RNA–Protein interactions for RNA: ENST00000473403.5

CRIM1-205, Transcript of cysteine rich transmembrane BMP regulator 1, humanhuman

TSL 3

Gene CRIM1, Length 386 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRIM1-205ENST00000473403 NISCHQ9Y2I1 1504 aa10.25□□□□□ -0.77
CRIM1-205ENST00000473403 AEBP2Q6ZN18 517 aaPredicted RBP9.19□□□□□ -0.94
CRIM1-205ENST00000473403 CCDC180Q9P1Z9 1646 aa8.98□□□□□ -0.97
CRIM1-205ENST00000473403 CHIC1Q5VXU3 224 aa8.68□□□□□ -1.02
CRIM1-205ENST00000473403 ABCC9O60706 1549 aa8.59□□□□□ -1.03
CRIM1-205ENST00000473403 ZCCHC6Q5VYS8 1495 aaKnown RBP8.58□□□□□ -1.04
CRIM1-205ENST00000473403 DCAF1Q9Y4B6 1507 aa8.54□□□□□ -1.04
CRIM1-205ENST00000473403 MYO15BQ96JP2 1530 aa8.54□□□□□ -1.04
CRIM1-205ENST00000473403 NACADO15069 1562 aa8.45□□□□□ -1.06
CRIM1-205ENST00000473403 DCAF8L2P0C7V8 631 aa8.41□□□□□ -1.06
CRIM1-205ENST00000473403 RB1CC1Q8TDY2 1594 aa8.38□□□□□ -1.07
CRIM1-205ENST00000473403 SHROOM4Q9ULL8 1493 aa8.16□□□□□ -1.1
CRIM1-205ENST00000473403 SCRIBQ14160 1630 aa8.15□□□□□ -1.1
CRIM1-205ENST00000473403 BICRAQ9NZM4 1560 aa8.1□□□□□ -1.11
CRIM1-205ENST00000473403 PABPN1Q86U42 306 aaKnown RBP eCLIP8.07□□□□□ -1.12
CRIM1-205ENST00000473403 UNC13AQ9UPW8 1703 aa8.03□□□□□ -1.12
CRIM1-205ENST00000473403 CECR2Q9BXF3 1484 aa7.94□□□□□ -1.14
CRIM1-205ENST00000473403 BAZ1AQ9NRL2 1556 aaPredicted RBP7.93□□□□□ -1.14
CRIM1-205ENST00000473403 RSF1Q96T23 1441 aaPredicted RBP7.9□□□□□ -1.14
CRIM1-205ENST00000473403 EIF4G1Q04637 1599 aaKnown RBP7.88□□□□□ -1.15
CRIM1-205ENST00000473403 MROH2BQ7Z745 1585 aa7.87□□□□□ -1.15
CRIM1-205ENST00000473403 SMARCA4P51532 1647 aa7.86□□□□□ -1.15
CRIM1-205ENST00000473403 PEG3Q9GZU2 1588 aa7.85□□□□□ -1.15
CRIM1-205ENST00000473403 NCAPD3P42695 1498 aa7.84□□□□□ -1.15
CRIM1-205ENST00000473403 ATAD2BQ9ULI0 1458 aa7.83□□□□□ -1.16
CRIM1-205ENST00000473403 SMARCA2P51531 1590 aa7.82□□□□□ -1.16
CRIM1-205ENST00000473403 HMGXB3Q12766 1538 aa7.78□□□□□ -1.16
CRIM1-205ENST00000473403 SUPT5HO00267 1087 aaKnown RBP7.77□□□□□ -1.17
CRIM1-205ENST00000473403 CC2D2AQ9P2K1 1620 aa7.77□□□□□ -1.17
CRIM1-205ENST00000473403 DNAJC5BQ9UF47 199 aa7.75□□□□□ -1.17
CRIM1-205ENST00000473403 BAZ1BQ9UIG0 1483 aaKnown RBP7.75□□□□□ -1.17
CRIM1-205ENST00000473403 TOP2AP11388 1531 aaKnown RBP7.74□□□□□ -1.17
CRIM1-205ENST00000473403 WIZO95785 1651 aa7.73□□□□□ -1.17
CRIM1-205ENST00000473403 SENP3Q9H4L4 574 aaPredicted RBP7.72□□□□□ -1.17
CRIM1-205ENST00000473403 PHF23Q9BUL5 403 aaPredicted RBP7.67□□□□□ -1.18
CRIM1-205ENST00000473403 CCDC88BA6NC98 1476 aa7.64□□□□□ -1.19
CRIM1-205ENST00000473403 CADPSQ9ULU8 1353 aa7.6□□□□□ -1.19
CRIM1-205ENST00000473403 CFTRP13569 1480 aa7.6□□□□□ -1.19
CRIM1-205ENST00000473403 LAMC3Q9Y6N6 1575 aa7.54□□□□□ -1.2
CRIM1-205ENST00000473403 PDS5BQ9NTI5 1447 aa7.52□□□□□ -1.21
CRIM1-205ENST00000473403 NESP48681 1621 aa7.49□□□□□ -1.21
CRIM1-205ENST00000473403 FANCD2Q9BXW9 1451 aa7.48□□□□□ -1.21
CRIM1-205ENST00000473403 CEP164Q9UPV0 1460 aa7.44□□□□□ -1.22
CRIM1-205ENST00000473403 WRNQ14191 1432 aaPredicted RBP eCLIP7.44□□□□□ -1.22
CRIM1-205ENST00000473403 ABCC8Q09428 1581 aa7.43□□□□□ -1.22
CRIM1-205ENST00000473403 ERCC6Q03468 1493 aa7.41□□□□□ -1.22
CRIM1-205ENST00000473403 MRC2Q9UBG0 1479 aa7.41□□□□□ -1.22
CRIM1-205ENST00000473403 PRDM2Q13029 1718 aa7.38□□□□□ -1.23
CRIM1-205ENST00000473403 URB2Q14146 1524 aaKnown RBP7.37□□□□□ -1.23
CRIM1-205ENST00000473403 TRIM41Q8WV44 630 aa7.37□□□□□ -1.23
CRIM1-205ENST00000473403 DNMBPQ6XZF7 1577 aa7.37□□□□□ -1.23
CRIM1-205ENST00000473403 WDR62O43379 1518 aa7.37□□□□□ -1.23
CRIM1-205ENST00000473403 CUX1P39880 1505 aa7.37□□□□□ -1.23
CRIM1-205ENST00000473403 TOPBP1Q92547 1522 aa7.37□□□□□ -1.23
CRIM1-205ENST00000473403 TOP2BQ02880 1626 aa7.36□□□□□ -1.23
CRIM1-205ENST00000473403 SYNJ1O43426 1573 aa7.33□□□□□ -1.24
CRIM1-205ENST00000473403 POLA1P09884 1462 aaPredicted RBP7.33□□□□□ -1.24
CRIM1-205ENST00000473403 BIVM-ERCC5R4GMW8 1640 aa7.33□□□□□ -1.24
CRIM1-205ENST00000473403 THOC2Q8NI27 1593 aaKnown RBP7.33□□□□□ -1.24
CRIM1-205ENST00000473403 KIF21AQ7Z4S6 1674 aa7.32□□□□□ -1.24
CRIM1-205ENST00000473403 FGD5Q6ZNL6 1462 aa7.32□□□□□ -1.24
CRIM1-205ENST00000473403 CUX2O14529 1486 aa7.31□□□□□ -1.24
CRIM1-205ENST00000473403 IFT140Q96RY7 1462 aa7.31□□□□□ -1.24
CRIM1-205ENST00000473403 SOGA1O94964 1423 aa7.31□□□□□ -1.24
CRIM1-205ENST00000473403 ABCA10Q8WWZ4 1543 aa7.3□□□□□ -1.24
CRIM1-205ENST00000473403 EEA1Q15075 1411 aa7.29□□□□□ -1.24
CRIM1-205ENST00000473403 KIF27Q86VH2 1401 aa7.27□□□□□ -1.24
CRIM1-205ENST00000473403 RAD54L2Q9Y4B4 1467 aa7.26□□□□□ -1.25
CRIM1-205ENST00000473403 FOXD1Q16676 465 aa7.26□□□□□ -1.25
CRIM1-205ENST00000473403 WDR97A6NE52 1622 aa7.26□□□□□ -1.25
CRIM1-205ENST00000473403 TARBP1Q13395 1621 aaKnown RBP7.25□□□□□ -1.25
CRIM1-205ENST00000473403 IGF1RP08069 1367 aa7.23□□□□□ -1.25
CRIM1-205ENST00000473403 TDRD9Q8NDG6 1382 aaKnown RBP7.23□□□□□ -1.25
CRIM1-205ENST00000473403 CSRNP3Q8WYN3 585 aa7.23□□□□□ -1.25
CRIM1-205ENST00000473403 GAPVD1Q14C86 1478 aa7.22□□□□□ -1.25
CRIM1-205ENST00000473403 GRIN2BQ13224 1484 aa7.21□□□□□ -1.26
CRIM1-205ENST00000473403 ERICH3Q5RHP9 1530 aa7.21□□□□□ -1.26
CRIM1-205ENST00000473403 ZNF608Q9ULD9 1512 aaPredicted RBP7.21□□□□□ -1.26
CRIM1-205ENST00000473403 AQRO60306 1485 aaKnown RBP eCLIP7.2□□□□□ -1.26
CRIM1-205ENST00000473403 ABCA5Q8WWZ7 1642 aa7.19□□□□□ -1.26
CRIM1-205ENST00000473403 PRXQ9BXM0 1461 aa7.19□□□□□ -1.26
CRIM1-205ENST00000473403 RUSC2Q8N2Y8 1516 aa7.19□□□□□ -1.26
CRIM1-205ENST00000473403 FHAD1B1AJZ9 1412 aa7.18□□□□□ -1.26
CRIM1-205ENST00000473403 MAGI1Q96QZ7 1491 aaPredicted RBP7.17□□□□□ -1.26
CRIM1-205ENST00000473403 CARMIL1Q5VZK9 1371 aa7.17□□□□□ -1.26
CRIM1-205ENST00000473403 EIF4G3O43432 1585 aaKnown RBP7.16□□□□□ -1.26
CRIM1-205ENST00000473403 RAPGEF2Q9Y4G8 1499 aa7.15□□□□□ -1.27
CRIM1-205ENST00000473403 SYNJ2O15056 1496 aa7.14□□□□□ -1.27
CRIM1-205ENST00000473403 FAM9AQ8IZU1 332 aaPredicted RBP7.14□□□□□ -1.27
CRIM1-205ENST00000473403 SNAPC4Q5SXM2 1469 aa7.13□□□□□ -1.27
CRIM1-205ENST00000473403 CUL7Q14999 1698 aa7.12□□□□□ -1.27
CRIM1-205ENST00000473403 GOLGA3Q08378 1498 aa7.12□□□□□ -1.27
CRIM1-205ENST00000473403 KIF21BO75037 1637 aa7.12□□□□□ -1.27
CRIM1-205ENST00000473403 CHMP7Q8WUX9 453 aaPredicted RBP7.11□□□□□ -1.27
CRIM1-205ENST00000473403 ADAMTS12P58397 1594 aa7.11□□□□□ -1.27
CRIM1-205ENST00000473403 GRIN2AQ12879 1464 aa7.11□□□□□ -1.27
CRIM1-205ENST00000473403 TNIKQ9UKE5 1360 aa7.1□□□□□ -1.27
CRIM1-205ENST00000473403 NUP160Q12769 1436 aa7.1□□□□□ -1.27
CRIM1-205ENST00000473403 KIAA0586Q9BVV6 1533 aa7.07□□□□□ -1.28
CRIM1-205ENST00000473403 PBRM1Q86U86 1689 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms