RNA–Protein interactions for RNA: ENST00000473996.1

PLXNB1-213, Transcript of plexin B1, humanhuman

TSL 2

Gene PLXNB1, Length 1,034 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB1-213ENST00000473996 NISCHQ9Y2I1 1504 aa36.49■■■■□ 3.43
PLXNB1-213ENST00000473996 CCDC180Q9P1Z9 1646 aa32.69■■■□□ 2.82
PLXNB1-213ENST00000473996 ABCC9O60706 1549 aa32.44■■■□□ 2.78
PLXNB1-213ENST00000473996 RB1CC1Q8TDY2 1594 aa31.01■■■□□ 2.56
PLXNB1-213ENST00000473996 NACADO15069 1562 aa30.85■■■□□ 2.53
PLXNB1-213ENST00000473996 DCAF8L2P0C7V8 631 aa30.66■■■□□ 2.5
PLXNB1-213ENST00000473996 MYO15BQ96JP2 1530 aa30.52■■■□□ 2.48
PLXNB1-213ENST00000473996 UNC13AQ9UPW8 1703 aa30.31■■■□□ 2.44
PLXNB1-213ENST00000473996 ZCCHC6Q5VYS8 1495 aaKnown RBP30.29■■■□□ 2.44
PLXNB1-213ENST00000473996 DNAJC5BQ9UF47 199 aa30.23■■■□□ 2.43
PLXNB1-213ENST00000473996 PABPN1Q86U42 306 aaKnown RBP eCLIP30.22■■■□□ 2.437e-8■□□□□ 9.5
PLXNB1-213ENST00000473996 DCAF1Q9Y4B6 1507 aa30.19■■■□□ 2.42
PLXNB1-213ENST00000473996 BICRAQ9NZM4 1560 aa30.07■■■□□ 2.4
PLXNB1-213ENST00000473996 SHROOM4Q9ULL8 1493 aa29.75■■■□□ 2.35
PLXNB1-213ENST00000473996 SCRIBQ14160 1630 aa29.75■■■□□ 2.35
PLXNB1-213ENST00000473996 CC2D2AQ9P2K1 1620 aa29.34■■■□□ 2.29
PLXNB1-213ENST00000473996 EIF4G1Q04637 1599 aaKnown RBP29.33■■■□□ 2.29
PLXNB1-213ENST00000473996 CECR2Q9BXF3 1484 aa29.22■■■□□ 2.27
PLXNB1-213ENST00000473996 NCAPD3P42695 1498 aa28.46■■■□□ 2.15
PLXNB1-213ENST00000473996 SMARCA4P51532 1647 aa28.43■■■□□ 2.14
PLXNB1-213ENST00000473996 ATAD2BQ9ULI0 1458 aa28.4■■■□□ 2.14
PLXNB1-213ENST00000473996 SMARCA2P51531 1590 aa28.35■■■□□ 2.13
PLXNB1-213ENST00000473996 BAZ1AQ9NRL2 1556 aaPredicted RBP28.33■■■□□ 2.13
PLXNB1-213ENST00000473996 HMGXB3Q12766 1538 aa28.29■■■□□ 2.12
PLXNB1-213ENST00000473996 PEG3Q9GZU2 1588 aa28.17■■■□□ 2.1
PLXNB1-213ENST00000473996 BAZ1BQ9UIG0 1483 aaKnown RBP28.14■■■□□ 2.09
PLXNB1-213ENST00000473996 MROH2BQ7Z745 1585 aa28.1■■■□□ 2.09
PLXNB1-213ENST00000473996 ERCC6Q03468 1493 aa28.02■■■□□ 2.08
PLXNB1-213ENST00000473996 CUX2O14529 1486 aa27.93■■■□□ 2.06
PLXNB1-213ENST00000473996 NESP48681 1621 aa27.92■■■□□ 2.06
PLXNB1-213ENST00000473996 LAMC3Q9Y6N6 1575 aa27.81■■■□□ 2.04
PLXNB1-213ENST00000473996 WIZO95785 1651 aa27.78■■■□□ 2.04
PLXNB1-213ENST00000473996 DNAJC5Q9H3Z4 198 aa27.65■■■□□ 2.02
PLXNB1-213ENST00000473996 PDS5BQ9NTI5 1447 aa27.64■■■□□ 2.02
PLXNB1-213ENST00000473996 THOC2Q8NI27 1593 aaKnown RBP27.63■■■□□ 2.01
PLXNB1-213ENST00000473996 CADPSQ9ULU8 1353 aa27.6■■■□□ 2.01
PLXNB1-213ENST00000473996 RSF1Q96T23 1441 aaPredicted RBP27.6■■■□□ 2.01
PLXNB1-213ENST00000473996 KIF21AQ7Z4S6 1674 aa27.59■■■□□ 2.01
PLXNB1-213ENST00000473996 TOP2AP11388 1531 aaKnown RBP27.46■■□□□ 1.99
PLXNB1-213ENST00000473996 MRC2Q9UBG0 1479 aa27.38■■□□□ 1.97
PLXNB1-213ENST00000473996 CFTRP13569 1480 aa27.34■■□□□ 1.97
PLXNB1-213ENST00000473996 CEP164Q9UPV0 1460 aa27.32■■□□□ 1.96
PLXNB1-213ENST00000473996 WDR62O43379 1518 aa27.31■■□□□ 1.96
PLXNB1-213ENST00000473996 FANCD2Q9BXW9 1451 aa27.29■■□□□ 1.96
PLXNB1-213ENST00000473996 CCDC88BA6NC98 1476 aa27.13■■□□□ 1.93
PLXNB1-213ENST00000473996 PRDM2Q13029 1718 aa27.12■■□□□ 1.93
PLXNB1-213ENST00000473996 SUPT5HO00267 1087 aaKnown RBP27.08■■□□□ 1.93
PLXNB1-213ENST00000473996 URB2Q14146 1524 aaKnown RBP27.05■■□□□ 1.92
PLXNB1-213ENST00000473996 TOPBP1Q92547 1522 aa26.8■■□□□ 1.88
PLXNB1-213ENST00000473996 ABCC8Q09428 1581 aa26.78■■□□□ 1.88
PLXNB1-213ENST00000473996 IFT140Q96RY7 1462 aa26.75■■□□□ 1.87
PLXNB1-213ENST00000473996 DNMBPQ6XZF7 1577 aa26.72■■□□□ 1.87
PLXNB1-213ENST00000473996 ZNF608Q9ULD9 1512 aaPredicted RBP26.66■■□□□ 1.86
PLXNB1-213ENST00000473996 OSCARQ8IYS5 282 aa26.66■■□□□ 1.86
PLXNB1-213ENST00000473996 EIF4G3O43432 1585 aaKnown RBP26.55■■□□□ 1.84
PLXNB1-213ENST00000473996 TARBP1Q13395 1621 aaKnown RBP26.54■■□□□ 1.84
PLXNB1-213ENST00000473996 POLA1P09884 1462 aaPredicted RBP26.54■■□□□ 1.84
PLXNB1-213ENST00000473996 TRIM41Q8WV44 630 aa26.49■■□□□ 1.83
PLXNB1-213ENST00000473996 AQRO60306 1485 aaKnown RBP eCLIP26.45■■□□□ 1.822e-12■■■■■ 40
PLXNB1-213ENST00000473996 SOGA1O94964 1423 aa26.41■■□□□ 1.82
PLXNB1-213ENST00000473996 RAD54L2Q9Y4B4 1467 aa26.41■■□□□ 1.82
PLXNB1-213ENST00000473996 CUX1P39880 1505 aa26.4■■□□□ 1.82
PLXNB1-213ENST00000473996 FGD5Q6ZNL6 1462 aa26.39■■□□□ 1.82
PLXNB1-213ENST00000473996 WDR97A6NE52 1622 aa26.33■■□□□ 1.81
PLXNB1-213ENST00000473996 CHD1O14646 1710 aa26.32■■□□□ 1.8
PLXNB1-213ENST00000473996 TDRD9Q8NDG6 1382 aaKnown RBP26.32■■□□□ 1.8
PLXNB1-213ENST00000473996 RIMBP3CA6NJZ7 1639 aa26.29■■□□□ 1.8
PLXNB1-213ENST00000473996 RIMBP3BA6NNM3 1639 aa26.29■■□□□ 1.8
PLXNB1-213ENST00000473996 RIMBP3Q9UFD9 1639 aa26.29■■□□□ 1.8
PLXNB1-213ENST00000473996 ARHGEF11O15085 1522 aa26.24■■□□□ 1.79
PLXNB1-213ENST00000473996 FBLN2P98095 1184 aa26.23■■□□□ 1.79
PLXNB1-213ENST00000473996 SNAPC4Q5SXM2 1469 aa26.2■■□□□ 1.78
PLXNB1-213ENST00000473996 GRIN2BQ13224 1484 aa26.17■■□□□ 1.78
PLXNB1-213ENST00000473996 MAGI1Q96QZ7 1491 aaPredicted RBP26.17■■□□□ 1.78
PLXNB1-213ENST00000473996 ABCA10Q8WWZ4 1543 aa26.13■■□□□ 1.77
PLXNB1-213ENST00000473996 GAPVD1Q14C86 1478 aa26.11■■□□□ 1.77
PLXNB1-213ENST00000473996 CHMP7Q8WUX9 453 aaPredicted RBP26.09■■□□□ 1.77
PLXNB1-213ENST00000473996 PBRM1Q86U86 1689 aa26.09■■□□□ 1.77
PLXNB1-213ENST00000473996 SYNJ2O15056 1496 aa26.06■■□□□ 1.76
PLXNB1-213ENST00000473996 ABCA5Q8WWZ7 1642 aa26.06■■□□□ 1.76
PLXNB1-213ENST00000473996 WRNQ14191 1432 aaPredicted RBP eCLIP26.05■■□□□ 1.76
PLXNB1-213ENST00000473996 TOP2BQ02880 1626 aa26.05■■□□□ 1.76
PLXNB1-213ENST00000473996 BIVM-ERCC5R4GMW8 1640 aa26.05■■□□□ 1.76
PLXNB1-213ENST00000473996 SYNJ1O43426 1573 aa26.04■■□□□ 1.76
PLXNB1-213ENST00000473996 CLASP1Q7Z460 1538 aa26.03■■□□□ 1.76
PLXNB1-213ENST00000473996 CYB5RLQ6IPT4 315 aa26■■□□□ 1.75
PLXNB1-213ENST00000473996 ARAP1Q96P48 1450 aa25.98■■□□□ 1.75
PLXNB1-213ENST00000473996 ADAMTS12P58397 1594 aa25.85■■□□□ 1.73
PLXNB1-213ENST00000473996 GRIN2AQ12879 1464 aa25.84■■□□□ 1.73
PLXNB1-213ENST00000473996 ERICH3Q5RHP9 1530 aa25.81■■□□□ 1.72
PLXNB1-213ENST00000473996 FHAD1B1AJZ9 1412 aa25.79■■□□□ 1.72
PLXNB1-213ENST00000473996 NUP160Q12769 1436 aa25.75■■□□□ 1.71
PLXNB1-213ENST00000473996 CEP170Q5SW79 1584 aa25.73■■□□□ 1.71
PLXNB1-213ENST00000473996 TRHP20396 242 aaPredicted RBP25.65■■□□□ 1.7
PLXNB1-213ENST00000473996 SHROOM2Q13796 1616 aa25.61■■□□□ 1.69
PLXNB1-213ENST00000473996 ERCC6L2Q5T890 1561 aa25.61■■□□□ 1.69
PLXNB1-213ENST00000473996 KIF27Q86VH2 1401 aa25.54■■□□□ 1.68
PLXNB1-213ENST00000473996 IGF1RP08069 1367 aa25.49■■□□□ 1.67
PLXNB1-213ENST00000473996 CUL7Q14999 1698 aa25.48■■□□□ 1.67
PLXNB1-213ENST00000473996 RUSC2Q8N2Y8 1516 aa25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms