RNA–Protein interactions for RNA: ENST00000473963.1

TFR2-209, Transcript of transferrin receptor 2, humanhuman

TSL 3

Gene TFR2, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFR2-209ENST00000473963 NISCHQ9Y2I1 1504 aa33.87■■■■□ 3.01
TFR2-209ENST00000473963 CCDC180Q9P1Z9 1646 aa29.98■■■□□ 2.39
TFR2-209ENST00000473963 ABCC9O60706 1549 aa28.89■■■□□ 2.22
TFR2-209ENST00000473963 DCAF8L2P0C7V8 631 aa28.33■■■□□ 2.13
TFR2-209ENST00000473963 ZCCHC6Q5VYS8 1495 aaKnown RBP28.27■■■□□ 2.12
TFR2-209ENST00000473963 NACADO15069 1562 aa28.09■■■□□ 2.09
TFR2-209ENST00000473963 RB1CC1Q8TDY2 1594 aa28.04■■■□□ 2.08
TFR2-209ENST00000473963 DCAF1Q9Y4B6 1507 aa28.03■■■□□ 2.08
TFR2-209ENST00000473963 MYO15BQ96JP2 1530 aa28■■■□□ 2.07
TFR2-209ENST00000473963 SCRIBQ14160 1630 aa27.38■■□□□ 1.97
TFR2-209ENST00000473963 UNC13AQ9UPW8 1703 aa27.37■■□□□ 1.97
TFR2-209ENST00000473963 PABPN1Q86U42 306 aaKnown RBP eCLIP27.08■■□□□ 1.93
TFR2-209ENST00000473963 SHROOM4Q9ULL8 1493 aa27.07■■□□□ 1.92
TFR2-209ENST00000473963 BICRAQ9NZM4 1560 aa27.02■■□□□ 1.92
TFR2-209ENST00000473963 EIF4G1Q04637 1599 aaKnown RBP26.35■■□□□ 1.81
TFR2-209ENST00000473963 CECR2Q9BXF3 1484 aa26.28■■□□□ 1.8
TFR2-209ENST00000473963 BAZ1AQ9NRL2 1556 aaPredicted RBP26.28■■□□□ 1.8
TFR2-209ENST00000473963 SMARCA4P51532 1647 aa26.21■■□□□ 1.79
TFR2-209ENST00000473963 CC2D2AQ9P2K1 1620 aa26.15■■□□□ 1.78
TFR2-209ENST00000473963 MROH2BQ7Z745 1585 aa26.07■■□□□ 1.76
TFR2-209ENST00000473963 DNAJC5BQ9UF47 199 aa26.01■■□□□ 1.75
TFR2-209ENST00000473963 SMARCA2P51531 1590 aa26■■□□□ 1.75
TFR2-209ENST00000473963 RSF1Q96T23 1441 aaPredicted RBP25.94■■□□□ 1.74
TFR2-209ENST00000473963 ATAD2BQ9ULI0 1458 aa25.92■■□□□ 1.74
TFR2-209ENST00000473963 PEG3Q9GZU2 1588 aa25.9■■□□□ 1.74
TFR2-209ENST00000473963 WIZO95785 1651 aa25.87■■□□□ 1.73
TFR2-209ENST00000473963 NCAPD3P42695 1498 aa25.85■■□□□ 1.73
TFR2-209ENST00000473963 BAZ1BQ9UIG0 1483 aaKnown RBP25.82■■□□□ 1.72
TFR2-209ENST00000473963 HMGXB3Q12766 1538 aa25.78■■□□□ 1.72
TFR2-209ENST00000473963 SUPT5HO00267 1087 aaKnown RBP25.77■■□□□ 1.72
TFR2-209ENST00000473963 TOP2AP11388 1531 aaKnown RBP25.62■■□□□ 1.69
TFR2-209ENST00000473963 CCDC88BA6NC98 1476 aa25.3■■□□□ 1.64
TFR2-209ENST00000473963 CADPSQ9ULU8 1353 aa25.17■■□□□ 1.62
TFR2-209ENST00000473963 LAMC3Q9Y6N6 1575 aa25.16■■□□□ 1.62
TFR2-209ENST00000473963 NESP48681 1621 aa25.08■■□□□ 1.6
TFR2-209ENST00000473963 CFTRP13569 1480 aa25.06■■□□□ 1.6
TFR2-209ENST00000473963 PRDM2Q13029 1718 aa25.04■■□□□ 1.6
TFR2-209ENST00000473963 PDS5BQ9NTI5 1447 aa25.03■■□□□ 1.6
TFR2-209ENST00000473963 ERCC6Q03468 1493 aa24.97■■□□□ 1.59
TFR2-209ENST00000473963 FANCD2Q9BXW9 1451 aa24.88■■□□□ 1.57
TFR2-209ENST00000473963 KIF21AQ7Z4S6 1674 aa24.87■■□□□ 1.57
TFR2-209ENST00000473963 CEP164Q9UPV0 1460 aa24.83■■□□□ 1.57
TFR2-209ENST00000473963 MRC2Q9UBG0 1479 aa24.68■■□□□ 1.54
TFR2-209ENST00000473963 ABCC8Q09428 1581 aa24.64■■□□□ 1.54
TFR2-209ENST00000473963 THOC2Q8NI27 1593 aaKnown RBP24.6■■□□□ 1.53
TFR2-209ENST00000473963 DNMBPQ6XZF7 1577 aa24.54■■□□□ 1.52
TFR2-209ENST00000473963 WDR62O43379 1518 aa24.54■■□□□ 1.52
TFR2-209ENST00000473963 URB2Q14146 1524 aaKnown RBP24.53■■□□□ 1.52
TFR2-209ENST00000473963 WRNQ14191 1432 aaPredicted RBP eCLIP24.52■■□□□ 1.52
TFR2-209ENST00000473963 TOPBP1Q92547 1522 aa24.51■■□□□ 1.51
TFR2-209ENST00000473963 CUX2O14529 1486 aa24.48■■□□□ 1.51
TFR2-209ENST00000473963 CUX1P39880 1505 aa24.45■■□□□ 1.5
TFR2-209ENST00000473963 TOP2BQ02880 1626 aa24.39■■□□□ 1.5
TFR2-209ENST00000473963 BIVM-ERCC5R4GMW8 1640 aa24.39■■□□□ 1.5
TFR2-209ENST00000473963 SYNJ1O43426 1573 aa24.37■■□□□ 1.49
TFR2-209ENST00000473963 TRIM41Q8WV44 630 aa24.36■■□□□ 1.49
TFR2-209ENST00000473963 FGD5Q6ZNL6 1462 aa24.33■■□□□ 1.49
TFR2-209ENST00000473963 POLA1P09884 1462 aaPredicted RBP24.31■■□□□ 1.48
TFR2-209ENST00000473963 SOGA1O94964 1423 aa24.29■■□□□ 1.48
TFR2-209ENST00000473963 IFT140Q96RY7 1462 aa24.29■■□□□ 1.48
TFR2-209ENST00000473963 CHIC1Q5VXU3 224 aa24.22■■□□□ 1.47
TFR2-209ENST00000473963 RAD54L2Q9Y4B4 1467 aa24.19■■□□□ 1.46
TFR2-209ENST00000473963 TARBP1Q13395 1621 aaKnown RBP24.17■■□□□ 1.46
TFR2-209ENST00000473963 ABCA10Q8WWZ4 1543 aa24.12■■□□□ 1.45
TFR2-209ENST00000473963 WDR97A6NE52 1622 aa24.1■■□□□ 1.45
TFR2-209ENST00000473963 TDRD9Q8NDG6 1382 aaKnown RBP24.06■■□□□ 1.44
TFR2-209ENST00000473963 ZNF608Q9ULD9 1512 aaPredicted RBP24.05■■□□□ 1.44
TFR2-209ENST00000473963 EIF4G3O43432 1585 aaKnown RBP24.03■■□□□ 1.44
TFR2-209ENST00000473963 KIF27Q86VH2 1401 aa24.02■■□□□ 1.44
TFR2-209ENST00000473963 AQRO60306 1485 aaKnown RBP eCLIP24.02■■□□□ 1.442e-11■■■□□ 17.7
TFR2-209ENST00000473963 GAPVD1Q14C86 1478 aa24.01■■□□□ 1.43
TFR2-209ENST00000473963 ABCA5Q8WWZ7 1642 aa23.96■■□□□ 1.43
TFR2-209ENST00000473963 PBRM1Q86U86 1689 aa23.95■■□□□ 1.43
TFR2-209ENST00000473963 GRIN2BQ13224 1484 aa23.94■■□□□ 1.42
TFR2-209ENST00000473963 EEA1Q15075 1411 aa23.87■■□□□ 1.41
TFR2-209ENST00000473963 ERICH3Q5RHP9 1530 aa23.87■■□□□ 1.41
TFR2-209ENST00000473963 MAGI1Q96QZ7 1491 aaPredicted RBP23.83■■□□□ 1.41
TFR2-209ENST00000473963 SNAPC4Q5SXM2 1469 aa23.81■■□□□ 1.4
TFR2-209ENST00000473963 FAM9AQ8IZU1 332 aaPredicted RBP23.81■■□□□ 1.4
TFR2-209ENST00000473963 FBLN2P98095 1184 aa23.8■■□□□ 1.4
TFR2-209ENST00000473963 RUSC2Q8N2Y8 1516 aa23.79■■□□□ 1.4
TFR2-209ENST00000473963 CHMP7Q8WUX9 453 aaPredicted RBP23.79■■□□□ 1.4
TFR2-209ENST00000473963 IGF1RP08069 1367 aa23.78■■□□□ 1.4
TFR2-209ENST00000473963 CUL7Q14999 1698 aa23.78■■□□□ 1.4
TFR2-209ENST00000473963 CSRNP3Q8WYN3 585 aa23.77■■□□□ 1.4
TFR2-209ENST00000473963 FHAD1B1AJZ9 1412 aa23.75■■□□□ 1.39
TFR2-209ENST00000473963 SYNJ2O15056 1496 aa23.73■■□□□ 1.39
TFR2-209ENST00000473963 CARMIL1Q5VZK9 1371 aa23.72■■□□□ 1.39
TFR2-209ENST00000473963 ADAMTS12P58397 1594 aa23.72■■□□□ 1.39
TFR2-209ENST00000473963 CHD1O14646 1710 aa23.7■■□□□ 1.39
TFR2-209ENST00000473963 DNAJC5Q9H3Z4 198 aa23.7■■□□□ 1.38
TFR2-209ENST00000473963 OSCARQ8IYS5 282 aa23.63■■□□□ 1.37
TFR2-209ENST00000473963 RAPGEF2Q9Y4G8 1499 aa23.62■■□□□ 1.37
TFR2-209ENST00000473963 GRIN2AQ12879 1464 aa23.61■■□□□ 1.37
TFR2-209ENST00000473963 PRXQ9BXM0 1461 aa23.56■■□□□ 1.36
TFR2-209ENST00000473963 KIF21BO75037 1637 aa23.52■■□□□ 1.36
TFR2-209ENST00000473963 UBTFP17480 764 aaKnown RBP23.47■■□□□ 1.35
TFR2-209ENST00000473963 EHMT2Q96KQ7 1210 aa23.47■■□□□ 1.35
TFR2-209ENST00000473963 GOLGA3Q08378 1498 aa23.45■■□□□ 1.34
TFR2-209ENST00000473963 NUP160Q12769 1436 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms