RNA–Protein interactions for RNA: ENST00000473656.5

TWNK-204, Transcript of twinkle mtDNA helicase, humanhuman

TSL 2

Gene TWNK, Length 946 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TWNK-204ENST00000473656 NISCHQ9Y2I1 1504 aa29.19■■■□□ 2.26
TWNK-204ENST00000473656 CCDC180Q9P1Z9 1646 aa26.28■■□□□ 1.8
TWNK-204ENST00000473656 ABCC9O60706 1549 aa26.09■■□□□ 1.77
TWNK-204ENST00000473656 RB1CC1Q8TDY2 1594 aa24.91■■□□□ 1.58
TWNK-204ENST00000473656 NACADO15069 1562 aa24.76■■□□□ 1.55
TWNK-204ENST00000473656 UNC13AQ9UPW8 1703 aa24.55■■□□□ 1.52
TWNK-204ENST00000473656 DNAJC5BQ9UF47 199 aa24.48■■□□□ 1.51
TWNK-204ENST00000473656 MYO15BQ96JP2 1530 aa24.47■■□□□ 1.51
TWNK-204ENST00000473656 DCAF8L2P0C7V8 631 aa24.35■■□□□ 1.49
TWNK-204ENST00000473656 BICRAQ9NZM4 1560 aa24.28■■□□□ 1.48
TWNK-204ENST00000473656 PABPN1Q86U42 306 aaKnown RBP eCLIP24.22■■□□□ 1.47
TWNK-204ENST00000473656 ZCCHC6Q5VYS8 1495 aaKnown RBP24.21■■□□□ 1.47
TWNK-204ENST00000473656 DCAF1Q9Y4B6 1507 aa24.16■■□□□ 1.46
TWNK-204ENST00000473656 SHROOM4Q9ULL8 1493 aa23.9■■□□□ 1.42
TWNK-204ENST00000473656 SCRIBQ14160 1630 aa23.84■■□□□ 1.41
TWNK-204ENST00000473656 CC2D2AQ9P2K1 1620 aa23.66■■□□□ 1.38
TWNK-204ENST00000473656 EIF4G1Q04637 1599 aaKnown RBP23.61■■□□□ 1.37
TWNK-204ENST00000473656 CECR2Q9BXF3 1484 aa23.5■■□□□ 1.35
TWNK-204ENST00000473656 NCAPD3P42695 1498 aa22.84■■□□□ 1.25
TWNK-204ENST00000473656 SMARCA4P51532 1647 aa22.8■■□□□ 1.24
TWNK-204ENST00000473656 ATAD2BQ9ULI0 1458 aa22.76■■□□□ 1.23
TWNK-204ENST00000473656 HMGXB3Q12766 1538 aa22.71■■□□□ 1.23
TWNK-204ENST00000473656 SMARCA2P51531 1590 aa22.71■■□□□ 1.23
TWNK-204ENST00000473656 BAZ1AQ9NRL2 1556 aaPredicted RBP22.63■■□□□ 1.21
TWNK-204ENST00000473656 PEG3Q9GZU2 1588 aa22.62■■□□□ 1.21
TWNK-204ENST00000473656 CUX2O14529 1486 aa22.53■■□□□ 1.2
TWNK-204ENST00000473656 BAZ1BQ9UIG0 1483 aaKnown RBP22.5■■□□□ 1.19
TWNK-204ENST00000473656 MROH2BQ7Z745 1585 aa22.48■■□□□ 1.19
TWNK-204ENST00000473656 ERCC6Q03468 1493 aa22.47■■□□□ 1.19
TWNK-204ENST00000473656 NESP48681 1621 aa22.46■■□□□ 1.19
TWNK-204ENST00000473656 DNAJC5Q9H3Z4 198 aa22.43■■□□□ 1.18
TWNK-204ENST00000473656 LAMC3Q9Y6N6 1575 aa22.36■■□□□ 1.17
TWNK-204ENST00000473656 THOC2Q8NI27 1593 aaKnown RBP22.33■■□□□ 1.16
TWNK-204ENST00000473656 KIF21AQ7Z4S6 1674 aa22.29■■□□□ 1.16
TWNK-204ENST00000473656 WIZO95785 1651 aa22.26■■□□□ 1.15
TWNK-204ENST00000473656 PDS5BQ9NTI5 1447 aa22.12■■□□□ 1.13
TWNK-204ENST00000473656 CADPSQ9ULU8 1353 aa22.09■■□□□ 1.13
TWNK-204ENST00000473656 RSF1Q96T23 1441 aaPredicted RBP21.98■■□□□ 1.11
TWNK-204ENST00000473656 WDR62O43379 1518 aa21.98■■□□□ 1.11
TWNK-204ENST00000473656 MRC2Q9UBG0 1479 aa21.97■■□□□ 1.11
TWNK-204ENST00000473656 TOP2AP11388 1531 aaKnown RBP21.94■■□□□ 1.1
TWNK-204ENST00000473656 CFTRP13569 1480 aa21.89■■□□□ 1.09
TWNK-204ENST00000473656 CEP164Q9UPV0 1460 aa21.87■■□□□ 1.09
TWNK-204ENST00000473656 PRDM2Q13029 1718 aa21.86■■□□□ 1.09
TWNK-204ENST00000473656 FANCD2Q9BXW9 1451 aa21.85■■□□□ 1.09
TWNK-204ENST00000473656 URB2Q14146 1524 aaKnown RBP21.72■■□□□ 1.07
TWNK-204ENST00000473656 CCDC88BA6NC98 1476 aa21.66■■□□□ 1.06
TWNK-204ENST00000473656 TOPBP1Q92547 1522 aa21.47■■□□□ 1.03
TWNK-204ENST00000473656 IFT140Q96RY7 1462 aa21.44■■□□□ 1.02
TWNK-204ENST00000473656 DNMBPQ6XZF7 1577 aa21.42■■□□□ 1.02
TWNK-204ENST00000473656 ZNF608Q9ULD9 1512 aaPredicted RBP21.42■■□□□ 1.02
TWNK-204ENST00000473656 ABCC8Q09428 1581 aa21.4■■□□□ 1.02
TWNK-204ENST00000473656 OSCARQ8IYS5 282 aa21.38■■□□□ 1.01
TWNK-204ENST00000473656 TARBP1Q13395 1621 aaKnown RBP21.37■■□□□ 1.01
TWNK-204ENST00000473656 EIF4G3O43432 1585 aaKnown RBP21.36■■□□□ 1.01
TWNK-204ENST00000473656 TRIM41Q8WV44 630 aa21.34■■□□□ 1.01
TWNK-204ENST00000473656 RIMBP3CA6NJZ7 1639 aa21.27■■□□□ 1
TWNK-204ENST00000473656 RIMBP3BA6NNM3 1639 aa21.27■■□□□ 1
TWNK-204ENST00000473656 RIMBP3Q9UFD9 1639 aa21.27■■□□□ 1
TWNK-204ENST00000473656 CHD1O14646 1710 aa21.25■□□□□ 0.99
TWNK-204ENST00000473656 POLA1P09884 1462 aaPredicted RBP21.25■□□□□ 0.99
TWNK-204ENST00000473656 AQRO60306 1485 aaKnown RBP eCLIP21.19■□□□□ 0.988e-7■■■□□ 16.1
TWNK-204ENST00000473656 ARHGEF11O15085 1522 aa21.15■□□□□ 0.98
TWNK-204ENST00000473656 WDR97A6NE52 1622 aa21.15■□□□□ 0.98
TWNK-204ENST00000473656 RAD54L2Q9Y4B4 1467 aa21.14■□□□□ 0.98
TWNK-204ENST00000473656 CUX1P39880 1505 aa21.13■□□□□ 0.97
TWNK-204ENST00000473656 FGD5Q6ZNL6 1462 aa21.1■□□□□ 0.97
TWNK-204ENST00000473656 SOGA1O94964 1423 aa21.09■□□□□ 0.97
TWNK-204ENST00000473656 TDRD9Q8NDG6 1382 aaKnown RBP21.02■□□□□ 0.96
TWNK-204ENST00000473656 PBRM1Q86U86 1689 aa21■□□□□ 0.95
TWNK-204ENST00000473656 SNAPC4Q5SXM2 1469 aa21■□□□□ 0.95
TWNK-204ENST00000473656 CLASP1Q7Z460 1538 aa20.98■□□□□ 0.95
TWNK-204ENST00000473656 ARAP1Q96P48 1450 aa20.95■□□□□ 0.94
TWNK-204ENST00000473656 MAGI1Q96QZ7 1491 aaPredicted RBP20.95■□□□□ 0.94
TWNK-204ENST00000473656 GRIN2BQ13224 1484 aa20.93■□□□□ 0.94
TWNK-204ENST00000473656 ABCA5Q8WWZ7 1642 aa20.93■□□□□ 0.94
TWNK-204ENST00000473656 FBLN2P98095 1184 aa20.9■□□□□ 0.94
TWNK-204ENST00000473656 SYNJ1O43426 1573 aa20.89■□□□□ 0.94
TWNK-204ENST00000473656 ABCA10Q8WWZ4 1543 aa20.89■□□□□ 0.94
TWNK-204ENST00000473656 SYNJ2O15056 1496 aa20.88■□□□□ 0.93
TWNK-204ENST00000473656 BIVM-ERCC5R4GMW8 1640 aa20.87■□□□□ 0.93
TWNK-204ENST00000473656 GAPVD1Q14C86 1478 aa20.87■□□□□ 0.93
TWNK-204ENST00000473656 CYB5RLQ6IPT4 315 aa20.86■□□□□ 0.93
TWNK-204ENST00000473656 SUPT5HO00267 1087 aaKnown RBP20.84■□□□□ 0.93
TWNK-204ENST00000473656 TOP2BQ02880 1626 aa20.82■□□□□ 0.92
TWNK-204ENST00000473656 CHMP7Q8WUX9 453 aaPredicted RBP20.8■□□□□ 0.92
TWNK-204ENST00000473656 ADAMTS12P58397 1594 aa20.74■□□□□ 0.91
TWNK-204ENST00000473656 WRNQ14191 1432 aaPredicted RBP eCLIP20.72■□□□□ 0.91
TWNK-204ENST00000473656 GRIN2AQ12879 1464 aa20.69■□□□□ 0.9
TWNK-204ENST00000473656 CEP170Q5SW79 1584 aa20.67■□□□□ 0.9
TWNK-204ENST00000473656 ERICH3Q5RHP9 1530 aa20.64■□□□□ 0.9
TWNK-204ENST00000473656 NUP160Q12769 1436 aa20.64■□□□□ 0.89
TWNK-204ENST00000473656 SHROOM2Q13796 1616 aa20.64■□□□□ 0.89
TWNK-204ENST00000473656 ERCC6L2Q5T890 1561 aa20.63■□□□□ 0.89
TWNK-204ENST00000473656 FHAD1B1AJZ9 1412 aa20.59■□□□□ 0.89
TWNK-204ENST00000473656 TRHP20396 242 aaPredicted RBP20.56■□□□□ 0.88
TWNK-204ENST00000473656 RUSC2Q8N2Y8 1516 aa20.45■□□□□ 0.86
TWNK-204ENST00000473656 KIF13AQ9H1H9 1805 aa20.39■□□□□ 0.86
TWNK-204ENST00000473656 CUL7Q14999 1698 aa20.38■□□□□ 0.85
TWNK-204ENST00000473656 PRG4Q92954 1404 aaPredicted RBP20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms