RNA–Protein interactions for RNA: ENST00000474380.1

LAMB1-210, Transcript of laminin subunit beta 1, humanhuman

TSL 5

Gene LAMB1, Length 945 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB1-210ENST00000474380 NISCHQ9Y2I1 1504 aa21.85■■□□□ 1.09
LAMB1-210ENST00000474380 CCDC180Q9P1Z9 1646 aa19.13■□□□□ 0.65
LAMB1-210ENST00000474380 AEBP2Q6ZN18 517 aaPredicted RBP18.76■□□□□ 0.59
LAMB1-210ENST00000474380 ABCC9O60706 1549 aa18.7■□□□□ 0.58
LAMB1-210ENST00000474380 ZCCHC6Q5VYS8 1495 aaKnown RBP18.27■□□□□ 0.52
LAMB1-210ENST00000474380 DCAF8L2P0C7V8 631 aa18.22■□□□□ 0.51
LAMB1-210ENST00000474380 DCAF1Q9Y4B6 1507 aa18.07■□□□□ 0.48
LAMB1-210ENST00000474380 CHIC1Q5VXU3 224 aa18.06■□□□□ 0.48
LAMB1-210ENST00000474380 MYO15BQ96JP2 1530 aa17.93■□□□□ 0.46
LAMB1-210ENST00000474380 NACADO15069 1562 aa17.9■□□□□ 0.46
LAMB1-210ENST00000474380 RB1CC1Q8TDY2 1594 aa17.87■□□□□ 0.45
LAMB1-210ENST00000474380 SHROOM4Q9ULL8 1493 aa17.69■□□□□ 0.42
LAMB1-210ENST00000474380 SCRIBQ14160 1630 aa17.55■□□□□ 0.4
LAMB1-210ENST00000474380 PABPN1Q86U42 306 aaKnown RBP eCLIP17.53■□□□□ 0.4
LAMB1-210ENST00000474380 DNAJC5BQ9UF47 199 aa17.35■□□□□ 0.37
LAMB1-210ENST00000474380 UNC13AQ9UPW8 1703 aa17.35■□□□□ 0.37
LAMB1-210ENST00000474380 BICRAQ9NZM4 1560 aa17.21■□□□□ 0.35
LAMB1-210ENST00000474380 CECR2Q9BXF3 1484 aa16.98■□□□□ 0.31
LAMB1-210ENST00000474380 SUPT5HO00267 1087 aaKnown RBP16.97■□□□□ 0.31
LAMB1-210ENST00000474380 BAZ1AQ9NRL2 1556 aaPredicted RBP16.89■□□□□ 0.3
LAMB1-210ENST00000474380 RSF1Q96T23 1441 aaPredicted RBP16.87■□□□□ 0.29
LAMB1-210ENST00000474380 MROH2BQ7Z745 1585 aa16.85■□□□□ 0.29
LAMB1-210ENST00000474380 EIF4G1Q04637 1599 aaKnown RBP16.85■□□□□ 0.29
LAMB1-210ENST00000474380 CC2D2AQ9P2K1 1620 aa16.83■□□□□ 0.28
LAMB1-210ENST00000474380 SMARCA4P51532 1647 aa16.81■□□□□ 0.28
LAMB1-210ENST00000474380 WIZO95785 1651 aa16.7■□□□□ 0.26
LAMB1-210ENST00000474380 ATAD2BQ9ULI0 1458 aa16.61■□□□□ 0.25
LAMB1-210ENST00000474380 SMARCA2P51531 1590 aa16.61■□□□□ 0.25
LAMB1-210ENST00000474380 PEG3Q9GZU2 1588 aa16.61■□□□□ 0.25
LAMB1-210ENST00000474380 TOP2AP11388 1531 aaKnown RBP16.53■□□□□ 0.24
LAMB1-210ENST00000474380 NCAPD3P42695 1498 aa16.53■□□□□ 0.24
LAMB1-210ENST00000474380 BAZ1BQ9UIG0 1483 aaKnown RBP16.52■□□□□ 0.23
LAMB1-210ENST00000474380 HMGXB3Q12766 1538 aa16.45■□□□□ 0.22
LAMB1-210ENST00000474380 CCDC88BA6NC98 1476 aa16.39■□□□□ 0.21
LAMB1-210ENST00000474380 ERCC6Q03468 1493 aa16.21■□□□□ 0.19
LAMB1-210ENST00000474380 CADPSQ9ULU8 1353 aa16.11■□□□□ 0.17
LAMB1-210ENST00000474380 SENP3Q9H4L4 574 aaPredicted RBP16.1■□□□□ 0.17
LAMB1-210ENST00000474380 CFTRP13569 1480 aa16.09■□□□□ 0.17
LAMB1-210ENST00000474380 NESP48681 1621 aa16.06■□□□□ 0.16
LAMB1-210ENST00000474380 CUX2O14529 1486 aa16.03■□□□□ 0.16
LAMB1-210ENST00000474380 PDS5BQ9NTI5 1447 aa16.02■□□□□ 0.16
LAMB1-210ENST00000474380 LAMC3Q9Y6N6 1575 aa16■□□□□ 0.15
LAMB1-210ENST00000474380 TRIM41Q8WV44 630 aa16■□□□□ 0.15
LAMB1-210ENST00000474380 PRDM2Q13029 1718 aa15.94■□□□□ 0.14
LAMB1-210ENST00000474380 ABCC8Q09428 1581 aa15.93■□□□□ 0.14
LAMB1-210ENST00000474380 WRNQ14191 1432 aaPredicted RBP eCLIP15.9■□□□□ 0.14
LAMB1-210ENST00000474380 FANCD2Q9BXW9 1451 aa15.9■□□□□ 0.14
LAMB1-210ENST00000474380 DNAJC5Q9H3Z4 198 aa15.87■□□□□ 0.13
LAMB1-210ENST00000474380 PHF23Q9BUL5 403 aaPredicted RBP15.84■□□□□ 0.13
LAMB1-210ENST00000474380 CEP164Q9UPV0 1460 aa15.82■□□□□ 0.12
LAMB1-210ENST00000474380 SYNJ1O43426 1573 aa15.79■□□□□ 0.12
LAMB1-210ENST00000474380 MRC2Q9UBG0 1479 aa15.78■□□□□ 0.12
LAMB1-210ENST00000474380 KIF21AQ7Z4S6 1674 aa15.78■□□□□ 0.12
LAMB1-210ENST00000474380 THOC2Q8NI27 1593 aaKnown RBP15.77■□□□□ 0.11
LAMB1-210ENST00000474380 TOP2BQ02880 1626 aa15.76■□□□□ 0.11
LAMB1-210ENST00000474380 CUX1P39880 1505 aa15.76■□□□□ 0.11
LAMB1-210ENST00000474380 BIVM-ERCC5R4GMW8 1640 aa15.75■□□□□ 0.11
LAMB1-210ENST00000474380 DNMBPQ6XZF7 1577 aa15.7■□□□□ 0.1
LAMB1-210ENST00000474380 TOPBP1Q92547 1522 aa15.69■□□□□ 0.1
LAMB1-210ENST00000474380 URB2Q14146 1524 aaKnown RBP15.68■□□□□ 0.1
LAMB1-210ENST00000474380 FAM9AQ8IZU1 332 aaPredicted RBP15.68■□□□□ 0.1
LAMB1-210ENST00000474380 WDR62O43379 1518 aa15.68■□□□□ 0.1
LAMB1-210ENST00000474380 FGD5Q6ZNL6 1462 aa15.65■□□□□ 0.1
LAMB1-210ENST00000474380 SOGA1O94964 1423 aa15.62■□□□□ 0.09
LAMB1-210ENST00000474380 EEA1Q15075 1411 aa15.6■□□□□ 0.09
LAMB1-210ENST00000474380 POLA1P09884 1462 aaPredicted RBP15.59■□□□□ 0.09
LAMB1-210ENST00000474380 CSRNP3Q8WYN3 585 aa15.57■□□□□ 0.08
LAMB1-210ENST00000474380 RUSC2Q8N2Y8 1516 aa15.57■□□□□ 0.08
LAMB1-210ENST00000474380 RAD54L2Q9Y4B4 1467 aa15.55■□□□□ 0.08
LAMB1-210ENST00000474380 KIF27Q86VH2 1401 aa15.54■□□□□ 0.08
LAMB1-210ENST00000474380 LOC105371045A0A1W2PR82 267 aa15.52■□□□□ 0.08
LAMB1-210ENST00000474380 ABCA10Q8WWZ4 1543 aa15.51■□□□□ 0.07
LAMB1-210ENST00000474380 OSCARQ8IYS5 282 aa15.49■□□□□ 0.07
LAMB1-210ENST00000474380 IFT140Q96RY7 1462 aa15.47■□□□□ 0.07
LAMB1-210ENST00000474380 EHMT2Q96KQ7 1210 aa15.46■□□□□ 0.07
LAMB1-210ENST00000474380 TARBP1Q13395 1621 aaKnown RBP15.45■□□□□ 0.06
LAMB1-210ENST00000474380 TDRD9Q8NDG6 1382 aaKnown RBP15.44■□□□□ 0.06
LAMB1-210ENST00000474380 IGF1RP08069 1367 aa15.42■□□□□ 0.06
LAMB1-210ENST00000474380 WDR97A6NE52 1622 aa15.42■□□□□ 0.06
LAMB1-210ENST00000474380 GAPVD1Q14C86 1478 aa15.4■□□□□ 0.06
LAMB1-210ENST00000474380 UBTFP17480 764 aaKnown RBP15.37■□□□□ 0.05
LAMB1-210ENST00000474380 AQRO60306 1485 aaKnown RBP eCLIP15.37■□□□□ 0.05
LAMB1-210ENST00000474380 ABCA5Q8WWZ7 1642 aa15.36■□□□□ 0.05
LAMB1-210ENST00000474380 ZNF608Q9ULD9 1512 aaPredicted RBP15.36■□□□□ 0.05
LAMB1-210ENST00000474380 CARMIL1Q5VZK9 1371 aa15.36■□□□□ 0.05
LAMB1-210ENST00000474380 KIF21BO75037 1637 aa15.35■□□□□ 0.05
LAMB1-210ENST00000474380 PRXQ9BXM0 1461 aa15.34■□□□□ 0.05
LAMB1-210ENST00000474380 FBLN2P98095 1184 aa15.34■□□□□ 0.05
LAMB1-210ENST00000474380 GOLGA3Q08378 1498 aa15.33■□□□□ 0.05
LAMB1-210ENST00000474380 ERICH3Q5RHP9 1530 aa15.33■□□□□ 0.04
LAMB1-210ENST00000474380 GRIN2BQ13224 1484 aa15.31■□□□□ 0.04
LAMB1-210ENST00000474380 RAPGEF2Q9Y4G8 1499 aa15.3■□□□□ 0.04
LAMB1-210ENST00000474380 CUL7Q14999 1698 aa15.28■□□□□ 0.04
LAMB1-210ENST00000474380 TNIKQ9UKE5 1360 aa15.28■□□□□ 0.04
LAMB1-210ENST00000474380 PBRM1Q86U86 1689 aa15.28■□□□□ 0.04
LAMB1-210ENST00000474380 EIF4G3O43432 1585 aaKnown RBP15.28■□□□□ 0.04
LAMB1-210ENST00000474380 CHMP7Q8WUX9 453 aaPredicted RBP15.25■□□□□ 0.03
LAMB1-210ENST00000474380 FHAD1B1AJZ9 1412 aa15.24■□□□□ 0.03
LAMB1-210ENST00000474380 SNAPC4Q5SXM2 1469 aa15.2■□□□□ 0.02
LAMB1-210ENST00000474380 MAGI1Q96QZ7 1491 aaPredicted RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms