RNA–Protein interactions for RNA: ENST00000474153.1

UBE3C-206, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2

Gene UBE3C, Length 450 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-206ENST00000474153 NISCHQ9Y2I1 1504 aa14.96□□□□□ -0.02
UBE3C-206ENST00000474153 CCDC180Q9P1Z9 1646 aa13.5□□□□□ -0.25
UBE3C-206ENST00000474153 ABCC9O60706 1549 aa13.4□□□□□ -0.26
UBE3C-206ENST00000474153 DNAJC5BQ9UF47 199 aa12.75□□□□□ -0.37
UBE3C-206ENST00000474153 RB1CC1Q8TDY2 1594 aa12.72□□□□□ -0.37
UBE3C-206ENST00000474153 NACADO15069 1562 aa12.59□□□□□ -0.39
UBE3C-206ENST00000474153 MYO15BQ96JP2 1530 aa12.56□□□□□ -0.4
UBE3C-206ENST00000474153 UNC13AQ9UPW8 1703 aa12.51□□□□□ -0.41
UBE3C-206ENST00000474153 ZCCHC6Q5VYS8 1495 aaKnown RBP12.5□□□□□ -0.41
UBE3C-206ENST00000474153 DCAF1Q9Y4B6 1507 aa12.47□□□□□ -0.41
UBE3C-206ENST00000474153 PABPN1Q86U42 306 aaKnown RBP eCLIP12.43□□□□□ -0.42
UBE3C-206ENST00000474153 DCAF8L2P0C7V8 631 aa12.42□□□□□ -0.42
UBE3C-206ENST00000474153 BICRAQ9NZM4 1560 aa12.31□□□□□ -0.44
UBE3C-206ENST00000474153 SHROOM4Q9ULL8 1493 aa12.2□□□□□ -0.46
UBE3C-206ENST00000474153 CECR2Q9BXF3 1484 aa12.12□□□□□ -0.47
UBE3C-206ENST00000474153 SCRIBQ14160 1630 aa12.11□□□□□ -0.47
UBE3C-206ENST00000474153 CC2D2AQ9P2K1 1620 aa12.11□□□□□ -0.47
UBE3C-206ENST00000474153 EIF4G1Q04637 1599 aaKnown RBP12.05□□□□□ -0.48
UBE3C-206ENST00000474153 DNAJC5Q9H3Z4 198 aa11.93□□□□□ -0.5
UBE3C-206ENST00000474153 CUX2O14529 1486 aa11.7□□□□□ -0.54
UBE3C-206ENST00000474153 SMARCA4P51532 1647 aa11.68□□□□□ -0.54
UBE3C-206ENST00000474153 PEG3Q9GZU2 1588 aa11.63□□□□□ -0.55
UBE3C-206ENST00000474153 NCAPD3P42695 1498 aa11.62□□□□□ -0.55
UBE3C-206ENST00000474153 ERCC6Q03468 1493 aa11.62□□□□□ -0.55
UBE3C-206ENST00000474153 BAZ1AQ9NRL2 1556 aaPredicted RBP11.61□□□□□ -0.55
UBE3C-206ENST00000474153 HMGXB3Q12766 1538 aa11.56□□□□□ -0.56
UBE3C-206ENST00000474153 SMARCA2P51531 1590 aa11.55□□□□□ -0.56
UBE3C-206ENST00000474153 ATAD2BQ9ULI0 1458 aa11.52□□□□□ -0.56
UBE3C-206ENST00000474153 MROH2BQ7Z745 1585 aa11.5□□□□□ -0.57
UBE3C-206ENST00000474153 WIZO95785 1651 aa11.44□□□□□ -0.58
UBE3C-206ENST00000474153 NESP48681 1621 aa11.43□□□□□ -0.58
UBE3C-206ENST00000474153 BAZ1BQ9UIG0 1483 aaKnown RBP11.4□□□□□ -0.58
UBE3C-206ENST00000474153 THOC2Q8NI27 1593 aaKnown RBP11.39□□□□□ -0.59
UBE3C-206ENST00000474153 LAMC3Q9Y6N6 1575 aa11.39□□□□□ -0.59
UBE3C-206ENST00000474153 PDS5BQ9NTI5 1447 aa11.34□□□□□ -0.59
UBE3C-206ENST00000474153 PRDM2Q13029 1718 aa11.33□□□□□ -0.6
UBE3C-206ENST00000474153 RSF1Q96T23 1441 aaPredicted RBP11.32□□□□□ -0.6
UBE3C-206ENST00000474153 KIF21AQ7Z4S6 1674 aa11.3□□□□□ -0.6
UBE3C-206ENST00000474153 TOP2AP11388 1531 aaKnown RBP11.3□□□□□ -0.6
UBE3C-206ENST00000474153 TRIM41Q8WV44 630 aa11.27□□□□□ -0.61
UBE3C-206ENST00000474153 CADPSQ9ULU8 1353 aa11.24□□□□□ -0.61
UBE3C-206ENST00000474153 MRC2Q9UBG0 1479 aa11.22□□□□□ -0.61
UBE3C-206ENST00000474153 WDR62O43379 1518 aa11.2□□□□□ -0.62
UBE3C-206ENST00000474153 CEP164Q9UPV0 1460 aa11.14□□□□□ -0.63
UBE3C-206ENST00000474153 OSCARQ8IYS5 282 aa11.14□□□□□ -0.63
UBE3C-206ENST00000474153 CFTRP13569 1480 aa11.13□□□□□ -0.63
UBE3C-206ENST00000474153 FANCD2Q9BXW9 1451 aa11.1□□□□□ -0.63
UBE3C-206ENST00000474153 CCDC88BA6NC98 1476 aa11.08□□□□□ -0.64
UBE3C-206ENST00000474153 URB2Q14146 1524 aaKnown RBP11□□□□□ -0.65
UBE3C-206ENST00000474153 RIMBP3CA6NJZ7 1639 aa10.96□□□□□ -0.65
UBE3C-206ENST00000474153 RIMBP3BA6NNM3 1639 aa10.96□□□□□ -0.65
UBE3C-206ENST00000474153 RIMBP3Q9UFD9 1639 aa10.96□□□□□ -0.65
UBE3C-206ENST00000474153 IFT140Q96RY7 1462 aa10.93□□□□□ -0.66
UBE3C-206ENST00000474153 DNMBPQ6XZF7 1577 aa10.92□□□□□ -0.66
UBE3C-206ENST00000474153 ARHGEF11O15085 1522 aa10.92□□□□□ -0.66
UBE3C-206ENST00000474153 ZNF608Q9ULD9 1512 aaPredicted RBP10.89□□□□□ -0.67
UBE3C-206ENST00000474153 ABCC8Q09428 1581 aa10.89□□□□□ -0.67
UBE3C-206ENST00000474153 TOPBP1Q92547 1522 aa10.88□□□□□ -0.67
UBE3C-206ENST00000474153 WDR97A6NE52 1622 aa10.87□□□□□ -0.67
UBE3C-206ENST00000474153 TARBP1Q13395 1621 aaKnown RBP10.87□□□□□ -0.67
UBE3C-206ENST00000474153 CYB5RLQ6IPT4 315 aa10.85□□□□□ -0.67
UBE3C-206ENST00000474153 EIF4G3O43432 1585 aaKnown RBP10.84□□□□□ -0.67
UBE3C-206ENST00000474153 BIVM-ERCC5R4GMW8 1640 aa10.84□□□□□ -0.67
UBE3C-206ENST00000474153 TRHP20396 242 aaPredicted RBP10.81□□□□□ -0.68
UBE3C-206ENST00000474153 CUX1P39880 1505 aa10.8□□□□□ -0.68
UBE3C-206ENST00000474153 CHD1O14646 1710 aa10.8□□□□□ -0.68
UBE3C-206ENST00000474153 POLA1P09884 1462 aaPredicted RBP10.78□□□□□ -0.68
UBE3C-206ENST00000474153 ARAP1Q96P48 1450 aa10.78□□□□□ -0.68
UBE3C-206ENST00000474153 AQRO60306 1485 aaKnown RBP eCLIP10.77□□□□□ -0.697e-6■■□□□ 13.1
UBE3C-206ENST00000474153 TOP2BQ02880 1626 aa10.76□□□□□ -0.69
UBE3C-206ENST00000474153 SUPT5HO00267 1087 aaKnown RBP10.76□□□□□ -0.69
UBE3C-206ENST00000474153 FBLN2P98095 1184 aa10.76□□□□□ -0.69
UBE3C-206ENST00000474153 PBRM1Q86U86 1689 aa10.76□□□□□ -0.69
UBE3C-206ENST00000474153 FGD5Q6ZNL6 1462 aa10.74□□□□□ -0.69
UBE3C-206ENST00000474153 SYNJ1O43426 1573 aa10.73□□□□□ -0.69
UBE3C-206ENST00000474153 ABCA5Q8WWZ7 1642 aa10.73□□□□□ -0.69
UBE3C-206ENST00000474153 SOGA1O94964 1423 aa10.69□□□□□ -0.7
UBE3C-206ENST00000474153 TDRD9Q8NDG6 1382 aaKnown RBP10.68□□□□□ -0.7
UBE3C-206ENST00000474153 AEBP2Q6ZN18 517 aaPredicted RBP10.68□□□□□ -0.7
UBE3C-206ENST00000474153 CHMP7Q8WUX9 453 aaPredicted RBP10.68□□□□□ -0.7
UBE3C-206ENST00000474153 CLASP1Q7Z460 1538 aa10.68□□□□□ -0.7
UBE3C-206ENST00000474153 ABCA10Q8WWZ4 1543 aa10.68□□□□□ -0.7
UBE3C-206ENST00000474153 MAGI1Q96QZ7 1491 aaPredicted RBP10.67□□□□□ -0.7
UBE3C-206ENST00000474153 RAD54L2Q9Y4B4 1467 aa10.67□□□□□ -0.7
UBE3C-206ENST00000474153 SNAPC4Q5SXM2 1469 aa10.66□□□□□ -0.7
UBE3C-206ENST00000474153 WRNQ14191 1432 aaPredicted RBP eCLIP10.65□□□□□ -0.7
UBE3C-206ENST00000474153 GRIN2BQ13224 1484 aa10.63□□□□□ -0.71
UBE3C-206ENST00000474153 SYNJ2O15056 1496 aa10.62□□□□□ -0.71
UBE3C-206ENST00000474153 GAPVD1Q14C86 1478 aa10.59□□□□□ -0.71
UBE3C-206ENST00000474153 ADAMTS12P58397 1594 aa10.58□□□□□ -0.72
UBE3C-206ENST00000474153 ERICH3Q5RHP9 1530 aa10.58□□□□□ -0.72
UBE3C-206ENST00000474153 CUL7Q14999 1698 aa10.53□□□□□ -0.72
UBE3C-206ENST00000474153 SHROOM2Q13796 1616 aa10.5□□□□□ -0.73
UBE3C-206ENST00000474153 GRIN2AQ12879 1464 aa10.49□□□□□ -0.73
UBE3C-206ENST00000474153 CEP170Q5SW79 1584 aa10.48□□□□□ -0.73
UBE3C-206ENST00000474153 NUP160Q12769 1436 aa10.46□□□□□ -0.74
UBE3C-206ENST00000474153 ERCC6L2Q5T890 1561 aa10.45□□□□□ -0.74
UBE3C-206ENST00000474153 RUSC2Q8N2Y8 1516 aa10.45□□□□□ -0.74
UBE3C-206ENST00000474153 FHAD1B1AJZ9 1412 aa10.45□□□□□ -0.74
UBE3C-206ENST00000474153 KIF13AQ9H1H9 1805 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms