RNA–Protein interactions for RNA: ENST00000472884.6

FAM53A-205, Transcript of family with sequence similarity 53 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM53A, Length 2,086 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM53A-205ENST00000472884 NISCHQ9Y2I1 1504 aa41.9■■■■■ 4.3
FAM53A-205ENST00000472884 CCDC180Q9P1Z9 1646 aa36.55■■■■□ 3.44
FAM53A-205ENST00000472884 ZCCHC6Q5VYS8 1495 aaKnown RBP35.16■■■■□ 3.22
FAM53A-205ENST00000472884 ABCC9O60706 1549 aa34.81■■■■□ 3.16
FAM53A-205ENST00000472884 DCAF8L2P0C7V8 631 aa34.79■■■■□ 3.16
FAM53A-205ENST00000472884 DCAF1Q9Y4B6 1507 aa34.61■■■■□ 3.13
FAM53A-205ENST00000472884 MYO15BQ96JP2 1530 aa34.27■■■■□ 3.08
FAM53A-205ENST00000472884 SHROOM4Q9ULL8 1493 aa34.15■■■■□ 3.06
FAM53A-205ENST00000472884 NACADO15069 1562 aa34.12■■■■□ 3.05
FAM53A-205ENST00000472884 RB1CC1Q8TDY2 1594 aa33.88■■■■□ 3.01
FAM53A-205ENST00000472884 SCRIBQ14160 1630 aa33.66■■■□□ 2.98
FAM53A-205ENST00000472884 UNC13AQ9UPW8 1703 aa33.12■■■□□ 2.89
FAM53A-205ENST00000472884 PABPN1Q86U42 306 aaKnown RBP eCLIP32.83■■■□□ 2.85
FAM53A-205ENST00000472884 BICRAQ9NZM4 1560 aa32.83■■■□□ 2.85
FAM53A-205ENST00000472884 SUPT5HO00267 1087 aaKnown RBP32.81■■■□□ 2.84
FAM53A-205ENST00000472884 CECR2Q9BXF3 1484 aa32.59■■■□□ 2.81
FAM53A-205ENST00000472884 RSF1Q96T23 1441 aaPredicted RBP32.46■■■□□ 2.79
FAM53A-205ENST00000472884 MROH2BQ7Z745 1585 aa32.37■■■□□ 2.77
FAM53A-205ENST00000472884 BAZ1AQ9NRL2 1556 aaPredicted RBP32.37■■■□□ 2.77
FAM53A-205ENST00000472884 SMARCA4P51532 1647 aa32.22■■■□□ 2.75
FAM53A-205ENST00000472884 WIZO95785 1651 aa32.08■■■□□ 2.73
FAM53A-205ENST00000472884 EIF4G1Q04637 1599 aaKnown RBP31.89■■■□□ 2.7
FAM53A-205ENST00000472884 PEG3Q9GZU2 1588 aa31.82■■■□□ 2.69
FAM53A-205ENST00000472884 ATAD2BQ9ULI0 1458 aa31.77■■■□□ 2.68
FAM53A-205ENST00000472884 TOP2AP11388 1531 aaKnown RBP31.74■■■□□ 2.67
FAM53A-205ENST00000472884 SMARCA2P51531 1590 aa31.74■■■□□ 2.67
FAM53A-205ENST00000472884 BAZ1BQ9UIG0 1483 aaKnown RBP31.59■■■□□ 2.65
FAM53A-205ENST00000472884 NCAPD3P42695 1498 aa31.51■■■□□ 2.64
FAM53A-205ENST00000472884 CC2D2AQ9P2K1 1620 aa31.45■■■□□ 2.63
FAM53A-205ENST00000472884 CCDC88BA6NC98 1476 aa31.44■■■□□ 2.62
FAM53A-205ENST00000472884 HMGXB3Q12766 1538 aa31.44■■■□□ 2.62
FAM53A-205ENST00000472884 CHIC1Q5VXU3 224 aa31.28■■■□□ 2.6
FAM53A-205ENST00000472884 TRIM41Q8WV44 630 aa30.85■■■□□ 2.53
FAM53A-205ENST00000472884 DNAJC5BQ9UF47 199 aa30.85■■■□□ 2.53
FAM53A-205ENST00000472884 CFTRP13569 1480 aa30.78■■■□□ 2.52
FAM53A-205ENST00000472884 ABCC8Q09428 1581 aa30.74■■■□□ 2.51
FAM53A-205ENST00000472884 CADPSQ9ULU8 1353 aa30.73■■■□□ 2.51
FAM53A-205ENST00000472884 WRNQ14191 1432 aaPredicted RBP eCLIP30.58■■■□□ 2.49
FAM53A-205ENST00000472884 PRDM2Q13029 1718 aa30.52■■■□□ 2.48
FAM53A-205ENST00000472884 NESP48681 1621 aa30.49■■■□□ 2.47
FAM53A-205ENST00000472884 LAMC3Q9Y6N6 1575 aa30.46■■■□□ 2.47
FAM53A-205ENST00000472884 SYNJ1O43426 1573 aa30.42■■■□□ 2.46
FAM53A-205ENST00000472884 FANCD2Q9BXW9 1451 aa30.38■■■□□ 2.45
FAM53A-205ENST00000472884 TOP2BQ02880 1626 aa30.3■■■□□ 2.44
FAM53A-205ENST00000472884 FAM9AQ8IZU1 332 aaPredicted RBP30.3■■■□□ 2.44
FAM53A-205ENST00000472884 PDS5BQ9NTI5 1447 aa30.28■■■□□ 2.44
FAM53A-205ENST00000472884 CUX1P39880 1505 aa30.27■■■□□ 2.44
FAM53A-205ENST00000472884 BIVM-ERCC5R4GMW8 1640 aa30.25■■■□□ 2.43
FAM53A-205ENST00000472884 CEP164Q9UPV0 1460 aa30.2■■■□□ 2.43
FAM53A-205ENST00000472884 SOGA1O94964 1423 aa30.15■■■□□ 2.42
FAM53A-205ENST00000472884 LOC105371045A0A1W2PR82 267 aa30.1■■■□□ 2.41
FAM53A-205ENST00000472884 KIF21AQ7Z4S6 1674 aa30.07■■■□□ 2.4
FAM53A-205ENST00000472884 EEA1Q15075 1411 aa30.04■■■□□ 2.4
FAM53A-205ENST00000472884 DNMBPQ6XZF7 1577 aa30.04■■■□□ 2.4
FAM53A-205ENST00000472884 RUSC2Q8N2Y8 1516 aa30.03■■■□□ 2.4
FAM53A-205ENST00000472884 TOPBP1Q92547 1522 aa30.02■■■□□ 2.4
FAM53A-205ENST00000472884 FGD5Q6ZNL6 1462 aa29.99■■■□□ 2.39
FAM53A-205ENST00000472884 URB2Q14146 1524 aaKnown RBP29.99■■■□□ 2.39
FAM53A-205ENST00000472884 CSRNP3Q8WYN3 585 aa29.94■■■□□ 2.38
FAM53A-205ENST00000472884 EHMT2Q96KQ7 1210 aa29.9■■■□□ 2.38
FAM53A-205ENST00000472884 ERCC6Q03468 1493 aa29.88■■■□□ 2.37
FAM53A-205ENST00000472884 POLA1P09884 1462 aaPredicted RBP29.87■■■□□ 2.37
FAM53A-205ENST00000472884 MRC2Q9UBG0 1479 aa29.86■■■□□ 2.37
FAM53A-205ENST00000472884 KIF27Q86VH2 1401 aa29.83■■■□□ 2.37
FAM53A-205ENST00000472884 CUX2O14529 1486 aa29.79■■■□□ 2.36
FAM53A-205ENST00000472884 RAD54L2Q9Y4B4 1467 aa29.78■■■□□ 2.36
FAM53A-205ENST00000472884 ABCA10Q8WWZ4 1543 aa29.7■■■□□ 2.35
FAM53A-205ENST00000472884 WDR62O43379 1518 aa29.69■■■□□ 2.34
FAM53A-205ENST00000472884 GOLGA3Q08378 1498 aa29.63■■■□□ 2.33
FAM53A-205ENST00000472884 THOC2Q8NI27 1593 aaKnown RBP29.62■■■□□ 2.33
FAM53A-205ENST00000472884 KIF21BO75037 1637 aa29.62■■■□□ 2.33
FAM53A-205ENST00000472884 UBTFP17480 764 aaKnown RBP29.58■■■□□ 2.33
FAM53A-205ENST00000472884 IGF1RP08069 1367 aa29.58■■■□□ 2.33
FAM53A-205ENST00000472884 WDR97A6NE52 1622 aa29.56■■■□□ 2.32
FAM53A-205ENST00000472884 PRXQ9BXM0 1461 aa29.56■■■□□ 2.32
FAM53A-205ENST00000472884 TARBP1Q13395 1621 aaKnown RBP29.54■■■□□ 2.32
FAM53A-205ENST00000472884 TDRD9Q8NDG6 1382 aaKnown RBP29.54■■■□□ 2.32
FAM53A-205ENST00000472884 RAPGEF2Q9Y4G8 1499 aa29.54■■■□□ 2.32
FAM53A-205ENST00000472884 TNIKQ9UKE5 1360 aa29.51■■■□□ 2.31
FAM53A-205ENST00000472884 IFT140Q96RY7 1462 aa29.48■■■□□ 2.31
FAM53A-205ENST00000472884 ERICH3Q5RHP9 1530 aa29.47■■■□□ 2.31
FAM53A-205ENST00000472884 GAPVD1Q14C86 1478 aa29.45■■■□□ 2.3
FAM53A-205ENST00000472884 ABCA5Q8WWZ7 1642 aa29.44■■■□□ 2.3
FAM53A-205ENST00000472884 CARMIL1Q5VZK9 1371 aa29.43■■■□□ 2.3
FAM53A-205ENST00000472884 AQRO60306 1485 aaKnown RBP eCLIP29.36■■■□□ 2.29
FAM53A-205ENST00000472884 CEP162Q5TB80 1403 aa29.35■■■□□ 2.29
FAM53A-205ENST00000472884 ZNF608Q9ULD9 1512 aaPredicted RBP29.33■■■□□ 2.29
FAM53A-205ENST00000472884 CUL7Q14999 1698 aa29.31■■■□□ 2.28
FAM53A-205ENST00000472884 GRIN2BQ13224 1484 aa29.24■■■□□ 2.27
FAM53A-205ENST00000472884 PBRM1Q86U86 1689 aa29.22■■■□□ 2.27
FAM53A-205ENST00000472884 EIF4G3O43432 1585 aaKnown RBP29.2■■■□□ 2.27
FAM53A-205ENST00000472884 RANGAP1P46060 587 aaPredicted RBP29.17■■■□□ 2.26
FAM53A-205ENST00000472884 CLIP1P30622 1438 aa29.17■■■□□ 2.26
FAM53A-205ENST00000472884 FHAD1B1AJZ9 1412 aa29.13■■■□□ 2.25
FAM53A-205ENST00000472884 ADAMTS12P58397 1594 aa29.08■■■□□ 2.25
FAM53A-205ENST00000472884 SNAPC4Q5SXM2 1469 aa29.06■■■□□ 2.24
FAM53A-205ENST00000472884 MAGI1Q96QZ7 1491 aaPredicted RBP29■■■□□ 2.23
FAM53A-205ENST00000472884 CTTNBP2Q8WZ74 1663 aa28.94■■■□□ 2.22
FAM53A-205ENST00000472884 CHMP7Q8WUX9 453 aaPredicted RBP28.9■■■□□ 2.22
FAM53A-205ENST00000472884 SYNJ2O15056 1496 aa28.9■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms