RNA–Protein interactions for RNA: ENST00000473645.6

PDCD10-208, Transcript of programmed cell death 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCD10, Length 1,360 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD10-208ENST00000473645 AEBP2Q6ZN18 517 aaPredicted RBP26.66■■□□□ 1.86
PDCD10-208ENST00000473645 CHIC1Q5VXU3 224 aa25.54■■□□□ 1.68
PDCD10-208ENST00000473645 NISCHQ9Y2I1 1504 aa24.36■■□□□ 1.49
PDCD10-208ENST00000473645 SENP3Q9H4L4 574 aaPredicted RBP22.66■■□□□ 1.22
PDCD10-208ENST00000473645 PHF23Q9BUL5 403 aaPredicted RBP22.42■■□□□ 1.18
PDCD10-208ENST00000473645 ABCC9O60706 1549 aa21.89■■□□□ 1.1
PDCD10-208ENST00000473645 CCDC180Q9P1Z9 1646 aa21.81■■□□□ 1.08
PDCD10-208ENST00000473645 FOXD1Q16676 465 aa21.12■□□□□ 0.97
PDCD10-208ENST00000473645 RB1CC1Q8TDY2 1594 aa20.81■□□□□ 0.92
PDCD10-208ENST00000473645 NACADO15069 1562 aa20.67■□□□□ 0.9
PDCD10-208ENST00000473645 DCAF8L2P0C7V8 631 aa20.64■□□□□ 0.89
PDCD10-208ENST00000473645 DNAJC5BQ9UF47 199 aa20.64■□□□□ 0.89
PDCD10-208ENST00000473645 PLPPR3Q6T4P5 718 aa20.48■□□□□ 0.87
PDCD10-208ENST00000473645 PABPN1Q86U42 306 aaKnown RBP eCLIP20.43■□□□□ 0.86
PDCD10-208ENST00000473645 MYO15BQ96JP2 1530 aa20.38■□□□□ 0.85
PDCD10-208ENST00000473645 UNC13AQ9UPW8 1703 aa20.31■□□□□ 0.84
PDCD10-208ENST00000473645 BICRAQ9NZM4 1560 aa20.22■□□□□ 0.83
PDCD10-208ENST00000473645 ZCCHC6Q5VYS8 1495 aaKnown RBP20.15■□□□□ 0.82
PDCD10-208ENST00000473645 DCAF1Q9Y4B6 1507 aa20.11■□□□□ 0.81
PDCD10-208ENST00000473645 PPP6R1Q9UPN7 881 aa19.95■□□□□ 0.78
PDCD10-208ENST00000473645 SHROOM4Q9ULL8 1493 aa19.92■□□□□ 0.78
PDCD10-208ENST00000473645 SCRIBQ14160 1630 aa19.88■□□□□ 0.77
PDCD10-208ENST00000473645 ADRA2BP18089 450 aa19.87■□□□□ 0.77
PDCD10-208ENST00000473645 CC2D2AQ9P2K1 1620 aa19.76■□□□□ 0.75
PDCD10-208ENST00000473645 PIAS4Q8N2W9 510 aaPredicted RBP19.76■□□□□ 0.75
PDCD10-208ENST00000473645 CECR2Q9BXF3 1484 aa19.73■□□□□ 0.75
PDCD10-208ENST00000473645 EIF4G1Q04637 1599 aaKnown RBP19.71■□□□□ 0.75
PDCD10-208ENST00000473645 MSH5O43196 834 aa19.64■□□□□ 0.73
PDCD10-208ENST00000473645 NCAPD3P42695 1498 aa19.12■□□□□ 0.65
PDCD10-208ENST00000473645 ATAD2BQ9ULI0 1458 aa19.04■□□□□ 0.64
PDCD10-208ENST00000473645 DNAJC5Q9H3Z4 198 aa18.98■□□□□ 0.63
PDCD10-208ENST00000473645 SMARCA4P51532 1647 aa18.97■□□□□ 0.63
PDCD10-208ENST00000473645 SMARCA2P51531 1590 aa18.96■□□□□ 0.63
PDCD10-208ENST00000473645 HMGXB3Q12766 1538 aa18.92■□□□□ 0.62
PDCD10-208ENST00000473645 ERCC6Q03468 1493 aa18.89■□□□□ 0.61
PDCD10-208ENST00000473645 BAZ1AQ9NRL2 1556 aaPredicted RBP18.89■□□□□ 0.61
PDCD10-208ENST00000473645 CUX2O14529 1486 aa18.87■□□□□ 0.61
PDCD10-208ENST00000473645 BAZ1BQ9UIG0 1483 aaKnown RBP18.84■□□□□ 0.61
PDCD10-208ENST00000473645 NESP48681 1621 aa18.81■□□□□ 0.6
PDCD10-208ENST00000473645 PEG3Q9GZU2 1588 aa18.8■□□□□ 0.6
PDCD10-208ENST00000473645 POTEDQ86YR6 584 aa18.79■□□□□ 0.6
PDCD10-208ENST00000473645 MROH2BQ7Z745 1585 aa18.77■□□□□ 0.59
PDCD10-208ENST00000473645 LAMC3Q9Y6N6 1575 aa18.65■□□□□ 0.58
PDCD10-208ENST00000473645 PDS5BQ9NTI5 1447 aa18.58■□□□□ 0.56
PDCD10-208ENST00000473645 THOC2Q8NI27 1593 aaKnown RBP18.57■□□□□ 0.56
PDCD10-208ENST00000473645 CADPSQ9ULU8 1353 aa18.54■□□□□ 0.56
PDCD10-208ENST00000473645 WIZO95785 1651 aa18.52■□□□□ 0.56
PDCD10-208ENST00000473645 KIF21AQ7Z4S6 1674 aa18.51■□□□□ 0.55
PDCD10-208ENST00000473645 MRC2Q9UBG0 1479 aa18.4■□□□□ 0.54
PDCD10-208ENST00000473645 RSF1Q96T23 1441 aaPredicted RBP18.39■□□□□ 0.54
PDCD10-208ENST00000473645 WDR62O43379 1518 aa18.33■□□□□ 0.53
PDCD10-208ENST00000473645 CFTRP13569 1480 aa18.31■□□□□ 0.52
PDCD10-208ENST00000473645 CEP164Q9UPV0 1460 aa18.31■□□□□ 0.52
PDCD10-208ENST00000473645 FANCD2Q9BXW9 1451 aa18.3■□□□□ 0.52
PDCD10-208ENST00000473645 TOP2AP11388 1531 aaKnown RBP18.27■□□□□ 0.52
PDCD10-208ENST00000473645 MAPK8IP2Q13387 824 aaPredicted RBP18.19■□□□□ 0.5
PDCD10-208ENST00000473645 SCAF1Q9H7N4 1312 aaKnown RBP18.16■□□□□ 0.5
PDCD10-208ENST00000473645 URB2Q14146 1524 aaKnown RBP18.15■□□□□ 0.5
PDCD10-208ENST00000473645 CCDC88BA6NC98 1476 aa18.11■□□□□ 0.49
PDCD10-208ENST00000473645 TRIM41Q8WV44 630 aa18.1■□□□□ 0.49
PDCD10-208ENST00000473645 OSCARQ8IYS5 282 aa18.09■□□□□ 0.49
PDCD10-208ENST00000473645 PRDM2Q13029 1718 aa18.04■□□□□ 0.48
PDCD10-208ENST00000473645 DMRT2Q9Y5R5 561 aa18.03■□□□□ 0.48
PDCD10-208ENST00000473645 PPP4R3CPQ6ZMV5 832 aa18■□□□□ 0.47
PDCD10-208ENST00000473645 IFT140Q96RY7 1462 aa17.95■□□□□ 0.46
PDCD10-208ENST00000473645 TOPBP1Q92547 1522 aa17.95■□□□□ 0.46
PDCD10-208ENST00000473645 ZNF608Q9ULD9 1512 aaPredicted RBP17.93■□□□□ 0.46
PDCD10-208ENST00000473645 ABCC8Q09428 1581 aa17.93■□□□□ 0.46
PDCD10-208ENST00000473645 DNMBPQ6XZF7 1577 aa17.86■□□□□ 0.45
PDCD10-208ENST00000473645 AQRO60306 1485 aaKnown RBP eCLIP17.79■□□□□ 0.444e-11■■□□□ 13.7
PDCD10-208ENST00000473645 EIF4G3O43432 1585 aaKnown RBP17.78■□□□□ 0.44
PDCD10-208ENST00000473645 TARBP1Q13395 1621 aaKnown RBP17.77■□□□□ 0.44
PDCD10-208ENST00000473645 POLA1P09884 1462 aaPredicted RBP17.76■□□□□ 0.43
PDCD10-208ENST00000473645 RIMBP3CA6NJZ7 1639 aa17.76■□□□□ 0.43
PDCD10-208ENST00000473645 RIMBP3BA6NNM3 1639 aa17.76■□□□□ 0.43
PDCD10-208ENST00000473645 RIMBP3Q9UFD9 1639 aa17.76■□□□□ 0.43
PDCD10-208ENST00000473645 RAD54L2Q9Y4B4 1467 aa17.71■□□□□ 0.43
PDCD10-208ENST00000473645 SOGA1O94964 1423 aa17.71■□□□□ 0.43
PDCD10-208ENST00000473645 ARHGEF11O15085 1522 aa17.71■□□□□ 0.43
PDCD10-208ENST00000473645 FBLN2P98095 1184 aa17.7■□□□□ 0.42
PDCD10-208ENST00000473645 TDRD9Q8NDG6 1382 aaKnown RBP17.69■□□□□ 0.42
PDCD10-208ENST00000473645 CHD1O14646 1710 aa17.66■□□□□ 0.42
PDCD10-208ENST00000473645 CYB5RLQ6IPT4 315 aa17.66■□□□□ 0.42
PDCD10-208ENST00000473645 FGD5Q6ZNL6 1462 aa17.64■□□□□ 0.41
PDCD10-208ENST00000473645 CUX1P39880 1505 aa17.63■□□□□ 0.41
PDCD10-208ENST00000473645 CNKSR2Q8WXI2 1034 aa17.6■□□□□ 0.41
PDCD10-208ENST00000473645 SUPT5HO00267 1087 aaKnown RBP17.59■□□□□ 0.41
PDCD10-208ENST00000473645 CHMP7Q8WUX9 453 aaPredicted RBP17.57■□□□□ 0.4
PDCD10-208ENST00000473645 WDR97A6NE52 1622 aa17.57■□□□□ 0.4
PDCD10-208ENST00000473645 SNAPC4Q5SXM2 1469 aa17.56■□□□□ 0.4
PDCD10-208ENST00000473645 GRIN2BQ13224 1484 aa17.54■□□□□ 0.4
PDCD10-208ENST00000473645 ARAP1Q96P48 1450 aa17.54■□□□□ 0.4
PDCD10-208ENST00000473645 MAGI1Q96QZ7 1491 aaPredicted RBP17.53■□□□□ 0.4
PDCD10-208ENST00000473645 SYNJ2O15056 1496 aa17.48■□□□□ 0.39
PDCD10-208ENST00000473645 GAPVD1Q14C86 1478 aa17.48■□□□□ 0.39
PDCD10-208ENST00000473645 CLASP1Q7Z460 1538 aa17.47■□□□□ 0.39
PDCD10-208ENST00000473645 HOXD11P31277 338 aaPredicted RBP17.47■□□□□ 0.39
PDCD10-208ENST00000473645 SYNJ1O43426 1573 aa17.46■□□□□ 0.39
PDCD10-208ENST00000473645 TRHP20396 242 aaPredicted RBP17.45■□□□□ 0.38
PDCD10-208ENST00000473645 ABCA10Q8WWZ4 1543 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 119.9 ms