RNA–Protein interactions for RNA: ENST00000473795.1

ABCB4-210, Transcript of ATP binding cassette subfamily B member 4, humanhuman

TSL 1 (best)

Gene ABCB4, Length 1,115 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB4-210ENST00000473795 AEBP2Q6ZN18 517 aaPredicted RBP24.51■■□□□ 1.51
ABCB4-210ENST00000473795 NISCHQ9Y2I1 1504 aa24.44■■□□□ 1.5
ABCB4-210ENST00000473795 CHIC1Q5VXU3 224 aa23.2■■□□□ 1.3
ABCB4-210ENST00000473795 ABCC9O60706 1549 aa22.7■■□□□ 1.22
ABCB4-210ENST00000473795 DNAJC5BQ9UF47 199 aa22.35■■□□□ 1.17
ABCB4-210ENST00000473795 CCDC180Q9P1Z9 1646 aa21.72■■□□□ 1.07
ABCB4-210ENST00000473795 DNAJC5Q9H3Z4 198 aa21.29■■□□□ 1
ABCB4-210ENST00000473795 RB1CC1Q8TDY2 1594 aa21.1■□□□□ 0.97
ABCB4-210ENST00000473795 SENP3Q9H4L4 574 aaPredicted RBP21.03■□□□□ 0.96
ABCB4-210ENST00000473795 PABPN1Q86U42 306 aaKnown RBP eCLIP20.9■□□□□ 0.94
ABCB4-210ENST00000473795 UNC13AQ9UPW8 1703 aa20.81■□□□□ 0.92
ABCB4-210ENST00000473795 PHF23Q9BUL5 403 aaPredicted RBP20.67■□□□□ 0.9
ABCB4-210ENST00000473795 NACADO15069 1562 aa20.66■□□□□ 0.9
ABCB4-210ENST00000473795 BICRAQ9NZM4 1560 aa20.63■□□□□ 0.89
ABCB4-210ENST00000473795 CECR2Q9BXF3 1484 aa20.56■□□□□ 0.88
ABCB4-210ENST00000473795 CC2D2AQ9P2K1 1620 aa20.49■□□□□ 0.87
ABCB4-210ENST00000473795 DCAF8L2P0C7V8 631 aa20.42■□□□□ 0.86
ABCB4-210ENST00000473795 ZCCHC6Q5VYS8 1495 aaKnown RBP20.33■□□□□ 0.85
ABCB4-210ENST00000473795 MYO15BQ96JP2 1530 aa20.27■□□□□ 0.83
ABCB4-210ENST00000473795 DCAF1Q9Y4B6 1507 aa20.17■□□□□ 0.82
ABCB4-210ENST00000473795 EIF4G1Q04637 1599 aaKnown RBP20.16■□□□□ 0.82
ABCB4-210ENST00000473795 SHROOM4Q9ULL8 1493 aa20.11■□□□□ 0.81
ABCB4-210ENST00000473795 CUX2O14529 1486 aa20.02■□□□□ 0.8
ABCB4-210ENST00000473795 TRIM41Q8WV44 630 aa19.85■□□□□ 0.77
ABCB4-210ENST00000473795 SCRIBQ14160 1630 aa19.84■□□□□ 0.77
ABCB4-210ENST00000473795 ERCC6Q03468 1493 aa19.61■□□□□ 0.73
ABCB4-210ENST00000473795 FOXD1Q16676 465 aa19.55■□□□□ 0.72
ABCB4-210ENST00000473795 THOC2Q8NI27 1593 aaKnown RBP19.3■□□□□ 0.68
ABCB4-210ENST00000473795 NESP48681 1621 aa19.21■□□□□ 0.67
ABCB4-210ENST00000473795 NCAPD3P42695 1498 aa19.08■□□□□ 0.64
ABCB4-210ENST00000473795 SMARCA2P51531 1590 aa19.02■□□□□ 0.64
ABCB4-210ENST00000473795 KIF21AQ7Z4S6 1674 aa19■□□□□ 0.63
ABCB4-210ENST00000473795 BAZ1AQ9NRL2 1556 aaPredicted RBP18.99■□□□□ 0.63
ABCB4-210ENST00000473795 SMARCA4P51532 1647 aa18.97■□□□□ 0.63
ABCB4-210ENST00000473795 ATAD2BQ9ULI0 1458 aa18.89■□□□□ 0.61
ABCB4-210ENST00000473795 RIMBP3CA6NJZ7 1639 aa18.88■□□□□ 0.61
ABCB4-210ENST00000473795 RIMBP3BA6NNM3 1639 aa18.88■□□□□ 0.61
ABCB4-210ENST00000473795 RIMBP3Q9UFD9 1639 aa18.88■□□□□ 0.61
ABCB4-210ENST00000473795 HMGXB3Q12766 1538 aa18.87■□□□□ 0.61
ABCB4-210ENST00000473795 MROH2BQ7Z745 1585 aa18.87■□□□□ 0.61
ABCB4-210ENST00000473795 LAMC3Q9Y6N6 1575 aa18.86■□□□□ 0.61
ABCB4-210ENST00000473795 OSCARQ8IYS5 282 aa18.82■□□□□ 0.6
ABCB4-210ENST00000473795 PEG3Q9GZU2 1588 aa18.78■□□□□ 0.6
ABCB4-210ENST00000473795 WDR62O43379 1518 aa18.71■□□□□ 0.59
ABCB4-210ENST00000473795 PDS5BQ9NTI5 1447 aa18.71■□□□□ 0.59
ABCB4-210ENST00000473795 BAZ1BQ9UIG0 1483 aaKnown RBP18.68■□□□□ 0.58
ABCB4-210ENST00000473795 WIZO95785 1651 aa18.68■□□□□ 0.58
ABCB4-210ENST00000473795 MRC2Q9UBG0 1479 aa18.67■□□□□ 0.58
ABCB4-210ENST00000473795 ARHGEF11O15085 1522 aa18.65■□□□□ 0.58
ABCB4-210ENST00000473795 RSF1Q96T23 1441 aaPredicted RBP18.61■□□□□ 0.57
ABCB4-210ENST00000473795 TRHP20396 242 aaPredicted RBP18.61■□□□□ 0.57
ABCB4-210ENST00000473795 CYB5RLQ6IPT4 315 aa18.48■□□□□ 0.55
ABCB4-210ENST00000473795 PLPPR3Q6T4P5 718 aa18.47■□□□□ 0.55
ABCB4-210ENST00000473795 MSH5O43196 834 aa18.45■□□□□ 0.54
ABCB4-210ENST00000473795 ILDR1Q86SU0 546 aaPredicted RBP18.42■□□□□ 0.54
ABCB4-210ENST00000473795 CADPSQ9ULU8 1353 aa18.41■□□□□ 0.54
ABCB4-210ENST00000473795 ARAP1Q96P48 1450 aa18.4■□□□□ 0.54
ABCB4-210ENST00000473795 TOP2AP11388 1531 aaKnown RBP18.4■□□□□ 0.54
ABCB4-210ENST00000473795 CEP164Q9UPV0 1460 aa18.36■□□□□ 0.53
ABCB4-210ENST00000473795 FANCD2Q9BXW9 1451 aa18.24■□□□□ 0.51
ABCB4-210ENST00000473795 CCDC88BA6NC98 1476 aa18.23■□□□□ 0.51
ABCB4-210ENST00000473795 URB2Q14146 1524 aaKnown RBP18.21■□□□□ 0.51
ABCB4-210ENST00000473795 POTEDQ86YR6 584 aa18.2■□□□□ 0.5
ABCB4-210ENST00000473795 CFTRP13569 1480 aa18.2■□□□□ 0.5
ABCB4-210ENST00000473795 CHD1O14646 1710 aa18.18■□□□□ 0.5
ABCB4-210ENST00000473795 PIAS4Q8N2W9 510 aaPredicted RBP18.18■□□□□ 0.5
ABCB4-210ENST00000473795 ZNF608Q9ULD9 1512 aaPredicted RBP18.17■□□□□ 0.5
ABCB4-210ENST00000473795 PPP6R1Q9UPN7 881 aa18.11■□□□□ 0.49
ABCB4-210ENST00000473795 PRDM2Q13029 1718 aa18.07■□□□□ 0.48
ABCB4-210ENST00000473795 SUPT5HO00267 1087 aaKnown RBP18.07■□□□□ 0.48
ABCB4-210ENST00000473795 EIF4G3O43432 1585 aaKnown RBP18.04■□□□□ 0.48
ABCB4-210ENST00000473795 IFT140Q96RY7 1462 aa18.02■□□□□ 0.48
ABCB4-210ENST00000473795 ADRA2BP18089 450 aa18.01■□□□□ 0.47
ABCB4-210ENST00000473795 CLASP1Q7Z460 1538 aa17.89■□□□□ 0.45
ABCB4-210ENST00000473795 FBLN2P98095 1184 aa17.83■□□□□ 0.44
ABCB4-210ENST00000473795 TOPBP1Q92547 1522 aa17.82■□□□□ 0.44
ABCB4-210ENST00000473795 AQRO60306 1485 aaKnown RBP eCLIP17.82■□□□□ 0.44
ABCB4-210ENST00000473795 KDM4FA0A1W2PPD8 638 aa17.8■□□□□ 0.44
ABCB4-210ENST00000473795 KIF13AQ9H1H9 1805 aa17.79■□□□□ 0.44
ABCB4-210ENST00000473795 TARBP1Q13395 1621 aaKnown RBP17.78■□□□□ 0.44
ABCB4-210ENST00000473795 DNMBPQ6XZF7 1577 aa17.77■□□□□ 0.44
ABCB4-210ENST00000473795 ABCC8Q09428 1581 aa17.74■□□□□ 0.43
ABCB4-210ENST00000473795 GAPVD1Q14C86 1478 aa17.73■□□□□ 0.43
ABCB4-210ENST00000473795 SYNJ1O43426 1573 aa17.71■□□□□ 0.43
ABCB4-210ENST00000473795 CUX1P39880 1505 aa17.69■□□□□ 0.42
ABCB4-210ENST00000473795 POLA1P09884 1462 aaPredicted RBP17.67■□□□□ 0.42
ABCB4-210ENST00000473795 RAD54L2Q9Y4B4 1467 aa17.63■□□□□ 0.41
ABCB4-210ENST00000473795 ERCC6L2Q5T890 1561 aa17.62■□□□□ 0.41
ABCB4-210ENST00000473795 SNAPC4Q5SXM2 1469 aa17.62■□□□□ 0.41
ABCB4-210ENST00000473795 FGD5Q6ZNL6 1462 aa17.61■□□□□ 0.41
ABCB4-210ENST00000473795 SOGA1O94964 1423 aa17.57■□□□□ 0.4
ABCB4-210ENST00000473795 HECW2Q9P2P5 1572 aa17.57■□□□□ 0.4
ABCB4-210ENST00000473795 TDRD9Q8NDG6 1382 aaKnown RBP17.52■□□□□ 0.39
ABCB4-210ENST00000473795 CHMP7Q8WUX9 453 aaPredicted RBP17.51■□□□□ 0.39
ABCB4-210ENST00000473795 WDR97A6NE52 1622 aa17.5■□□□□ 0.39
ABCB4-210ENST00000473795 BIVM-ERCC5R4GMW8 1640 aa17.5■□□□□ 0.39
ABCB4-210ENST00000473795 FBXO41Q8TF61 875 aa17.5■□□□□ 0.39
ABCB4-210ENST00000473795 MAGI1Q96QZ7 1491 aaPredicted RBP17.5■□□□□ 0.39
ABCB4-210ENST00000473795 WRNQ14191 1432 aaPredicted RBP eCLIP17.49■□□□□ 0.39
ABCB4-210ENST00000473795 KDM6BO15054 1643 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 139.9 ms