RNA–Protein interactions for RNA: ENST00000474377.5

SSR2-208, Transcript of signal sequence receptor subunit 2, humanhuman

TSL 5

Gene SSR2, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2-208ENST00000474377 NISCHQ9Y2I1 1504 aa21.2■□□□□ 0.98
SSR2-208ENST00000474377 CHIC1Q5VXU3 224 aa19.85■□□□□ 0.77
SSR2-208ENST00000474377 AEBP2Q6ZN18 517 aaPredicted RBP19.75■□□□□ 0.75
SSR2-208ENST00000474377 CCDC180Q9P1Z9 1646 aa18.92■□□□□ 0.62
SSR2-208ENST00000474377 ABCC9O60706 1549 aa18.67■□□□□ 0.58
SSR2-208ENST00000474377 RB1CC1Q8TDY2 1594 aa17.97■□□□□ 0.47
SSR2-208ENST00000474377 NACADO15069 1562 aa17.87■□□□□ 0.45
SSR2-208ENST00000474377 DCAF8L2P0C7V8 631 aa17.84■□□□□ 0.45
SSR2-208ENST00000474377 MYO15BQ96JP2 1530 aa17.75■□□□□ 0.43
SSR2-208ENST00000474377 ZCCHC6Q5VYS8 1495 aaKnown RBP17.63■□□□□ 0.41
SSR2-208ENST00000474377 DCAF1Q9Y4B6 1507 aa17.59■□□□□ 0.41
SSR2-208ENST00000474377 PHF23Q9BUL5 403 aaPredicted RBP17.5■□□□□ 0.39
SSR2-208ENST00000474377 UNC13AQ9UPW8 1703 aa17.44■□□□□ 0.38
SSR2-208ENST00000474377 PABPN1Q86U42 306 aaKnown RBP eCLIP17.36■□□□□ 0.37
SSR2-208ENST00000474377 SHROOM4Q9ULL8 1493 aa17.35■□□□□ 0.37
SSR2-208ENST00000474377 DNAJC5BQ9UF47 199 aa17.31■□□□□ 0.36
SSR2-208ENST00000474377 SCRIBQ14160 1630 aa17.27■□□□□ 0.36
SSR2-208ENST00000474377 BICRAQ9NZM4 1560 aa17.27■□□□□ 0.35
SSR2-208ENST00000474377 CC2D2AQ9P2K1 1620 aa16.95■□□□□ 0.3
SSR2-208ENST00000474377 CECR2Q9BXF3 1484 aa16.92■□□□□ 0.3
SSR2-208ENST00000474377 EIF4G1Q04637 1599 aaKnown RBP16.91■□□□□ 0.3
SSR2-208ENST00000474377 SENP3Q9H4L4 574 aaPredicted RBP16.72■□□□□ 0.27
SSR2-208ENST00000474377 BAZ1AQ9NRL2 1556 aaPredicted RBP16.48■□□□□ 0.23
SSR2-208ENST00000474377 NCAPD3P42695 1498 aa16.48■□□□□ 0.23
SSR2-208ENST00000474377 SMARCA4P51532 1647 aa16.46■□□□□ 0.23
SSR2-208ENST00000474377 SMARCA2P51531 1590 aa16.46■□□□□ 0.23
SSR2-208ENST00000474377 ATAD2BQ9ULI0 1458 aa16.43■□□□□ 0.22
SSR2-208ENST00000474377 PLPPR3Q6T4P5 718 aa16.43■□□□□ 0.22
SSR2-208ENST00000474377 HMGXB3Q12766 1538 aa16.39■□□□□ 0.21
SSR2-208ENST00000474377 CUX2O14529 1486 aa16.35■□□□□ 0.21
SSR2-208ENST00000474377 PEG3Q9GZU2 1588 aa16.34■□□□□ 0.21
SSR2-208ENST00000474377 ERCC6Q03468 1493 aa16.32■□□□□ 0.2
SSR2-208ENST00000474377 BAZ1BQ9UIG0 1483 aaKnown RBP16.32■□□□□ 0.2
SSR2-208ENST00000474377 MROH2BQ7Z745 1585 aa16.29■□□□□ 0.2
SSR2-208ENST00000474377 DNAJC5Q9H3Z4 198 aa16.22■□□□□ 0.19
SSR2-208ENST00000474377 WIZO95785 1651 aa16.16■□□□□ 0.18
SSR2-208ENST00000474377 LAMC3Q9Y6N6 1575 aa16.11■□□□□ 0.17
SSR2-208ENST00000474377 RSF1Q96T23 1441 aaPredicted RBP16.09■□□□□ 0.17
SSR2-208ENST00000474377 NESP48681 1621 aa16.02■□□□□ 0.16
SSR2-208ENST00000474377 PDS5BQ9NTI5 1447 aa16.01■□□□□ 0.15
SSR2-208ENST00000474377 CADPSQ9ULU8 1353 aa16■□□□□ 0.15
SSR2-208ENST00000474377 TOP2AP11388 1531 aaKnown RBP15.98■□□□□ 0.15
SSR2-208ENST00000474377 THOC2Q8NI27 1593 aaKnown RBP15.96■□□□□ 0.15
SSR2-208ENST00000474377 KIF21AQ7Z4S6 1674 aa15.89■□□□□ 0.13
SSR2-208ENST00000474377 CFTRP13569 1480 aa15.85■□□□□ 0.13
SSR2-208ENST00000474377 MRC2Q9UBG0 1479 aa15.82■□□□□ 0.12
SSR2-208ENST00000474377 CEP164Q9UPV0 1460 aa15.81■□□□□ 0.12
SSR2-208ENST00000474377 FANCD2Q9BXW9 1451 aa15.79■□□□□ 0.12
SSR2-208ENST00000474377 WDR62O43379 1518 aa15.77■□□□□ 0.11
SSR2-208ENST00000474377 CCDC88BA6NC98 1476 aa15.76■□□□□ 0.11
SSR2-208ENST00000474377 SUPT5HO00267 1087 aaKnown RBP15.73■□□□□ 0.11
SSR2-208ENST00000474377 PRDM2Q13029 1718 aa15.71■□□□□ 0.11
SSR2-208ENST00000474377 URB2Q14146 1524 aaKnown RBP15.59■□□□□ 0.09
SSR2-208ENST00000474377 ABCC8Q09428 1581 aa15.58■□□□□ 0.09
SSR2-208ENST00000474377 TOPBP1Q92547 1522 aa15.5■□□□□ 0.07
SSR2-208ENST00000474377 IFT140Q96RY7 1462 aa15.49■□□□□ 0.07
SSR2-208ENST00000474377 OSCARQ8IYS5 282 aa15.49■□□□□ 0.07
SSR2-208ENST00000474377 DNMBPQ6XZF7 1577 aa15.49■□□□□ 0.07
SSR2-208ENST00000474377 TRIM41Q8WV44 630 aa15.47■□□□□ 0.07
SSR2-208ENST00000474377 FOXD1Q16676 465 aa15.43■□□□□ 0.06
SSR2-208ENST00000474377 ADRA2BP18089 450 aa15.38■□□□□ 0.05
SSR2-208ENST00000474377 POLA1P09884 1462 aaPredicted RBP15.36■□□□□ 0.05
SSR2-208ENST00000474377 ZNF608Q9ULD9 1512 aaPredicted RBP15.34■□□□□ 0.05
SSR2-208ENST00000474377 SOGA1O94964 1423 aa15.32■□□□□ 0.04
SSR2-208ENST00000474377 WDR97A6NE52 1622 aa15.31■□□□□ 0.04
SSR2-208ENST00000474377 TARBP1Q13395 1621 aaKnown RBP15.31■□□□□ 0.04
SSR2-208ENST00000474377 EIF4G3O43432 1585 aaKnown RBP15.3■□□□□ 0.04
SSR2-208ENST00000474377 CUX1P39880 1505 aa15.3■□□□□ 0.04
SSR2-208ENST00000474377 FGD5Q6ZNL6 1462 aa15.3■□□□□ 0.04
SSR2-208ENST00000474377 PPP6R1Q9UPN7 881 aa15.29■□□□□ 0.04
SSR2-208ENST00000474377 RIMBP3CA6NJZ7 1639 aa15.27■□□□□ 0.03
SSR2-208ENST00000474377 RIMBP3BA6NNM3 1639 aa15.27■□□□□ 0.03
SSR2-208ENST00000474377 RIMBP3Q9UFD9 1639 aa15.27■□□□□ 0.03
SSR2-208ENST00000474377 AQRO60306 1485 aaKnown RBP eCLIP15.26■□□□□ 0.03
SSR2-208ENST00000474377 RAD54L2Q9Y4B4 1467 aa15.26■□□□□ 0.03
SSR2-208ENST00000474377 WRNQ14191 1432 aaPredicted RBP eCLIP15.22■□□□□ 0.03
SSR2-208ENST00000474377 TDRD9Q8NDG6 1382 aaKnown RBP15.22■□□□□ 0.03
SSR2-208ENST00000474377 ARHGEF11O15085 1522 aa15.22■□□□□ 0.03
SSR2-208ENST00000474377 CHD1O14646 1710 aa15.21■□□□□ 0.03
SSR2-208ENST00000474377 GRIN2BQ13224 1484 aa15.18■□□□□ 0.02
SSR2-208ENST00000474377 ABCA10Q8WWZ4 1543 aa15.17■□□□□ 0.02
SSR2-208ENST00000474377 MAGI1Q96QZ7 1491 aaPredicted RBP15.17■□□□□ 0.02
SSR2-208ENST00000474377 TOP2BQ02880 1626 aa15.17■□□□□ 0.02
SSR2-208ENST00000474377 SYNJ1O43426 1573 aa15.15■□□□□ 0.02
SSR2-208ENST00000474377 FBLN2P98095 1184 aa15.15■□□□□ 0.02
SSR2-208ENST00000474377 GAPVD1Q14C86 1478 aa15.14■□□□□ 0.01
SSR2-208ENST00000474377 BIVM-ERCC5R4GMW8 1640 aa15.14■□□□□ 0.01
SSR2-208ENST00000474377 SNAPC4Q5SXM2 1469 aa15.14■□□□□ 0.01
SSR2-208ENST00000474377 CHMP7Q8WUX9 453 aaPredicted RBP15.12■□□□□ 0.01
SSR2-208ENST00000474377 PBRM1Q86U86 1689 aa15.12■□□□□ 0.01
SSR2-208ENST00000474377 SYNJ2O15056 1496 aa15.09■□□□□ 0.01
SSR2-208ENST00000474377 ABCA5Q8WWZ7 1642 aa15.08■□□□□ 0
SSR2-208ENST00000474377 CYB5RLQ6IPT4 315 aa15.02■□□□□ -0
SSR2-208ENST00000474377 ERICH3Q5RHP9 1530 aa15.01□□□□□ -0.01
SSR2-208ENST00000474377 ARAP1Q96P48 1450 aa15.01□□□□□ -0.01
SSR2-208ENST00000474377 CLASP1Q7Z460 1538 aa14.99□□□□□ -0.01
SSR2-208ENST00000474377 FHAD1B1AJZ9 1412 aa14.99□□□□□ -0.01
SSR2-208ENST00000474377 TRHP20396 242 aaPredicted RBP14.98□□□□□ -0.01
SSR2-208ENST00000474377 GRIN2AQ12879 1464 aa14.96□□□□□ -0.01
SSR2-208ENST00000474377 ADAMTS12P58397 1594 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms