RNA–Protein interactions for RNA: ENST00000474348.5

RNF13-212, Transcript of ring finger protein 13, humanhuman

TSL 5

Gene RNF13, Length 1,027 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13-212ENST00000474348 NISCHQ9Y2I1 1504 aa22.76■■□□□ 1.23
RNF13-212ENST00000474348 ABCC9O60706 1549 aa20.96■□□□□ 0.95
RNF13-212ENST00000474348 CCDC180Q9P1Z9 1646 aa20.4■□□□□ 0.86
RNF13-212ENST00000474348 DNAJC5BQ9UF47 199 aa20.09■□□□□ 0.81
RNF13-212ENST00000474348 AEBP2Q6ZN18 517 aaPredicted RBP19.78■□□□□ 0.76
RNF13-212ENST00000474348 RB1CC1Q8TDY2 1594 aa19.72■□□□□ 0.75
RNF13-212ENST00000474348 DCAF8L2P0C7V8 631 aa19.67■□□□□ 0.74
RNF13-212ENST00000474348 PABPN1Q86U42 306 aaKnown RBP eCLIP19.6■□□□□ 0.73
RNF13-212ENST00000474348 NACADO15069 1562 aa19.51■□□□□ 0.71
RNF13-212ENST00000474348 MYO15BQ96JP2 1530 aa19.12■□□□□ 0.65
RNF13-212ENST00000474348 BICRAQ9NZM4 1560 aa19.1■□□□□ 0.65
RNF13-212ENST00000474348 UNC13AQ9UPW8 1703 aa19.05■□□□□ 0.64
RNF13-212ENST00000474348 CECR2Q9BXF3 1484 aa18.93■□□□□ 0.62
RNF13-212ENST00000474348 CHIC1Q5VXU3 224 aa18.9■□□□□ 0.62
RNF13-212ENST00000474348 SHROOM4Q9ULL8 1493 aa18.84■□□□□ 0.61
RNF13-212ENST00000474348 CC2D2AQ9P2K1 1620 aa18.82■□□□□ 0.6
RNF13-212ENST00000474348 DNAJC5Q9H3Z4 198 aa18.75■□□□□ 0.59
RNF13-212ENST00000474348 DCAF1Q9Y4B6 1507 aa18.74■□□□□ 0.59
RNF13-212ENST00000474348 ZCCHC6Q5VYS8 1495 aaKnown RBP18.72■□□□□ 0.59
RNF13-212ENST00000474348 EIF4G1Q04637 1599 aaKnown RBP18.7■□□□□ 0.58
RNF13-212ENST00000474348 SCRIBQ14160 1630 aa18.65■□□□□ 0.58
RNF13-212ENST00000474348 CUX2O14529 1486 aa18.18■□□□□ 0.5
RNF13-212ENST00000474348 ERCC6Q03468 1493 aa18.15■□□□□ 0.5
RNF13-212ENST00000474348 NCAPD3P42695 1498 aa18.1■□□□□ 0.49
RNF13-212ENST00000474348 ATAD2BQ9ULI0 1458 aa17.96■□□□□ 0.47
RNF13-212ENST00000474348 NESP48681 1621 aa17.87■□□□□ 0.45
RNF13-212ENST00000474348 SMARCA2P51531 1590 aa17.86■□□□□ 0.45
RNF13-212ENST00000474348 TRIM41Q8WV44 630 aa17.8■□□□□ 0.44
RNF13-212ENST00000474348 HMGXB3Q12766 1538 aa17.8■□□□□ 0.44
RNF13-212ENST00000474348 BAZ1BQ9UIG0 1483 aaKnown RBP17.76■□□□□ 0.43
RNF13-212ENST00000474348 SMARCA4P51532 1647 aa17.74■□□□□ 0.43
RNF13-212ENST00000474348 PDS5BQ9NTI5 1447 aa17.7■□□□□ 0.42
RNF13-212ENST00000474348 BAZ1AQ9NRL2 1556 aaPredicted RBP17.67■□□□□ 0.42
RNF13-212ENST00000474348 LAMC3Q9Y6N6 1575 aa17.64■□□□□ 0.41
RNF13-212ENST00000474348 THOC2Q8NI27 1593 aaKnown RBP17.62■□□□□ 0.41
RNF13-212ENST00000474348 CADPSQ9ULU8 1353 aa17.58■□□□□ 0.4
RNF13-212ENST00000474348 PEG3Q9GZU2 1588 aa17.57■□□□□ 0.4
RNF13-212ENST00000474348 MROH2BQ7Z745 1585 aa17.53■□□□□ 0.4
RNF13-212ENST00000474348 OSCARQ8IYS5 282 aa17.51■□□□□ 0.39
RNF13-212ENST00000474348 MRC2Q9UBG0 1479 aa17.48■□□□□ 0.39
RNF13-212ENST00000474348 KIF21AQ7Z4S6 1674 aa17.47■□□□□ 0.39
RNF13-212ENST00000474348 WDR62O43379 1518 aa17.37■□□□□ 0.37
RNF13-212ENST00000474348 CEP164Q9UPV0 1460 aa17.34■□□□□ 0.37
RNF13-212ENST00000474348 FANCD2Q9BXW9 1451 aa17.31■□□□□ 0.36
RNF13-212ENST00000474348 CFTRP13569 1480 aa17.24■□□□□ 0.35
RNF13-212ENST00000474348 WIZO95785 1651 aa17.23■□□□□ 0.35
RNF13-212ENST00000474348 URB2Q14146 1524 aaKnown RBP17.15■□□□□ 0.34
RNF13-212ENST00000474348 CYB5RLQ6IPT4 315 aa17.12■□□□□ 0.33
RNF13-212ENST00000474348 RSF1Q96T23 1441 aaPredicted RBP17.11■□□□□ 0.33
RNF13-212ENST00000474348 TRHP20396 242 aaPredicted RBP17.07■□□□□ 0.32
RNF13-212ENST00000474348 IFT140Q96RY7 1462 aa17.03■□□□□ 0.32
RNF13-212ENST00000474348 RIMBP3CA6NJZ7 1639 aa17.03■□□□□ 0.32
RNF13-212ENST00000474348 RIMBP3BA6NNM3 1639 aa17.03■□□□□ 0.32
RNF13-212ENST00000474348 RIMBP3Q9UFD9 1639 aa17.03■□□□□ 0.32
RNF13-212ENST00000474348 ZNF608Q9ULD9 1512 aaPredicted RBP17.02■□□□□ 0.32
RNF13-212ENST00000474348 TOP2AP11388 1531 aaKnown RBP17.01■□□□□ 0.31
RNF13-212ENST00000474348 FBLN2P98095 1184 aa17■□□□□ 0.31
RNF13-212ENST00000474348 ARHGEF11O15085 1522 aa17■□□□□ 0.31
RNF13-212ENST00000474348 CCDC88BA6NC98 1476 aa16.93■□□□□ 0.3
RNF13-212ENST00000474348 ABCC8Q09428 1581 aa16.91■□□□□ 0.3
RNF13-212ENST00000474348 TOPBP1Q92547 1522 aa16.91■□□□□ 0.3
RNF13-212ENST00000474348 AQRO60306 1485 aaKnown RBP eCLIP16.89■□□□□ 0.29
RNF13-212ENST00000474348 SENP3Q9H4L4 574 aaPredicted RBP16.83■□□□□ 0.28
RNF13-212ENST00000474348 ARAP1Q96P48 1450 aa16.8■□□□□ 0.28
RNF13-212ENST00000474348 CHMP7Q8WUX9 453 aaPredicted RBP16.8■□□□□ 0.28
RNF13-212ENST00000474348 EIF4G3O43432 1585 aaKnown RBP16.78■□□□□ 0.28
RNF13-212ENST00000474348 TDRD9Q8NDG6 1382 aaKnown RBP16.77■□□□□ 0.28
RNF13-212ENST00000474348 DNMBPQ6XZF7 1577 aa16.77■□□□□ 0.27
RNF13-212ENST00000474348 SOGA1O94964 1423 aa16.75■□□□□ 0.27
RNF13-212ENST00000474348 PRDM2Q13029 1718 aa16.73■□□□□ 0.27
RNF13-212ENST00000474348 POLA1P09884 1462 aaPredicted RBP16.72■□□□□ 0.27
RNF13-212ENST00000474348 RAD54L2Q9Y4B4 1467 aa16.71■□□□□ 0.27
RNF13-212ENST00000474348 TARBP1Q13395 1621 aaKnown RBP16.7■□□□□ 0.26
RNF13-212ENST00000474348 CHD1O14646 1710 aa16.67■□□□□ 0.26
RNF13-212ENST00000474348 PHF23Q9BUL5 403 aaPredicted RBP16.65■□□□□ 0.26
RNF13-212ENST00000474348 SNAPC4Q5SXM2 1469 aa16.62■□□□□ 0.25
RNF13-212ENST00000474348 GRIN2BQ13224 1484 aa16.58■□□□□ 0.24
RNF13-212ENST00000474348 MAGI1Q96QZ7 1491 aaPredicted RBP16.57■□□□□ 0.24
RNF13-212ENST00000474348 SYNJ1O43426 1573 aa16.56■□□□□ 0.24
RNF13-212ENST00000474348 FGD5Q6ZNL6 1462 aa16.56■□□□□ 0.24
RNF13-212ENST00000474348 CLASP1Q7Z460 1538 aa16.55■□□□□ 0.24
RNF13-212ENST00000474348 SYNJ2O15056 1496 aa16.54■□□□□ 0.24
RNF13-212ENST00000474348 GAPVD1Q14C86 1478 aa16.53■□□□□ 0.24
RNF13-212ENST00000474348 WDR97A6NE52 1622 aa16.5■□□□□ 0.23
RNF13-212ENST00000474348 CUX1P39880 1505 aa16.46■□□□□ 0.23
RNF13-212ENST00000474348 ABCA10Q8WWZ4 1543 aa16.35■□□□□ 0.21
RNF13-212ENST00000474348 GRIN2AQ12879 1464 aa16.33■□□□□ 0.2
RNF13-212ENST00000474348 NPM1P06748 294 aaKnown RBP eCLIP16.32■□□□□ 0.2
RNF13-212ENST00000474348 WRNQ14191 1432 aaPredicted RBP eCLIP16.32■□□□□ 0.2
RNF13-212ENST00000474348 JPH4Q96JJ6 628 aa16.31■□□□□ 0.2
RNF13-212ENST00000474348 ERCC6L2Q5T890 1561 aa16.3■□□□□ 0.2
RNF13-212ENST00000474348 FAM69CQ0P6D2 419 aa16.29■□□□□ 0.2
RNF13-212ENST00000474348 NUP160Q12769 1436 aa16.28■□□□□ 0.2
RNF13-212ENST00000474348 SUPT5HO00267 1087 aaKnown RBP16.27■□□□□ 0.2
RNF13-212ENST00000474348 PBRM1Q86U86 1689 aa16.27■□□□□ 0.19
RNF13-212ENST00000474348 FHAD1B1AJZ9 1412 aa16.27■□□□□ 0.19
RNF13-212ENST00000474348 CEP170Q5SW79 1584 aa16.26■□□□□ 0.19
RNF13-212ENST00000474348 PRG4Q92954 1404 aaPredicted RBP16.25■□□□□ 0.19
RNF13-212ENST00000474348 ABCA5Q8WWZ7 1642 aa16.24■□□□□ 0.19
RNF13-212ENST00000474348 ADAMTS12P58397 1594 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms