RNA–Protein interactions for RNA: ENST00000474556.5

IFRD2-210, Transcript of interferon related developmental regulator 2, humanhuman

TSL 5

Gene IFRD2, Length 1,812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFRD2-210ENST00000474556 NISCHQ9Y2I1 1504 aa38.27■■■■□ 3.72
IFRD2-210ENST00000474556 CCDC180Q9P1Z9 1646 aa33.54■■■□□ 2.96
IFRD2-210ENST00000474556 ABCC9O60706 1549 aa32.76■■■□□ 2.83
IFRD2-210ENST00000474556 ZCCHC6Q5VYS8 1495 aaKnown RBP32.13■■■□□ 2.73
IFRD2-210ENST00000474556 DCAF1Q9Y4B6 1507 aa31.68■■■□□ 2.66
IFRD2-210ENST00000474556 DCAF8L2P0C7V8 631 aa31.65■■■□□ 2.66
IFRD2-210ENST00000474556 NACADO15069 1562 aa31.51■■■□□ 2.64
IFRD2-210ENST00000474556 RB1CC1Q8TDY2 1594 aa31.51■■■□□ 2.63
IFRD2-210ENST00000474556 MYO15BQ96JP2 1530 aa31.37■■■□□ 2.61
IFRD2-210ENST00000474556 SHROOM4Q9ULL8 1493 aa31.08■■■□□ 2.57
IFRD2-210ENST00000474556 UNC13AQ9UPW8 1703 aa30.8■■■□□ 2.52
IFRD2-210ENST00000474556 SCRIBQ14160 1630 aa30.7■■■□□ 2.5
IFRD2-210ENST00000474556 PABPN1Q86U42 306 aaKnown RBP eCLIP30.68■■■□□ 2.5
IFRD2-210ENST00000474556 BICRAQ9NZM4 1560 aa30.6■■■□□ 2.49
IFRD2-210ENST00000474556 DNAJC5BQ9UF47 199 aa29.96■■■□□ 2.39
IFRD2-210ENST00000474556 SUPT5HO00267 1087 aaKnown RBP29.89■■■□□ 2.38
IFRD2-210ENST00000474556 EIF4G1Q04637 1599 aaKnown RBP29.77■■■□□ 2.36
IFRD2-210ENST00000474556 CECR2Q9BXF3 1484 aa29.74■■■□□ 2.35
IFRD2-210ENST00000474556 RSF1Q96T23 1441 aaPredicted RBP29.67■■■□□ 2.34
IFRD2-210ENST00000474556 CC2D2AQ9P2K1 1620 aa29.61■■■□□ 2.33
IFRD2-210ENST00000474556 MROH2BQ7Z745 1585 aa29.56■■■□□ 2.32
IFRD2-210ENST00000474556 BAZ1AQ9NRL2 1556 aaPredicted RBP29.54■■■□□ 2.32
IFRD2-210ENST00000474556 SMARCA4P51532 1647 aa29.4■■■□□ 2.3
IFRD2-210ENST00000474556 WIZO95785 1651 aa29.29■■■□□ 2.28
IFRD2-210ENST00000474556 ATAD2BQ9ULI0 1458 aa29.17■■■□□ 2.26
IFRD2-210ENST00000474556 NCAPD3P42695 1498 aa29.11■■■□□ 2.25
IFRD2-210ENST00000474556 PEG3Q9GZU2 1588 aa29.1■■■□□ 2.25
IFRD2-210ENST00000474556 SMARCA2P51531 1590 aa29.1■■■□□ 2.25
IFRD2-210ENST00000474556 TOP2AP11388 1531 aaKnown RBP28.99■■■□□ 2.23
IFRD2-210ENST00000474556 HMGXB3Q12766 1538 aa28.96■■■□□ 2.23
IFRD2-210ENST00000474556 BAZ1BQ9UIG0 1483 aaKnown RBP28.93■■■□□ 2.22
IFRD2-210ENST00000474556 CCDC88BA6NC98 1476 aa28.71■■■□□ 2.19
IFRD2-210ENST00000474556 CHIC1Q5VXU3 224 aa28.65■■■□□ 2.18
IFRD2-210ENST00000474556 NESP48681 1621 aa28.41■■■□□ 2.14
IFRD2-210ENST00000474556 CADPSQ9ULU8 1353 aa28.28■■■□□ 2.12
IFRD2-210ENST00000474556 LAMC3Q9Y6N6 1575 aa28.28■■■□□ 2.12
IFRD2-210ENST00000474556 ERCC6Q03468 1493 aa28.19■■■□□ 2.1
IFRD2-210ENST00000474556 CFTRP13569 1480 aa28.14■■■□□ 2.1
IFRD2-210ENST00000474556 TRIM41Q8WV44 630 aa28.13■■■□□ 2.09
IFRD2-210ENST00000474556 PDS5BQ9NTI5 1447 aa28.11■■■□□ 2.09
IFRD2-210ENST00000474556 ABCC8Q09428 1581 aa28.05■■■□□ 2.08
IFRD2-210ENST00000474556 KIF21AQ7Z4S6 1674 aa28.01■■■□□ 2.08
IFRD2-210ENST00000474556 FANCD2Q9BXW9 1451 aa27.96■■■□□ 2.07
IFRD2-210ENST00000474556 WRNQ14191 1432 aaPredicted RBP eCLIP27.9■■■□□ 2.06
IFRD2-210ENST00000474556 CEP164Q9UPV0 1460 aa27.89■■■□□ 2.06
IFRD2-210ENST00000474556 THOC2Q8NI27 1593 aaKnown RBP27.89■■■□□ 2.05
IFRD2-210ENST00000474556 PRDM2Q13029 1718 aa27.88■■■□□ 2.05
IFRD2-210ENST00000474556 MRC2Q9UBG0 1479 aa27.82■■■□□ 2.04
IFRD2-210ENST00000474556 CUX2O14529 1486 aa27.8■■■□□ 2.04
IFRD2-210ENST00000474556 SYNJ1O43426 1573 aa27.79■■■□□ 2.04
IFRD2-210ENST00000474556 WDR62O43379 1518 aa27.72■■■□□ 2.03
IFRD2-210ENST00000474556 TOP2BQ02880 1626 aa27.69■■■□□ 2.02
IFRD2-210ENST00000474556 URB2Q14146 1524 aaKnown RBP27.68■■■□□ 2.02
IFRD2-210ENST00000474556 BIVM-ERCC5R4GMW8 1640 aa27.66■■■□□ 2.02
IFRD2-210ENST00000474556 CUX1P39880 1505 aa27.63■■■□□ 2.01
IFRD2-210ENST00000474556 FAM9AQ8IZU1 332 aaPredicted RBP27.57■■■□□ 2
IFRD2-210ENST00000474556 SOGA1O94964 1423 aa27.54■■■□□ 2
IFRD2-210ENST00000474556 TOPBP1Q92547 1522 aa27.53■■■□□ 2
IFRD2-210ENST00000474556 LOC105371045A0A1W2PR82 267 aa27.53■■■□□ 2
IFRD2-210ENST00000474556 DNMBPQ6XZF7 1577 aa27.49■■□□□ 1.99
IFRD2-210ENST00000474556 EEA1Q15075 1411 aa27.48■■□□□ 1.99
IFRD2-210ENST00000474556 RUSC2Q8N2Y8 1516 aa27.44■■□□□ 1.98
IFRD2-210ENST00000474556 CSRNP3Q8WYN3 585 aa27.34■■□□□ 1.97
IFRD2-210ENST00000474556 FGD5Q6ZNL6 1462 aa27.32■■□□□ 1.96
IFRD2-210ENST00000474556 POLA1P09884 1462 aaPredicted RBP27.31■■□□□ 1.96
IFRD2-210ENST00000474556 IFT140Q96RY7 1462 aa27.29■■□□□ 1.96
IFRD2-210ENST00000474556 RAD54L2Q9Y4B4 1467 aa27.22■■□□□ 1.95
IFRD2-210ENST00000474556 ZNF608Q9ULD9 1512 aaPredicted RBP27.21■■□□□ 1.95
IFRD2-210ENST00000474556 TARBP1Q13395 1621 aaKnown RBP27.21■■□□□ 1.95
IFRD2-210ENST00000474556 KIF27Q86VH2 1401 aa27.2■■□□□ 1.94
IFRD2-210ENST00000474556 EHMT2Q96KQ7 1210 aa27.13■■□□□ 1.93
IFRD2-210ENST00000474556 KIF21BO75037 1637 aa27.12■■□□□ 1.93
IFRD2-210ENST00000474556 ABCA10Q8WWZ4 1543 aa27.11■■□□□ 1.93
IFRD2-210ENST00000474556 AQRO60306 1485 aaKnown RBP eCLIP27.08■■□□□ 1.938e-7■■■■■ 27.9
IFRD2-210ENST00000474556 EIF4G3O43432 1585 aaKnown RBP27.07■■□□□ 1.92
IFRD2-210ENST00000474556 GOLGA3Q08378 1498 aa27.07■■□□□ 1.92
IFRD2-210ENST00000474556 TDRD9Q8NDG6 1382 aaKnown RBP27.07■■□□□ 1.92
IFRD2-210ENST00000474556 PRXQ9BXM0 1461 aa27.04■■□□□ 1.92
IFRD2-210ENST00000474556 TNIKQ9UKE5 1360 aa27.01■■□□□ 1.92
IFRD2-210ENST00000474556 WDR97A6NE52 1622 aa27.01■■□□□ 1.91
IFRD2-210ENST00000474556 IGF1RP08069 1367 aa27.01■■□□□ 1.91
IFRD2-210ENST00000474556 RAPGEF2Q9Y4G8 1499 aa26.98■■□□□ 1.91
IFRD2-210ENST00000474556 ERICH3Q5RHP9 1530 aa26.96■■□□□ 1.91
IFRD2-210ENST00000474556 UBTFP17480 764 aaKnown RBP26.93■■□□□ 1.9
IFRD2-210ENST00000474556 GAPVD1Q14C86 1478 aa26.89■■□□□ 1.9
IFRD2-210ENST00000474556 ABCA5Q8WWZ7 1642 aa26.88■■□□□ 1.89
IFRD2-210ENST00000474556 GRIN2BQ13224 1484 aa26.85■■□□□ 1.89
IFRD2-210ENST00000474556 CARMIL1Q5VZK9 1371 aa26.83■■□□□ 1.89
IFRD2-210ENST00000474556 CEP162Q5TB80 1403 aa26.83■■□□□ 1.89
IFRD2-210ENST00000474556 SNAPC4Q5SXM2 1469 aa26.81■■□□□ 1.88
IFRD2-210ENST00000474556 DNAJC5Q9H3Z4 198 aa26.79■■□□□ 1.88
IFRD2-210ENST00000474556 PBRM1Q86U86 1689 aa26.78■■□□□ 1.88
IFRD2-210ENST00000474556 CUL7Q14999 1698 aa26.75■■□□□ 1.87
IFRD2-210ENST00000474556 MAGI1Q96QZ7 1491 aaPredicted RBP26.75■■□□□ 1.87
IFRD2-210ENST00000474556 FBLN2P98095 1184 aa26.73■■□□□ 1.87
IFRD2-210ENST00000474556 OSCARQ8IYS5 282 aa26.72■■□□□ 1.87
IFRD2-210ENST00000474556 CHD1O14646 1710 aa26.68■■□□□ 1.86
IFRD2-210ENST00000474556 SYNJ2O15056 1496 aa26.66■■□□□ 1.86
IFRD2-210ENST00000474556 CHMP7Q8WUX9 453 aaPredicted RBP26.65■■□□□ 1.86
IFRD2-210ENST00000474556 CLIP1P30622 1438 aa26.64■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms