RNA–Protein interactions for RNA: ENST00000472884.6

FAM53A-205, Transcript of family with sequence similarity 53 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM53A, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM53A-205ENST00000472884 NISCHQ9Y2I1 1504 aa41.9■■■■■ 4.3
FAM53A-205ENST00000472884 CCDC180Q9P1Z9 1646 aa36.55■■■■□ 3.44
FAM53A-205ENST00000472884 ZCCHC6Q5VYS8 1495 aaKnown RBP35.16■■■■□ 3.22
FAM53A-205ENST00000472884 ABCC9O60706 1549 aa34.81■■■■□ 3.16
FAM53A-205ENST00000472884 DCAF8L2P0C7V8 631 aa34.79■■■■□ 3.16
FAM53A-205ENST00000472884 DCAF1Q9Y4B6 1507 aa34.61■■■■□ 3.13
FAM53A-205ENST00000472884 MYO15BQ96JP2 1530 aa34.27■■■■□ 3.08
FAM53A-205ENST00000472884 SHROOM4Q9ULL8 1493 aa34.15■■■■□ 3.06
FAM53A-205ENST00000472884 NACADO15069 1562 aa34.12■■■■□ 3.05
FAM53A-205ENST00000472884 RB1CC1Q8TDY2 1594 aa33.88■■■■□ 3.01
FAM53A-205ENST00000472884 SCRIBQ14160 1630 aa33.66■■■□□ 2.98
FAM53A-205ENST00000472884 UNC13AQ9UPW8 1703 aa33.12■■■□□ 2.89
FAM53A-205ENST00000472884 PABPN1Q86U42 306 aaKnown RBP eCLIP32.83■■■□□ 2.85
FAM53A-205ENST00000472884 BICRAQ9NZM4 1560 aa32.83■■■□□ 2.85
FAM53A-205ENST00000472884 SUPT5HO00267 1087 aaKnown RBP32.81■■■□□ 2.84
FAM53A-205ENST00000472884 CECR2Q9BXF3 1484 aa32.59■■■□□ 2.81
FAM53A-205ENST00000472884 RSF1Q96T23 1441 aaPredicted RBP32.46■■■□□ 2.79
FAM53A-205ENST00000472884 MROH2BQ7Z745 1585 aa32.37■■■□□ 2.77
FAM53A-205ENST00000472884 BAZ1AQ9NRL2 1556 aaPredicted RBP32.37■■■□□ 2.77
FAM53A-205ENST00000472884 SMARCA4P51532 1647 aa32.22■■■□□ 2.75
FAM53A-205ENST00000472884 WIZO95785 1651 aa32.08■■■□□ 2.73
FAM53A-205ENST00000472884 EIF4G1Q04637 1599 aaKnown RBP31.89■■■□□ 2.7
FAM53A-205ENST00000472884 PEG3Q9GZU2 1588 aa31.82■■■□□ 2.69
FAM53A-205ENST00000472884 ATAD2BQ9ULI0 1458 aa31.77■■■□□ 2.68
FAM53A-205ENST00000472884 TOP2AP11388 1531 aaKnown RBP31.74■■■□□ 2.67
FAM53A-205ENST00000472884 SMARCA2P51531 1590 aa31.74■■■□□ 2.67
FAM53A-205ENST00000472884 BAZ1BQ9UIG0 1483 aaKnown RBP31.59■■■□□ 2.65
FAM53A-205ENST00000472884 NCAPD3P42695 1498 aa31.51■■■□□ 2.64
FAM53A-205ENST00000472884 CC2D2AQ9P2K1 1620 aa31.45■■■□□ 2.63
FAM53A-205ENST00000472884 CCDC88BA6NC98 1476 aa31.44■■■□□ 2.62
FAM53A-205ENST00000472884 HMGXB3Q12766 1538 aa31.44■■■□□ 2.62
FAM53A-205ENST00000472884 CHIC1Q5VXU3 224 aa31.28■■■□□ 2.6
FAM53A-205ENST00000472884 TRIM41Q8WV44 630 aa30.85■■■□□ 2.53
FAM53A-205ENST00000472884 DNAJC5BQ9UF47 199 aa30.85■■■□□ 2.53
FAM53A-205ENST00000472884 CFTRP13569 1480 aa30.78■■■□□ 2.52
FAM53A-205ENST00000472884 ABCC8Q09428 1581 aa30.74■■■□□ 2.51
FAM53A-205ENST00000472884 CADPSQ9ULU8 1353 aa30.73■■■□□ 2.51
FAM53A-205ENST00000472884 WRNQ14191 1432 aaPredicted RBP eCLIP30.58■■■□□ 2.49
FAM53A-205ENST00000472884 PRDM2Q13029 1718 aa30.52■■■□□ 2.48
FAM53A-205ENST00000472884 NESP48681 1621 aa30.49■■■□□ 2.47
FAM53A-205ENST00000472884 LAMC3Q9Y6N6 1575 aa30.46■■■□□ 2.47
FAM53A-205ENST00000472884 SYNJ1O43426 1573 aa30.42■■■□□ 2.46
FAM53A-205ENST00000472884 FANCD2Q9BXW9 1451 aa30.38■■■□□ 2.45
FAM53A-205ENST00000472884 TOP2BQ02880 1626 aa30.3■■■□□ 2.44
FAM53A-205ENST00000472884 FAM9AQ8IZU1 332 aaPredicted RBP30.3■■■□□ 2.44
FAM53A-205ENST00000472884 PDS5BQ9NTI5 1447 aa30.28■■■□□ 2.44
FAM53A-205ENST00000472884 CUX1P39880 1505 aa30.27■■■□□ 2.44
FAM53A-205ENST00000472884 BIVM-ERCC5R4GMW8 1640 aa30.25■■■□□ 2.43
FAM53A-205ENST00000472884 CEP164Q9UPV0 1460 aa30.2■■■□□ 2.43
FAM53A-205ENST00000472884 SOGA1O94964 1423 aa30.15■■■□□ 2.42
FAM53A-205ENST00000472884 LOC105371045A0A1W2PR82 267 aa30.1■■■□□ 2.41
FAM53A-205ENST00000472884 KIF21AQ7Z4S6 1674 aa30.07■■■□□ 2.4
FAM53A-205ENST00000472884 EEA1Q15075 1411 aa30.04■■■□□ 2.4
FAM53A-205ENST00000472884 DNMBPQ6XZF7 1577 aa30.04■■■□□ 2.4
FAM53A-205ENST00000472884 RUSC2Q8N2Y8 1516 aa30.03■■■□□ 2.4
FAM53A-205ENST00000472884 TOPBP1Q92547 1522 aa30.02■■■□□ 2.4
FAM53A-205ENST00000472884 FGD5Q6ZNL6 1462 aa29.99■■■□□ 2.39
FAM53A-205ENST00000472884 URB2Q14146 1524 aaKnown RBP29.99■■■□□ 2.39
FAM53A-205ENST00000472884 CSRNP3Q8WYN3 585 aa29.94■■■□□ 2.38
FAM53A-205ENST00000472884 EHMT2Q96KQ7 1210 aa29.9■■■□□ 2.38
FAM53A-205ENST00000472884 ERCC6Q03468 1493 aa29.88■■■□□ 2.37
FAM53A-205ENST00000472884 POLA1P09884 1462 aaPredicted RBP29.87■■■□□ 2.37
FAM53A-205ENST00000472884 MRC2Q9UBG0 1479 aa29.86■■■□□ 2.37
FAM53A-205ENST00000472884 KIF27Q86VH2 1401 aa29.83■■■□□ 2.37
FAM53A-205ENST00000472884 CUX2O14529 1486 aa29.79■■■□□ 2.36
FAM53A-205ENST00000472884 RAD54L2Q9Y4B4 1467 aa29.78■■■□□ 2.36
FAM53A-205ENST00000472884 ABCA10Q8WWZ4 1543 aa29.7■■■□□ 2.35
FAM53A-205ENST00000472884 WDR62O43379 1518 aa29.69■■■□□ 2.34
FAM53A-205ENST00000472884 GOLGA3Q08378 1498 aa29.63■■■□□ 2.33
FAM53A-205ENST00000472884 THOC2Q8NI27 1593 aaKnown RBP29.62■■■□□ 2.33
FAM53A-205ENST00000472884 KIF21BO75037 1637 aa29.62■■■□□ 2.33
FAM53A-205ENST00000472884 UBTFP17480 764 aaKnown RBP29.58■■■□□ 2.33
FAM53A-205ENST00000472884 IGF1RP08069 1367 aa29.58■■■□□ 2.33
FAM53A-205ENST00000472884 WDR97A6NE52 1622 aa29.56■■■□□ 2.32
FAM53A-205ENST00000472884 PRXQ9BXM0 1461 aa29.56■■■□□ 2.32
FAM53A-205ENST00000472884 TARBP1Q13395 1621 aaKnown RBP29.54■■■□□ 2.32
FAM53A-205ENST00000472884 TDRD9Q8NDG6 1382 aaKnown RBP29.54■■■□□ 2.32
FAM53A-205ENST00000472884 RAPGEF2Q9Y4G8 1499 aa29.54■■■□□ 2.32
FAM53A-205ENST00000472884 TNIKQ9UKE5 1360 aa29.51■■■□□ 2.31
FAM53A-205ENST00000472884 IFT140Q96RY7 1462 aa29.48■■■□□ 2.31
FAM53A-205ENST00000472884 ERICH3Q5RHP9 1530 aa29.47■■■□□ 2.31
FAM53A-205ENST00000472884 GAPVD1Q14C86 1478 aa29.45■■■□□ 2.3
FAM53A-205ENST00000472884 ABCA5Q8WWZ7 1642 aa29.44■■■□□ 2.3
FAM53A-205ENST00000472884 CARMIL1Q5VZK9 1371 aa29.43■■■□□ 2.3
FAM53A-205ENST00000472884 AQRO60306 1485 aaKnown RBP eCLIP29.36■■■□□ 2.29
FAM53A-205ENST00000472884 CEP162Q5TB80 1403 aa29.35■■■□□ 2.29
FAM53A-205ENST00000472884 ZNF608Q9ULD9 1512 aaPredicted RBP29.33■■■□□ 2.29
FAM53A-205ENST00000472884 CUL7Q14999 1698 aa29.31■■■□□ 2.28
FAM53A-205ENST00000472884 GRIN2BQ13224 1484 aa29.24■■■□□ 2.27
FAM53A-205ENST00000472884 PBRM1Q86U86 1689 aa29.22■■■□□ 2.27
FAM53A-205ENST00000472884 EIF4G3O43432 1585 aaKnown RBP29.2■■■□□ 2.27
FAM53A-205ENST00000472884 RANGAP1P46060 587 aaPredicted RBP29.17■■■□□ 2.26
FAM53A-205ENST00000472884 CLIP1P30622 1438 aa29.17■■■□□ 2.26
FAM53A-205ENST00000472884 FHAD1B1AJZ9 1412 aa29.13■■■□□ 2.25
FAM53A-205ENST00000472884 ADAMTS12P58397 1594 aa29.08■■■□□ 2.25
FAM53A-205ENST00000472884 SNAPC4Q5SXM2 1469 aa29.06■■■□□ 2.24
FAM53A-205ENST00000472884 MAGI1Q96QZ7 1491 aaPredicted RBP29■■■□□ 2.23
FAM53A-205ENST00000472884 CTTNBP2Q8WZ74 1663 aa28.94■■■□□ 2.22
FAM53A-205ENST00000472884 CHMP7Q8WUX9 453 aaPredicted RBP28.9■■■□□ 2.22
FAM53A-205ENST00000472884 SYNJ2O15056 1496 aa28.9■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms