RNA–Protein interactions for RNA: ENST00000473273.1

TRMT11-208, Transcript of tRNA methyltransferase 11 homolog, humanhuman

TSL 5

Gene TRMT11, Length 258 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT11-208ENST00000473273 NISCHQ9Y2I1 1504 aa18.05■□□□□ 0.48
TRMT11-208ENST00000473273 CCDC180Q9P1Z9 1646 aa15.97■□□□□ 0.15
TRMT11-208ENST00000473273 ZCCHC6Q5VYS8 1495 aaKnown RBP15.14■□□□□ 0.01
TRMT11-208ENST00000473273 ABCC9O60706 1549 aa15.14■□□□□ 0.01
TRMT11-208ENST00000473273 DCAF1Q9Y4B6 1507 aa14.96□□□□□ -0.02
TRMT11-208ENST00000473273 DCAF8L2P0C7V8 631 aa14.93□□□□□ -0.02
TRMT11-208ENST00000473273 AEBP2Q6ZN18 517 aaPredicted RBP14.91□□□□□ -0.02
TRMT11-208ENST00000473273 MYO15BQ96JP2 1530 aa14.86□□□□□ -0.03
TRMT11-208ENST00000473273 NACADO15069 1562 aa14.85□□□□□ -0.03
TRMT11-208ENST00000473273 RB1CC1Q8TDY2 1594 aa14.81□□□□□ -0.04
TRMT11-208ENST00000473273 CHIC1Q5VXU3 224 aa14.63□□□□□ -0.07
TRMT11-208ENST00000473273 SCRIBQ14160 1630 aa14.59□□□□□ -0.07
TRMT11-208ENST00000473273 SHROOM4Q9ULL8 1493 aa14.54□□□□□ -0.08
TRMT11-208ENST00000473273 UNC13AQ9UPW8 1703 aa14.49□□□□□ -0.09
TRMT11-208ENST00000473273 BICRAQ9NZM4 1560 aa14.25□□□□□ -0.13
TRMT11-208ENST00000473273 PABPN1Q86U42 306 aaKnown RBP eCLIP14.15□□□□□ -0.14
TRMT11-208ENST00000473273 BAZ1AQ9NRL2 1556 aaPredicted RBP14.02□□□□□ -0.16
TRMT11-208ENST00000473273 CECR2Q9BXF3 1484 aa13.97□□□□□ -0.17
TRMT11-208ENST00000473273 SMARCA4P51532 1647 aa13.97□□□□□ -0.17
TRMT11-208ENST00000473273 MROH2BQ7Z745 1585 aa13.9□□□□□ -0.18
TRMT11-208ENST00000473273 EIF4G1Q04637 1599 aaKnown RBP13.89□□□□□ -0.19
TRMT11-208ENST00000473273 SUPT5HO00267 1087 aaKnown RBP13.88□□□□□ -0.19
TRMT11-208ENST00000473273 RSF1Q96T23 1441 aaPredicted RBP13.87□□□□□ -0.19
TRMT11-208ENST00000473273 WIZO95785 1651 aa13.83□□□□□ -0.2
TRMT11-208ENST00000473273 SMARCA2P51531 1590 aa13.79□□□□□ -0.2
TRMT11-208ENST00000473273 PEG3Q9GZU2 1588 aa13.79□□□□□ -0.2
TRMT11-208ENST00000473273 CC2D2AQ9P2K1 1620 aa13.74□□□□□ -0.21
TRMT11-208ENST00000473273 TOP2AP11388 1531 aaKnown RBP13.72□□□□□ -0.21
TRMT11-208ENST00000473273 ATAD2BQ9ULI0 1458 aa13.72□□□□□ -0.21
TRMT11-208ENST00000473273 BAZ1BQ9UIG0 1483 aaKnown RBP13.7□□□□□ -0.22
TRMT11-208ENST00000473273 HMGXB3Q12766 1538 aa13.69□□□□□ -0.22
TRMT11-208ENST00000473273 NCAPD3P42695 1498 aa13.63□□□□□ -0.23
TRMT11-208ENST00000473273 CCDC88BA6NC98 1476 aa13.49□□□□□ -0.25
TRMT11-208ENST00000473273 PRDM2Q13029 1718 aa13.39□□□□□ -0.27
TRMT11-208ENST00000473273 DNAJC5BQ9UF47 199 aa13.35□□□□□ -0.27
TRMT11-208ENST00000473273 LAMC3Q9Y6N6 1575 aa13.3□□□□□ -0.28
TRMT11-208ENST00000473273 CFTRP13569 1480 aa13.28□□□□□ -0.28
TRMT11-208ENST00000473273 CADPSQ9ULU8 1353 aa13.27□□□□□ -0.29
TRMT11-208ENST00000473273 NESP48681 1621 aa13.2□□□□□ -0.3
TRMT11-208ENST00000473273 ABCC8Q09428 1581 aa13.18□□□□□ -0.3
TRMT11-208ENST00000473273 PDS5BQ9NTI5 1447 aa13.16□□□□□ -0.3
TRMT11-208ENST00000473273 FANCD2Q9BXW9 1451 aa13.16□□□□□ -0.3
TRMT11-208ENST00000473273 KIF21AQ7Z4S6 1674 aa13.15□□□□□ -0.31
TRMT11-208ENST00000473273 CEP164Q9UPV0 1460 aa13.14□□□□□ -0.31
TRMT11-208ENST00000473273 WRNQ14191 1432 aaPredicted RBP eCLIP13.13□□□□□ -0.31
TRMT11-208ENST00000473273 TRIM41Q8WV44 630 aa13.1□□□□□ -0.31
TRMT11-208ENST00000473273 BIVM-ERCC5R4GMW8 1640 aa13.1□□□□□ -0.31
TRMT11-208ENST00000473273 ERCC6Q03468 1493 aa13.09□□□□□ -0.31
TRMT11-208ENST00000473273 SYNJ1O43426 1573 aa13.08□□□□□ -0.32
TRMT11-208ENST00000473273 TOP2BQ02880 1626 aa13.08□□□□□ -0.32
TRMT11-208ENST00000473273 DNMBPQ6XZF7 1577 aa13.05□□□□□ -0.32
TRMT11-208ENST00000473273 CUX1P39880 1505 aa13.03□□□□□ -0.32
TRMT11-208ENST00000473273 MRC2Q9UBG0 1479 aa13.02□□□□□ -0.33
TRMT11-208ENST00000473273 TOPBP1Q92547 1522 aa12.99□□□□□ -0.33
TRMT11-208ENST00000473273 THOC2Q8NI27 1593 aaKnown RBP12.98□□□□□ -0.33
TRMT11-208ENST00000473273 URB2Q14146 1524 aaKnown RBP12.97□□□□□ -0.33
TRMT11-208ENST00000473273 WDR62O43379 1518 aa12.96□□□□□ -0.33
TRMT11-208ENST00000473273 FGD5Q6ZNL6 1462 aa12.95□□□□□ -0.34
TRMT11-208ENST00000473273 POLA1P09884 1462 aaPredicted RBP12.9□□□□□ -0.34
TRMT11-208ENST00000473273 EEA1Q15075 1411 aa12.88□□□□□ -0.35
TRMT11-208ENST00000473273 WDR97A6NE52 1622 aa12.88□□□□□ -0.35
TRMT11-208ENST00000473273 SOGA1O94964 1423 aa12.85□□□□□ -0.35
TRMT11-208ENST00000473273 PHF23Q9BUL5 403 aaPredicted RBP12.84□□□□□ -0.35
TRMT11-208ENST00000473273 ABCA10Q8WWZ4 1543 aa12.83□□□□□ -0.35
TRMT11-208ENST00000473273 KIF27Q86VH2 1401 aa12.83□□□□□ -0.36
TRMT11-208ENST00000473273 CUX2O14529 1486 aa12.83□□□□□ -0.36
TRMT11-208ENST00000473273 TARBP1Q13395 1621 aaKnown RBP12.82□□□□□ -0.36
TRMT11-208ENST00000473273 FAM9AQ8IZU1 332 aaPredicted RBP12.82□□□□□ -0.36
TRMT11-208ENST00000473273 IFT140Q96RY7 1462 aa12.82□□□□□ -0.36
TRMT11-208ENST00000473273 RAD54L2Q9Y4B4 1467 aa12.82□□□□□ -0.36
TRMT11-208ENST00000473273 ABCA5Q8WWZ7 1642 aa12.78□□□□□ -0.36
TRMT11-208ENST00000473273 PBRM1Q86U86 1689 aa12.78□□□□□ -0.36
TRMT11-208ENST00000473273 RUSC2Q8N2Y8 1516 aa12.77□□□□□ -0.37
TRMT11-208ENST00000473273 CUL7Q14999 1698 aa12.74□□□□□ -0.37
TRMT11-208ENST00000473273 KIF21BO75037 1637 aa12.74□□□□□ -0.37
TRMT11-208ENST00000473273 EIF4G3O43432 1585 aaKnown RBP12.74□□□□□ -0.37
TRMT11-208ENST00000473273 GAPVD1Q14C86 1478 aa12.73□□□□□ -0.37
TRMT11-208ENST00000473273 CSRNP3Q8WYN3 585 aa12.72□□□□□ -0.37
TRMT11-208ENST00000473273 ERICH3Q5RHP9 1530 aa12.71□□□□□ -0.38
TRMT11-208ENST00000473273 SENP3Q9H4L4 574 aaPredicted RBP12.7□□□□□ -0.38
TRMT11-208ENST00000473273 TDRD9Q8NDG6 1382 aaKnown RBP12.69□□□□□ -0.38
TRMT11-208ENST00000473273 GOLGA3Q08378 1498 aa12.69□□□□□ -0.38
TRMT11-208ENST00000473273 ZNF608Q9ULD9 1512 aaPredicted RBP12.67□□□□□ -0.38
TRMT11-208ENST00000473273 GRIN2BQ13224 1484 aa12.67□□□□□ -0.38
TRMT11-208ENST00000473273 AQRO60306 1485 aaKnown RBP eCLIP12.65□□□□□ -0.381e-6■□□□□ 8
TRMT11-208ENST00000473273 ADAMTS12P58397 1594 aa12.65□□□□□ -0.38
TRMT11-208ENST00000473273 EHMT2Q96KQ7 1210 aa12.64□□□□□ -0.39
TRMT11-208ENST00000473273 IGF1RP08069 1367 aa12.63□□□□□ -0.39
TRMT11-208ENST00000473273 PRXQ9BXM0 1461 aa12.63□□□□□ -0.39
TRMT11-208ENST00000473273 RAPGEF2Q9Y4G8 1499 aa12.63□□□□□ -0.39
TRMT11-208ENST00000473273 CARMIL1Q5VZK9 1371 aa12.62□□□□□ -0.39
TRMT11-208ENST00000473273 SNAPC4Q5SXM2 1469 aa12.61□□□□□ -0.39
TRMT11-208ENST00000473273 MAGI1Q96QZ7 1491 aaPredicted RBP12.61□□□□□ -0.39
TRMT11-208ENST00000473273 CTTNBP2Q8WZ74 1663 aa12.6□□□□□ -0.39
TRMT11-208ENST00000473273 UBTFP17480 764 aaKnown RBP12.59□□□□□ -0.39
TRMT11-208ENST00000473273 FHAD1B1AJZ9 1412 aa12.59□□□□□ -0.39
TRMT11-208ENST00000473273 LOC105371045A0A1W2PR82 267 aa12.58□□□□□ -0.4
TRMT11-208ENST00000473273 TNIKQ9UKE5 1360 aa12.55□□□□□ -0.4
TRMT11-208ENST00000473273 SYNJ2O15056 1496 aa12.54□□□□□ -0.4
TRMT11-208ENST00000473273 CHD1O14646 1710 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms