RNA–Protein interactions for RNA: ENST00000474008.1

SRCAP-204, Transcript of Snf2 related CREBBP activator protein, humanhuman

TSL 3

Gene SRCAP, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRCAP-204ENST00000474008 AEBP2Q6ZN18 517 aaPredicted RBP30.51■■■□□ 2.47
SRCAP-204ENST00000474008 CHIC1Q5VXU3 224 aa29.99■■■□□ 2.39
SRCAP-204ENST00000474008 NISCHQ9Y2I1 1504 aa29.96■■■□□ 2.39
SRCAP-204ENST00000474008 ABCC9O60706 1549 aa27.18■■□□□ 1.94
SRCAP-204ENST00000474008 CCDC180Q9P1Z9 1646 aa26.72■■□□□ 1.87
SRCAP-204ENST00000474008 PHF23Q9BUL5 403 aaPredicted RBP26.5■■□□□ 1.83
SRCAP-204ENST00000474008 DNAJC5BQ9UF47 199 aa25.8■■□□□ 1.72
SRCAP-204ENST00000474008 SENP3Q9H4L4 574 aaPredicted RBP25.66■■□□□ 1.7
SRCAP-204ENST00000474008 RB1CC1Q8TDY2 1594 aa25.58■■□□□ 1.69
SRCAP-204ENST00000474008 DCAF8L2P0C7V8 631 aa25.58■■□□□ 1.69
SRCAP-204ENST00000474008 PABPN1Q86U42 306 aaKnown RBP eCLIP25.42■■□□□ 1.66
SRCAP-204ENST00000474008 NACADO15069 1562 aa25.37■■□□□ 1.65
SRCAP-204ENST00000474008 UNC13AQ9UPW8 1703 aa25.04■■□□□ 1.6
SRCAP-204ENST00000474008 BICRAQ9NZM4 1560 aa25■■□□□ 1.59
SRCAP-204ENST00000474008 MYO15BQ96JP2 1530 aa24.93■■□□□ 1.58
SRCAP-204ENST00000474008 ZCCHC6Q5VYS8 1495 aaKnown RBP24.79■■□□□ 1.56
SRCAP-204ENST00000474008 DCAF1Q9Y4B6 1507 aa24.6■■□□□ 1.53
SRCAP-204ENST00000474008 SCRIBQ14160 1630 aa24.59■■□□□ 1.53
SRCAP-204ENST00000474008 CC2D2AQ9P2K1 1620 aa24.44■■□□□ 1.5
SRCAP-204ENST00000474008 CECR2Q9BXF3 1484 aa24.43■■□□□ 1.5
SRCAP-204ENST00000474008 PLPPR3Q6T4P5 718 aa24.4■■□□□ 1.5
SRCAP-204ENST00000474008 SHROOM4Q9ULL8 1493 aa24.36■■□□□ 1.49
SRCAP-204ENST00000474008 EIF4G1Q04637 1599 aaKnown RBP24.34■■□□□ 1.49
SRCAP-204ENST00000474008 FOXD1Q16676 465 aa23.88■■□□□ 1.41
SRCAP-204ENST00000474008 DNAJC5Q9H3Z4 198 aa23.58■■□□□ 1.37
SRCAP-204ENST00000474008 NCAPD3P42695 1498 aa23.53■■□□□ 1.36
SRCAP-204ENST00000474008 ATAD2BQ9ULI0 1458 aa23.49■■□□□ 1.35
SRCAP-204ENST00000474008 SMARCA4P51532 1647 aa23.37■■□□□ 1.33
SRCAP-204ENST00000474008 ERCC6Q03468 1493 aa23.36■■□□□ 1.33
SRCAP-204ENST00000474008 NESP48681 1621 aa23.36■■□□□ 1.33
SRCAP-204ENST00000474008 SMARCA2P51531 1590 aa23.27■■□□□ 1.32
SRCAP-204ENST00000474008 PPP6R1Q9UPN7 881 aa23.27■■□□□ 1.32
SRCAP-204ENST00000474008 CUX2O14529 1486 aa23.27■■□□□ 1.32
SRCAP-204ENST00000474008 HMGXB3Q12766 1538 aa23.25■■□□□ 1.31
SRCAP-204ENST00000474008 BAZ1BQ9UIG0 1483 aaKnown RBP23.21■■□□□ 1.31
SRCAP-204ENST00000474008 ADRA2BP18089 450 aa23.2■■□□□ 1.3
SRCAP-204ENST00000474008 MROH2BQ7Z745 1585 aa23.18■■□□□ 1.3
SRCAP-204ENST00000474008 BAZ1AQ9NRL2 1556 aaPredicted RBP23.18■■□□□ 1.3
SRCAP-204ENST00000474008 PEG3Q9GZU2 1588 aa23.07■■□□□ 1.28
SRCAP-204ENST00000474008 THOC2Q8NI27 1593 aaKnown RBP22.96■■□□□ 1.27
SRCAP-204ENST00000474008 LAMC3Q9Y6N6 1575 aa22.91■■□□□ 1.26
SRCAP-204ENST00000474008 KIF21AQ7Z4S6 1674 aa22.87■■□□□ 1.25
SRCAP-204ENST00000474008 WIZO95785 1651 aa22.86■■□□□ 1.25
SRCAP-204ENST00000474008 PDS5BQ9NTI5 1447 aa22.85■■□□□ 1.25
SRCAP-204ENST00000474008 CADPSQ9ULU8 1353 aa22.85■■□□□ 1.25
SRCAP-204ENST00000474008 MRC2Q9UBG0 1479 aa22.69■■□□□ 1.22
SRCAP-204ENST00000474008 RSF1Q96T23 1441 aaPredicted RBP22.66■■□□□ 1.22
SRCAP-204ENST00000474008 WDR62O43379 1518 aa22.61■■□□□ 1.21
SRCAP-204ENST00000474008 TRIM41Q8WV44 630 aa22.6■■□□□ 1.21
SRCAP-204ENST00000474008 FANCD2Q9BXW9 1451 aa22.59■■□□□ 1.21
SRCAP-204ENST00000474008 CEP164Q9UPV0 1460 aa22.55■■□□□ 1.2
SRCAP-204ENST00000474008 CFTRP13569 1480 aa22.54■■□□□ 1.2
SRCAP-204ENST00000474008 PIAS4Q8N2W9 510 aaPredicted RBP22.5■■□□□ 1.19
SRCAP-204ENST00000474008 TOP2AP11388 1531 aaKnown RBP22.47■■□□□ 1.19
SRCAP-204ENST00000474008 URB2Q14146 1524 aaKnown RBP22.46■■□□□ 1.19
SRCAP-204ENST00000474008 CCDC88BA6NC98 1476 aa22.34■■□□□ 1.17
SRCAP-204ENST00000474008 OSCARQ8IYS5 282 aa22.33■■□□□ 1.17
SRCAP-204ENST00000474008 ZNF608Q9ULD9 1512 aaPredicted RBP22.26■■□□□ 1.15
SRCAP-204ENST00000474008 TOPBP1Q92547 1522 aa22.14■■□□□ 1.13
SRCAP-204ENST00000474008 IFT140Q96RY7 1462 aa22.11■■□□□ 1.13
SRCAP-204ENST00000474008 PRDM2Q13029 1718 aa22.06■■□□□ 1.12
SRCAP-204ENST00000474008 AQRO60306 1485 aaKnown RBP eCLIP22.05■■□□□ 1.124e-6■□□□□ 10.8
SRCAP-204ENST00000474008 RIMBP3CA6NJZ7 1639 aa21.99■■□□□ 1.11
SRCAP-204ENST00000474008 RIMBP3BA6NNM3 1639 aa21.99■■□□□ 1.11
SRCAP-204ENST00000474008 RIMBP3Q9UFD9 1639 aa21.99■■□□□ 1.11
SRCAP-204ENST00000474008 DNMBPQ6XZF7 1577 aa21.97■■□□□ 1.11
SRCAP-204ENST00000474008 EIF4G3O43432 1585 aaKnown RBP21.96■■□□□ 1.11
SRCAP-204ENST00000474008 RAD54L2Q9Y4B4 1467 aa21.96■■□□□ 1.11
SRCAP-204ENST00000474008 FBLN2P98095 1184 aa21.94■■□□□ 1.1
SRCAP-204ENST00000474008 ARHGEF11O15085 1522 aa21.93■■□□□ 1.1
SRCAP-204ENST00000474008 TARBP1Q13395 1621 aaKnown RBP21.92■■□□□ 1.1
SRCAP-204ENST00000474008 ABCC8Q09428 1581 aa21.92■■□□□ 1.1
SRCAP-204ENST00000474008 POLA1P09884 1462 aaPredicted RBP21.92■■□□□ 1.1
SRCAP-204ENST00000474008 CYB5RLQ6IPT4 315 aa21.92■■□□□ 1.1
SRCAP-204ENST00000474008 TDRD9Q8NDG6 1382 aaKnown RBP21.91■■□□□ 1.1
SRCAP-204ENST00000474008 SOGA1O94964 1423 aa21.84■■□□□ 1.09
SRCAP-204ENST00000474008 CHD1O14646 1710 aa21.8■■□□□ 1.08
SRCAP-204ENST00000474008 FGD5Q6ZNL6 1462 aa21.77■■□□□ 1.08
SRCAP-204ENST00000474008 MSH5O43196 834 aa21.77■■□□□ 1.08
SRCAP-204ENST00000474008 CUX1P39880 1505 aa21.76■■□□□ 1.07
SRCAP-204ENST00000474008 ARAP1Q96P48 1450 aa21.76■■□□□ 1.07
SRCAP-204ENST00000474008 SNAPC4Q5SXM2 1469 aa21.73■■□□□ 1.07
SRCAP-204ENST00000474008 SUPT5HO00267 1087 aaKnown RBP21.72■■□□□ 1.07
SRCAP-204ENST00000474008 CHMP7Q8WUX9 453 aaPredicted RBP21.68■■□□□ 1.06
SRCAP-204ENST00000474008 TRHP20396 242 aaPredicted RBP21.67■■□□□ 1.06
SRCAP-204ENST00000474008 CLASP1Q7Z460 1538 aa21.59■■□□□ 1.05
SRCAP-204ENST00000474008 GRIN2BQ13224 1484 aa21.58■■□□□ 1.05
SRCAP-204ENST00000474008 PPP4R3CPQ6ZMV5 832 aa21.58■■□□□ 1.05
SRCAP-204ENST00000474008 MAGI1Q96QZ7 1491 aaPredicted RBP21.55■■□□□ 1.04
SRCAP-204ENST00000474008 GAPVD1Q14C86 1478 aa21.53■■□□□ 1.04
SRCAP-204ENST00000474008 SYNJ2O15056 1496 aa21.52■■□□□ 1.04
SRCAP-204ENST00000474008 WDR97A6NE52 1622 aa21.49■■□□□ 1.03
SRCAP-204ENST00000474008 KCNA4P22459 653 aa21.49■■□□□ 1.03
SRCAP-204ENST00000474008 SYNJ1O43426 1573 aa21.48■■□□□ 1.03
SRCAP-204ENST00000474008 ABCA10Q8WWZ4 1543 aa21.46■■□□□ 1.03
SRCAP-204ENST00000474008 PBRM1Q86U86 1689 aa21.41■■□□□ 1.02
SRCAP-204ENST00000474008 ABCA5Q8WWZ7 1642 aa21.41■■□□□ 1.02
SRCAP-204ENST00000474008 ERCC6L2Q5T890 1561 aa21.4■■□□□ 1.02
SRCAP-204ENST00000474008 WRNQ14191 1432 aaPredicted RBP eCLIP21.37■■□□□ 1.01
SRCAP-204ENST00000474008 GRIN2AQ12879 1464 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms