RNA–Protein interactions for RNA: ENST00000474288.1

HUWE1-209, Transcript of HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene HUWE1, Length 1,254 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HUWE1-209ENST00000474288 NISCHQ9Y2I1 1504 aa25.02■■□□□ 1.6
HUWE1-209ENST00000474288 CCDC180Q9P1Z9 1646 aa22.06■■□□□ 1.12
HUWE1-209ENST00000474288 ZCCHC6Q5VYS8 1495 aaKnown RBP21■□□□□ 0.95
HUWE1-209ENST00000474288 ABCC9O60706 1549 aa20.88■□□□□ 0.93
HUWE1-209ENST00000474288 DCAF1Q9Y4B6 1507 aa20.82■□□□□ 0.92
HUWE1-209ENST00000474288 MYO15BQ96JP2 1530 aa20.73■□□□□ 0.91
HUWE1-209ENST00000474288 NACADO15069 1562 aa20.57■□□□□ 0.88
HUWE1-209ENST00000474288 RB1CC1Q8TDY2 1594 aa20.42■□□□□ 0.86
HUWE1-209ENST00000474288 DCAF8L2P0C7V8 631 aa20.37■□□□□ 0.85
HUWE1-209ENST00000474288 SCRIBQ14160 1630 aa20.04■□□□□ 0.8
HUWE1-209ENST00000474288 UNC13AQ9UPW8 1703 aa20■□□□□ 0.79
HUWE1-209ENST00000474288 SHROOM4Q9ULL8 1493 aa19.88■□□□□ 0.77
HUWE1-209ENST00000474288 BICRAQ9NZM4 1560 aa19.84■□□□□ 0.77
HUWE1-209ENST00000474288 PABPN1Q86U42 306 aaKnown RBP eCLIP19.54■□□□□ 0.72
HUWE1-209ENST00000474288 CECR2Q9BXF3 1484 aa19.38■□□□□ 0.69
HUWE1-209ENST00000474288 BAZ1AQ9NRL2 1556 aaPredicted RBP19.35■□□□□ 0.69
HUWE1-209ENST00000474288 SMARCA4P51532 1647 aa19.3■□□□□ 0.68
HUWE1-209ENST00000474288 MROH2BQ7Z745 1585 aa19.27■□□□□ 0.67
HUWE1-209ENST00000474288 RSF1Q96T23 1441 aaPredicted RBP19.25■□□□□ 0.67
HUWE1-209ENST00000474288 EIF4G1Q04637 1599 aaKnown RBP19.23■□□□□ 0.67
HUWE1-209ENST00000474288 PEG3Q9GZU2 1588 aa19.19■□□□□ 0.66
HUWE1-209ENST00000474288 WIZO95785 1651 aa19.06■□□□□ 0.64
HUWE1-209ENST00000474288 SMARCA2P51531 1590 aa19.06■□□□□ 0.64
HUWE1-209ENST00000474288 ATAD2BQ9ULI0 1458 aa19.04■□□□□ 0.64
HUWE1-209ENST00000474288 CC2D2AQ9P2K1 1620 aa18.99■□□□□ 0.63
HUWE1-209ENST00000474288 NCAPD3P42695 1498 aa18.98■□□□□ 0.63
HUWE1-209ENST00000474288 HMGXB3Q12766 1538 aa18.96■□□□□ 0.63
HUWE1-209ENST00000474288 SUPT5HO00267 1087 aaKnown RBP18.96■□□□□ 0.63
HUWE1-209ENST00000474288 TOP2AP11388 1531 aaKnown RBP18.95■□□□□ 0.62
HUWE1-209ENST00000474288 BAZ1BQ9UIG0 1483 aaKnown RBP18.87■□□□□ 0.61
HUWE1-209ENST00000474288 DNAJC5BQ9UF47 199 aa18.68■□□□□ 0.58
HUWE1-209ENST00000474288 CCDC88BA6NC98 1476 aa18.68■□□□□ 0.58
HUWE1-209ENST00000474288 CFTRP13569 1480 aa18.46■□□□□ 0.54
HUWE1-209ENST00000474288 CADPSQ9ULU8 1353 aa18.41■□□□□ 0.54
HUWE1-209ENST00000474288 PRDM2Q13029 1718 aa18.39■□□□□ 0.53
HUWE1-209ENST00000474288 LAMC3Q9Y6N6 1575 aa18.38■□□□□ 0.53
HUWE1-209ENST00000474288 NESP48681 1621 aa18.26■□□□□ 0.51
HUWE1-209ENST00000474288 PDS5BQ9NTI5 1447 aa18.18■□□□□ 0.5
HUWE1-209ENST00000474288 FANCD2Q9BXW9 1451 aa18.17■□□□□ 0.5
HUWE1-209ENST00000474288 CHIC1Q5VXU3 224 aa18.13■□□□□ 0.49
HUWE1-209ENST00000474288 ABCC8Q09428 1581 aa18.13■□□□□ 0.49
HUWE1-209ENST00000474288 KIF21AQ7Z4S6 1674 aa18.1■□□□□ 0.49
HUWE1-209ENST00000474288 CEP164Q9UPV0 1460 aa18.1■□□□□ 0.49
HUWE1-209ENST00000474288 WRNQ14191 1432 aaPredicted RBP eCLIP18.1■□□□□ 0.49
HUWE1-209ENST00000474288 BIVM-ERCC5R4GMW8 1640 aa18.07■□□□□ 0.48
HUWE1-209ENST00000474288 TOP2BQ02880 1626 aa18.06■□□□□ 0.48
HUWE1-209ENST00000474288 SYNJ1O43426 1573 aa18.06■□□□□ 0.48
HUWE1-209ENST00000474288 CUX1P39880 1505 aa18.04■□□□□ 0.48
HUWE1-209ENST00000474288 DNMBPQ6XZF7 1577 aa18.02■□□□□ 0.48
HUWE1-209ENST00000474288 URB2Q14146 1524 aaKnown RBP17.99■□□□□ 0.47
HUWE1-209ENST00000474288 MRC2Q9UBG0 1479 aa17.98■□□□□ 0.47
HUWE1-209ENST00000474288 TOPBP1Q92547 1522 aa17.97■□□□□ 0.47
HUWE1-209ENST00000474288 THOC2Q8NI27 1593 aaKnown RBP17.96■□□□□ 0.47
HUWE1-209ENST00000474288 WDR62O43379 1518 aa17.96■□□□□ 0.47
HUWE1-209ENST00000474288 ERCC6Q03468 1493 aa17.94■□□□□ 0.46
HUWE1-209ENST00000474288 TRIM41Q8WV44 630 aa17.93■□□□□ 0.46
HUWE1-209ENST00000474288 FGD5Q6ZNL6 1462 aa17.87■□□□□ 0.45
HUWE1-209ENST00000474288 POLA1P09884 1462 aaPredicted RBP17.86■□□□□ 0.45
HUWE1-209ENST00000474288 AEBP2Q6ZN18 517 aaPredicted RBP17.84■□□□□ 0.45
HUWE1-209ENST00000474288 WDR97A6NE52 1622 aa17.79■□□□□ 0.44
HUWE1-209ENST00000474288 ABCA10Q8WWZ4 1543 aa17.78■□□□□ 0.44
HUWE1-209ENST00000474288 CUX2O14529 1486 aa17.78■□□□□ 0.44
HUWE1-209ENST00000474288 TARBP1Q13395 1621 aaKnown RBP17.78■□□□□ 0.44
HUWE1-209ENST00000474288 EEA1Q15075 1411 aa17.75■□□□□ 0.43
HUWE1-209ENST00000474288 SOGA1O94964 1423 aa17.73■□□□□ 0.43
HUWE1-209ENST00000474288 IFT140Q96RY7 1462 aa17.73■□□□□ 0.43
HUWE1-209ENST00000474288 RAD54L2Q9Y4B4 1467 aa17.72■□□□□ 0.43
HUWE1-209ENST00000474288 ABCA5Q8WWZ7 1642 aa17.69■□□□□ 0.42
HUWE1-209ENST00000474288 KIF27Q86VH2 1401 aa17.67■□□□□ 0.42
HUWE1-209ENST00000474288 RUSC2Q8N2Y8 1516 aa17.66■□□□□ 0.42
HUWE1-209ENST00000474288 ERICH3Q5RHP9 1530 aa17.57■□□□□ 0.4
HUWE1-209ENST00000474288 ZNF608Q9ULD9 1512 aaPredicted RBP17.57■□□□□ 0.4
HUWE1-209ENST00000474288 GAPVD1Q14C86 1478 aa17.56■□□□□ 0.4
HUWE1-209ENST00000474288 EIF4G3O43432 1585 aaKnown RBP17.56■□□□□ 0.4
HUWE1-209ENST00000474288 KIF21BO75037 1637 aa17.54■□□□□ 0.4
HUWE1-209ENST00000474288 IGF1RP08069 1367 aa17.54■□□□□ 0.4
HUWE1-209ENST00000474288 CSRNP3Q8WYN3 585 aa17.54■□□□□ 0.4
HUWE1-209ENST00000474288 PRXQ9BXM0 1461 aa17.54■□□□□ 0.4
HUWE1-209ENST00000474288 TDRD9Q8NDG6 1382 aaKnown RBP17.53■□□□□ 0.4
HUWE1-209ENST00000474288 PBRM1Q86U86 1689 aa17.53■□□□□ 0.4
HUWE1-209ENST00000474288 CUL7Q14999 1698 aa17.52■□□□□ 0.39
HUWE1-209ENST00000474288 AQRO60306 1485 aaKnown RBP eCLIP17.51■□□□□ 0.391e-7■■■■□ 25.2
HUWE1-209ENST00000474288 GRIN2BQ13224 1484 aa17.5■□□□□ 0.39
HUWE1-209ENST00000474288 FAM9AQ8IZU1 332 aaPredicted RBP17.46■□□□□ 0.39
HUWE1-209ENST00000474288 ADAMTS12P58397 1594 aa17.45■□□□□ 0.38
HUWE1-209ENST00000474288 MAGI1Q96QZ7 1491 aaPredicted RBP17.44■□□□□ 0.38
HUWE1-209ENST00000474288 GOLGA3Q08378 1498 aa17.43■□□□□ 0.38
HUWE1-209ENST00000474288 CARMIL1Q5VZK9 1371 aa17.42■□□□□ 0.38
HUWE1-209ENST00000474288 RAPGEF2Q9Y4G8 1499 aa17.41■□□□□ 0.38
HUWE1-209ENST00000474288 FHAD1B1AJZ9 1412 aa17.4■□□□□ 0.38
HUWE1-209ENST00000474288 SNAPC4Q5SXM2 1469 aa17.39■□□□□ 0.37
HUWE1-209ENST00000474288 SYNJ2O15056 1496 aa17.34■□□□□ 0.37
HUWE1-209ENST00000474288 TNIKQ9UKE5 1360 aa17.32■□□□□ 0.36
HUWE1-209ENST00000474288 LOC105371045A0A1W2PR82 267 aa17.3■□□□□ 0.36
HUWE1-209ENST00000474288 GRIN2AQ12879 1464 aa17.3■□□□□ 0.36
HUWE1-209ENST00000474288 CTTNBP2Q8WZ74 1663 aa17.24■□□□□ 0.35
HUWE1-209ENST00000474288 NUP160Q12769 1436 aa17.23■□□□□ 0.35
HUWE1-209ENST00000474288 CHD1O14646 1710 aa17.21■□□□□ 0.35
HUWE1-209ENST00000474288 CEP170Q5SW79 1584 aa17.19■□□□□ 0.34
HUWE1-209ENST00000474288 KIAA0586Q9BVV6 1533 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms