RNA–Protein interactions for RNA: ENST00000473391.1

REPIN1-207, Transcript of replication initiator 1, humanhuman

TSL 2

Gene REPIN1, Length 1,064 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
REPIN1-207ENST00000473391 NISCHQ9Y2I1 1504 aa51.14■■■■■ 5.78
REPIN1-207ENST00000473391 ABCC9O60706 1549 aa46.3■■■■■ 5
REPIN1-207ENST00000473391 CCDC180Q9P1Z9 1646 aa46.06■■■■■ 4.96
REPIN1-207ENST00000473391 RB1CC1Q8TDY2 1594 aa43.93■■■■■ 4.62
REPIN1-207ENST00000473391 DNAJC5BQ9UF47 199 aa43.76■■■■■ 4.6
REPIN1-207ENST00000473391 NACADO15069 1562 aa43.56■■■■■ 4.56
REPIN1-207ENST00000473391 DCAF8L2P0C7V8 631 aa43.14■■■■■ 4.5
REPIN1-207ENST00000473391 UNC13AQ9UPW8 1703 aa43.14■■■■■ 4.5
REPIN1-207ENST00000473391 PABPN1Q86U42 306 aaKnown RBP eCLIP43.02■■■■■ 4.48
REPIN1-207ENST00000473391 MYO15BQ96JP2 1530 aa42.87■■■■■ 4.45
REPIN1-207ENST00000473391 BICRAQ9NZM4 1560 aa42.78■■■■■ 4.44
REPIN1-207ENST00000473391 ZCCHC6Q5VYS8 1495 aaKnown RBP42.33■■■■■ 4.37
REPIN1-207ENST00000473391 DCAF1Q9Y4B6 1507 aa42.22■■■■■ 4.35
REPIN1-207ENST00000473391 SHROOM4Q9ULL8 1493 aa42.04■■■■■ 4.32
REPIN1-207ENST00000473391 SCRIBQ14160 1630 aa41.93■■■■■ 4.3
REPIN1-207ENST00000473391 CC2D2AQ9P2K1 1620 aa41.86■■■■■ 4.29
REPIN1-207ENST00000473391 CECR2Q9BXF3 1484 aa41.72■■■■■ 4.27
REPIN1-207ENST00000473391 EIF4G1Q04637 1599 aaKnown RBP41.68■■■■■ 4.26
REPIN1-207ENST00000473391 DNAJC5Q9H3Z4 198 aa40.32■■■■■ 4.05
REPIN1-207ENST00000473391 NCAPD3P42695 1498 aa40.22■■■■■ 4.03
REPIN1-207ENST00000473391 ATAD2BQ9ULI0 1458 aa40.07■■■■■ 4
REPIN1-207ENST00000473391 CUX2O14529 1486 aa40■■■■□ 3.99
REPIN1-207ENST00000473391 SMARCA4P51532 1647 aa39.99■■■■□ 3.99
REPIN1-207ENST00000473391 ERCC6Q03468 1493 aa39.92■■■■□ 3.98
REPIN1-207ENST00000473391 HMGXB3Q12766 1538 aa39.91■■■■□ 3.98
REPIN1-207ENST00000473391 SMARCA2P51531 1590 aa39.91■■■■□ 3.98
REPIN1-207ENST00000473391 NESP48681 1621 aa39.74■■■■□ 3.95
REPIN1-207ENST00000473391 BAZ1AQ9NRL2 1556 aaPredicted RBP39.69■■■■□ 3.94
REPIN1-207ENST00000473391 BAZ1BQ9UIG0 1483 aaKnown RBP39.62■■■■□ 3.93
REPIN1-207ENST00000473391 PEG3Q9GZU2 1588 aa39.61■■■■□ 3.93
REPIN1-207ENST00000473391 MROH2BQ7Z745 1585 aa39.43■■■■□ 3.9
REPIN1-207ENST00000473391 THOC2Q8NI27 1593 aaKnown RBP39.42■■■■□ 3.9
REPIN1-207ENST00000473391 LAMC3Q9Y6N6 1575 aa39.37■■■■□ 3.89
REPIN1-207ENST00000473391 KIF21AQ7Z4S6 1674 aa39.28■■■■□ 3.88
REPIN1-207ENST00000473391 PDS5BQ9NTI5 1447 aa39.07■■■■□ 3.85
REPIN1-207ENST00000473391 WIZO95785 1651 aa38.97■■■■□ 3.83
REPIN1-207ENST00000473391 CADPSQ9ULU8 1353 aa38.95■■■■□ 3.83
REPIN1-207ENST00000473391 MRC2Q9UBG0 1479 aa38.81■■■■□ 3.8
REPIN1-207ENST00000473391 WDR62O43379 1518 aa38.77■■■■□ 3.8
REPIN1-207ENST00000473391 CEP164Q9UPV0 1460 aa38.58■■■■□ 3.77
REPIN1-207ENST00000473391 FANCD2Q9BXW9 1451 aa38.53■■■■□ 3.76
REPIN1-207ENST00000473391 CFTRP13569 1480 aa38.48■■■■□ 3.75
REPIN1-207ENST00000473391 RSF1Q96T23 1441 aaPredicted RBP38.47■■■■□ 3.75
REPIN1-207ENST00000473391 TOP2AP11388 1531 aaKnown RBP38.4■■■■□ 3.74
REPIN1-207ENST00000473391 TRIM41Q8WV44 630 aa38.37■■■■□ 3.73
REPIN1-207ENST00000473391 URB2Q14146 1524 aaKnown RBP38.29■■■■□ 3.72
REPIN1-207ENST00000473391 PRDM2Q13029 1718 aa38.19■■■■□ 3.7
REPIN1-207ENST00000473391 OSCARQ8IYS5 282 aa38.06■■■■□ 3.68
REPIN1-207ENST00000473391 CCDC88BA6NC98 1476 aa37.96■■■■□ 3.67
REPIN1-207ENST00000473391 ZNF608Q9ULD9 1512 aaPredicted RBP37.87■■■■□ 3.65
REPIN1-207ENST00000473391 IFT140Q96RY7 1462 aa37.82■■■■□ 3.64
REPIN1-207ENST00000473391 TOPBP1Q92547 1522 aa37.8■■■■□ 3.64
REPIN1-207ENST00000473391 RIMBP3CA6NJZ7 1639 aa37.74■■■■□ 3.63
REPIN1-207ENST00000473391 RIMBP3BA6NNM3 1639 aa37.74■■■■□ 3.63
REPIN1-207ENST00000473391 RIMBP3Q9UFD9 1639 aa37.74■■■■□ 3.63
REPIN1-207ENST00000473391 EIF4G3O43432 1585 aaKnown RBP37.65■■■■□ 3.62
REPIN1-207ENST00000473391 DNMBPQ6XZF7 1577 aa37.63■■■■□ 3.62
REPIN1-207ENST00000473391 ABCC8Q09428 1581 aa37.62■■■■□ 3.61
REPIN1-207ENST00000473391 ARHGEF11O15085 1522 aa37.56■■■■□ 3.6
REPIN1-207ENST00000473391 TARBP1Q13395 1621 aaKnown RBP37.54■■■■□ 3.6
REPIN1-207ENST00000473391 CHD1O14646 1710 aa37.48■■■■□ 3.59
REPIN1-207ENST00000473391 AQRO60306 1485 aaKnown RBP eCLIP37.44■■■■□ 3.586e-14■■■■■ 61.6
REPIN1-207ENST00000473391 POLA1P09884 1462 aaPredicted RBP37.39■■■■□ 3.58
REPIN1-207ENST00000473391 RAD54L2Q9Y4B4 1467 aa37.26■■■■□ 3.56
REPIN1-207ENST00000473391 CYB5RLQ6IPT4 315 aa37.21■■■■□ 3.55
REPIN1-207ENST00000473391 ARAP1Q96P48 1450 aa37.18■■■■□ 3.54
REPIN1-207ENST00000473391 SOGA1O94964 1423 aa37.16■■■■□ 3.54
REPIN1-207ENST00000473391 TDRD9Q8NDG6 1382 aaKnown RBP37.15■■■■□ 3.54
REPIN1-207ENST00000473391 FBLN2P98095 1184 aa37.14■■■■□ 3.54
REPIN1-207ENST00000473391 FGD5Q6ZNL6 1462 aa37.11■■■■□ 3.53
REPIN1-207ENST00000473391 CUX1P39880 1505 aa37.06■■■■□ 3.52
REPIN1-207ENST00000473391 WDR97A6NE52 1622 aa37.06■■■■□ 3.52
REPIN1-207ENST00000473391 SNAPC4Q5SXM2 1469 aa37.05■■■■□ 3.52
REPIN1-207ENST00000473391 CLASP1Q7Z460 1538 aa37■■■■□ 3.51
REPIN1-207ENST00000473391 MAGI1Q96QZ7 1491 aaPredicted RBP36.92■■■■□ 3.5
REPIN1-207ENST00000473391 GRIN2BQ13224 1484 aa36.88■■■■□ 3.49
REPIN1-207ENST00000473391 SYNJ1O43426 1573 aa36.87■■■■□ 3.49
REPIN1-207ENST00000473391 TRHP20396 242 aaPredicted RBP36.84■■■■□ 3.49
REPIN1-207ENST00000473391 CHMP7Q8WUX9 453 aaPredicted RBP36.83■■■■□ 3.49
REPIN1-207ENST00000473391 PBRM1Q86U86 1689 aa36.83■■■■□ 3.49
REPIN1-207ENST00000473391 SYNJ2O15056 1496 aa36.81■■■■□ 3.48
REPIN1-207ENST00000473391 GAPVD1Q14C86 1478 aa36.72■■■■□ 3.47
REPIN1-207ENST00000473391 ABCA5Q8WWZ7 1642 aa36.7■■■■□ 3.47
REPIN1-207ENST00000473391 ABCA10Q8WWZ4 1543 aa36.66■■■■□ 3.46
REPIN1-207ENST00000473391 SUPT5HO00267 1087 aaKnown RBP36.44■■■■□ 3.42
REPIN1-207ENST00000473391 ERCC6L2Q5T890 1561 aa36.44■■■■□ 3.42
REPIN1-207ENST00000473391 GRIN2AQ12879 1464 aa36.43■■■■□ 3.42
REPIN1-207ENST00000473391 ADAMTS12P58397 1594 aa36.42■■■■□ 3.42
REPIN1-207ENST00000473391 BIVM-ERCC5R4GMW8 1640 aa36.41■■■■□ 3.42
REPIN1-207ENST00000473391 WRNQ14191 1432 aaPredicted RBP eCLIP36.39■■■■□ 3.42
REPIN1-207ENST00000473391 TOP2BQ02880 1626 aa36.37■■■■□ 3.41
REPIN1-207ENST00000473391 CEP170Q5SW79 1584 aa36.37■■■■□ 3.41
REPIN1-207ENST00000473391 NUP160Q12769 1436 aa36.34■■■■□ 3.41
REPIN1-207ENST00000473391 SHROOM2Q13796 1616 aa36.27■■■■□ 3.4
REPIN1-207ENST00000473391 FHAD1B1AJZ9 1412 aa36.23■■■■□ 3.39
REPIN1-207ENST00000473391 ERICH3Q5RHP9 1530 aa36.19■■■■□ 3.38
REPIN1-207ENST00000473391 KIF13AQ9H1H9 1805 aa36.01■■■■□ 3.36
REPIN1-207ENST00000473391 PRG4Q92954 1404 aaPredicted RBP35.97■■■■□ 3.35
REPIN1-207ENST00000473391 AEBP2Q6ZN18 517 aaPredicted RBP35.94■■■■□ 3.34
REPIN1-207ENST00000473391 RUSC2Q8N2Y8 1516 aa35.93■■■■□ 3.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms