■■■■■ 4.02
FAM213B-208	ENST00000474659	ERICH3	Q5RHP9	1530 aa		40.12	■■■■■ 4.01
FAM213B-208	ENST00000474659	CYB5RL	Q6IPT4	315 aa		40.08	■■■■■ 4.01
FAM213B-208	ENST00000474659	ADAMTS12	P58397	1594 aa		40.06	■■■■■ 4
FAM213B-208	ENST00000474659	FHAD1	B1AJZ9	1412 aa		40	■■■■□ 3.99
FAM213B-208	ENST00000474659	CLASP1	Q7Z460	1538 aa		39.98	■■■■□ 3.99
FAM213B-208	ENST00000474659	KIF27	Q86VH2	1401 aa		39.96	■■■■□ 3.99
FAM213B-208	ENST00000474659	GRIN2A	Q12879	1464 aa		39.95	■■■■□ 3.99
FAM213B-208	ENST00000474659	ARAP1	Q96P48	1450 aa		39.88	■■■■□ 3.98
FAM213B-208	ENST00000474659	IGF1R	P08069	1367 aa		39.84	■■■■□ 3.97
FAM213B-208	ENST00000474659	NUP160	Q12769	1436 aa		39.82	■■■■□ 3.97
FAM213B-208	ENST00000474659	CEP170	Q5SW79	1584 aa		39.75	■■■■□ 3.95
FAM213B-208	ENST00000474659	CUL7	Q14999	1698 aa		39.7	■■■■□ 3.95
FAM213B-208	ENST00000474659	TRH	P20396	242 aa	Predicted RBP	39.65	■■■■□ 3.94
FAM213B-208	ENST00000474659	CARMIL1	Q5VZK9	1371 aa		39.56	■■■■□ 3.92
FAM213B-208	ENST00000474659	RUSC2	Q8N2Y8	1516 aa		39.52	■■■■□ 3.92
FAM213B-208	ENST00000474659	SHROOM2	Q13796	1616 aa		39.51	■■■■□ 3.92

Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms