RNA–Protein interactions for RNA: ENST00000473022.1

MYH9-207, Transcript of myosin heavy chain 9, humanhuman

TSL 2

Gene MYH9, Length 400 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MYH9-207ENST00000473022 NISCHQ9Y2I1 1504 aa27.38■■□□□ 1.97
MYH9-207ENST00000473022 CCDC180Q9P1Z9 1646 aa24.51■■□□□ 1.51
MYH9-207ENST00000473022 ABCC9O60706 1549 aa24.25■■□□□ 1.47
MYH9-207ENST00000473022 RB1CC1Q8TDY2 1594 aa23.22■■□□□ 1.31
MYH9-207ENST00000473022 NACADO15069 1562 aa23.11■■□□□ 1.29
MYH9-207ENST00000473022 DCAF8L2P0C7V8 631 aa23.03■■□□□ 1.28
MYH9-207ENST00000473022 MYO15BQ96JP2 1530 aa22.86■■□□□ 1.25
MYH9-207ENST00000473022 ZCCHC6Q5VYS8 1495 aaKnown RBP22.74■■□□□ 1.23
MYH9-207ENST00000473022 UNC13AQ9UPW8 1703 aa22.7■■□□□ 1.22
MYH9-207ENST00000473022 DCAF1Q9Y4B6 1507 aa22.65■■□□□ 1.22
MYH9-207ENST00000473022 PABPN1Q86U42 306 aaKnown RBP eCLIP22.61■■□□□ 1.21
MYH9-207ENST00000473022 DNAJC5BQ9UF47 199 aa22.51■■□□□ 1.19
MYH9-207ENST00000473022 BICRAQ9NZM4 1560 aa22.49■■□□□ 1.19
MYH9-207ENST00000473022 SCRIBQ14160 1630 aa22.32■■□□□ 1.16
MYH9-207ENST00000473022 SHROOM4Q9ULL8 1493 aa22.26■■□□□ 1.15
MYH9-207ENST00000473022 EIF4G1Q04637 1599 aaKnown RBP21.95■■□□□ 1.1
MYH9-207ENST00000473022 CC2D2AQ9P2K1 1620 aa21.94■■□□□ 1.1
MYH9-207ENST00000473022 CECR2Q9BXF3 1484 aa21.83■■□□□ 1.09
MYH9-207ENST00000473022 SMARCA4P51532 1647 aa21.33■■□□□ 1
MYH9-207ENST00000473022 NCAPD3P42695 1498 aa21.31■■□□□ 1
MYH9-207ENST00000473022 ATAD2BQ9ULI0 1458 aa21.28■■□□□ 1
MYH9-207ENST00000473022 BAZ1AQ9NRL2 1556 aaPredicted RBP21.27■□□□□ 0.99
MYH9-207ENST00000473022 SMARCA2P51531 1590 aa21.26■□□□□ 0.99
MYH9-207ENST00000473022 HMGXB3Q12766 1538 aa21.19■□□□□ 0.98
MYH9-207ENST00000473022 PEG3Q9GZU2 1588 aa21.12■□□□□ 0.97
MYH9-207ENST00000473022 BAZ1BQ9UIG0 1483 aaKnown RBP21.1■□□□□ 0.97
MYH9-207ENST00000473022 MROH2BQ7Z745 1585 aa21.09■□□□□ 0.97
MYH9-207ENST00000473022 ERCC6Q03468 1493 aa20.95■□□□□ 0.94
MYH9-207ENST00000473022 NESP48681 1621 aa20.89■□□□□ 0.93
MYH9-207ENST00000473022 WIZO95785 1651 aa20.87■□□□□ 0.93
MYH9-207ENST00000473022 CUX2O14529 1486 aa20.83■□□□□ 0.93
MYH9-207ENST00000473022 LAMC3Q9Y6N6 1575 aa20.82■□□□□ 0.92
MYH9-207ENST00000473022 RSF1Q96T23 1441 aaPredicted RBP20.73■□□□□ 0.91
MYH9-207ENST00000473022 PDS5BQ9NTI5 1447 aa20.69■□□□□ 0.9
MYH9-207ENST00000473022 CADPSQ9ULU8 1353 aa20.68■□□□□ 0.9
MYH9-207ENST00000473022 KIF21AQ7Z4S6 1674 aa20.67■□□□□ 0.9
MYH9-207ENST00000473022 THOC2Q8NI27 1593 aaKnown RBP20.65■□□□□ 0.9
MYH9-207ENST00000473022 TOP2AP11388 1531 aaKnown RBP20.63■□□□□ 0.89
MYH9-207ENST00000473022 DNAJC5Q9H3Z4 198 aa20.54■□□□□ 0.88
MYH9-207ENST00000473022 CFTRP13569 1480 aa20.49■□□□□ 0.87
MYH9-207ENST00000473022 MRC2Q9UBG0 1479 aa20.49■□□□□ 0.87
MYH9-207ENST00000473022 CEP164Q9UPV0 1460 aa20.46■□□□□ 0.87
MYH9-207ENST00000473022 FANCD2Q9BXW9 1451 aa20.44■□□□□ 0.86
MYH9-207ENST00000473022 WDR62O43379 1518 aa20.43■□□□□ 0.86
MYH9-207ENST00000473022 CCDC88BA6NC98 1476 aa20.37■□□□□ 0.85
MYH9-207ENST00000473022 PRDM2Q13029 1718 aa20.36■□□□□ 0.85
MYH9-207ENST00000473022 URB2Q14146 1524 aaKnown RBP20.25■□□□□ 0.83
MYH9-207ENST00000473022 ABCC8Q09428 1581 aa20.08■□□□□ 0.81
MYH9-207ENST00000473022 TOPBP1Q92547 1522 aa20.08■□□□□ 0.81
MYH9-207ENST00000473022 IFT140Q96RY7 1462 aa20.05■□□□□ 0.8
MYH9-207ENST00000473022 DNMBPQ6XZF7 1577 aa20.04■□□□□ 0.8
MYH9-207ENST00000473022 SUPT5HO00267 1087 aaKnown RBP20■□□□□ 0.79
MYH9-207ENST00000473022 ZNF608Q9ULD9 1512 aaPredicted RBP19.96■□□□□ 0.79
MYH9-207ENST00000473022 OSCARQ8IYS5 282 aa19.92■□□□□ 0.78
MYH9-207ENST00000473022 POLA1P09884 1462 aaPredicted RBP19.89■□□□□ 0.77
MYH9-207ENST00000473022 TARBP1Q13395 1621 aaKnown RBP19.88■□□□□ 0.77
MYH9-207ENST00000473022 EIF4G3O43432 1585 aaKnown RBP19.88■□□□□ 0.77
MYH9-207ENST00000473022 AQRO60306 1485 aaKnown RBP eCLIP19.81■□□□□ 0.764e-6■■■■■ 31
MYH9-207ENST00000473022 SOGA1O94964 1423 aa19.81■□□□□ 0.76
MYH9-207ENST00000473022 CUX1P39880 1505 aa19.81■□□□□ 0.76
MYH9-207ENST00000473022 FGD5Q6ZNL6 1462 aa19.8■□□□□ 0.76
MYH9-207ENST00000473022 RAD54L2Q9Y4B4 1467 aa19.8■□□□□ 0.76
MYH9-207ENST00000473022 TRIM41Q8WV44 630 aa19.75■□□□□ 0.75
MYH9-207ENST00000473022 WDR97A6NE52 1622 aa19.74■□□□□ 0.75
MYH9-207ENST00000473022 TDRD9Q8NDG6 1382 aaKnown RBP19.72■□□□□ 0.75
MYH9-207ENST00000473022 CHD1O14646 1710 aa19.71■□□□□ 0.75
MYH9-207ENST00000473022 FBLN2P98095 1184 aa19.66■□□□□ 0.74
MYH9-207ENST00000473022 RIMBP3CA6NJZ7 1639 aa19.63■□□□□ 0.73
MYH9-207ENST00000473022 RIMBP3BA6NNM3 1639 aa19.63■□□□□ 0.73
MYH9-207ENST00000473022 RIMBP3Q9UFD9 1639 aa19.63■□□□□ 0.73
MYH9-207ENST00000473022 SNAPC4Q5SXM2 1469 aa19.63■□□□□ 0.73
MYH9-207ENST00000473022 GRIN2BQ13224 1484 aa19.62■□□□□ 0.73
MYH9-207ENST00000473022 MAGI1Q96QZ7 1491 aaPredicted RBP19.6■□□□□ 0.73
MYH9-207ENST00000473022 ARHGEF11O15085 1522 aa19.59■□□□□ 0.73
MYH9-207ENST00000473022 ABCA10Q8WWZ4 1543 aa19.59■□□□□ 0.73
MYH9-207ENST00000473022 GAPVD1Q14C86 1478 aa19.58■□□□□ 0.72
MYH9-207ENST00000473022 PBRM1Q86U86 1689 aa19.58■□□□□ 0.72
MYH9-207ENST00000473022 WRNQ14191 1432 aaPredicted RBP eCLIP19.58■□□□□ 0.72
MYH9-207ENST00000473022 BIVM-ERCC5R4GMW8 1640 aa19.58■□□□□ 0.72
MYH9-207ENST00000473022 TOP2BQ02880 1626 aa19.57■□□□□ 0.72
MYH9-207ENST00000473022 CHMP7Q8WUX9 453 aaPredicted RBP19.56■□□□□ 0.72
MYH9-207ENST00000473022 ABCA5Q8WWZ7 1642 aa19.54■□□□□ 0.72
MYH9-207ENST00000473022 SYNJ1O43426 1573 aa19.53■□□□□ 0.72
MYH9-207ENST00000473022 SYNJ2O15056 1496 aa19.53■□□□□ 0.72
MYH9-207ENST00000473022 CLASP1Q7Z460 1538 aa19.46■□□□□ 0.71
MYH9-207ENST00000473022 CYB5RLQ6IPT4 315 aa19.43■□□□□ 0.7
MYH9-207ENST00000473022 ARAP1Q96P48 1450 aa19.4■□□□□ 0.7
MYH9-207ENST00000473022 ADAMTS12P58397 1594 aa19.38■□□□□ 0.69
MYH9-207ENST00000473022 ERICH3Q5RHP9 1530 aa19.36■□□□□ 0.69
MYH9-207ENST00000473022 GRIN2AQ12879 1464 aa19.36■□□□□ 0.69
MYH9-207ENST00000473022 FHAD1B1AJZ9 1412 aa19.34■□□□□ 0.69
MYH9-207ENST00000473022 NUP160Q12769 1436 aa19.28■□□□□ 0.68
MYH9-207ENST00000473022 CEP170Q5SW79 1584 aa19.27■□□□□ 0.68
MYH9-207ENST00000473022 KIF27Q86VH2 1401 aa19.2■□□□□ 0.66
MYH9-207ENST00000473022 SHROOM2Q13796 1616 aa19.18■□□□□ 0.66
MYH9-207ENST00000473022 TRHP20396 242 aaPredicted RBP19.16■□□□□ 0.66
MYH9-207ENST00000473022 ERCC6L2Q5T890 1561 aa19.15■□□□□ 0.66
MYH9-207ENST00000473022 CUL7Q14999 1698 aa19.14■□□□□ 0.66
MYH9-207ENST00000473022 IGF1RP08069 1367 aa19.14■□□□□ 0.65
MYH9-207ENST00000473022 RUSC2Q8N2Y8 1516 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms