RNA–Protein interactions for RNA: ENST00000472827.1

LMBRD1-203, Transcript of LMBR1 domain containing 1, humanhuman

TSL 5

Gene LMBRD1, Length 1,861 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBRD1-203ENST00000472827 NISCHQ9Y2I1 1504 aa24.3■■□□□ 1.48
LMBRD1-203ENST00000472827 ABCC9O60706 1549 aa22.23■■□□□ 1.15
LMBRD1-203ENST00000472827 CCDC180Q9P1Z9 1646 aa21.91■■□□□ 1.1
LMBRD1-203ENST00000472827 AEBP2Q6ZN18 517 aaPredicted RBP21.22■□□□□ 0.99
LMBRD1-203ENST00000472827 DNAJC5BQ9UF47 199 aa21.09■□□□□ 0.97
LMBRD1-203ENST00000472827 RB1CC1Q8TDY2 1594 aa21.01■□□□□ 0.95
LMBRD1-203ENST00000472827 NACADO15069 1562 aa20.79■□□□□ 0.92
LMBRD1-203ENST00000472827 DCAF8L2P0C7V8 631 aa20.74■□□□□ 0.91
LMBRD1-203ENST00000472827 PABPN1Q86U42 306 aaKnown RBP eCLIP20.67■□□□□ 0.9
LMBRD1-203ENST00000472827 UNC13AQ9UPW8 1703 aa20.56■□□□□ 0.88
LMBRD1-203ENST00000472827 BICRAQ9NZM4 1560 aa20.4■□□□□ 0.86
LMBRD1-203ENST00000472827 MYO15BQ96JP2 1530 aa20.36■□□□□ 0.85
LMBRD1-203ENST00000472827 ZCCHC6Q5VYS8 1495 aaKnown RBP20.07■□□□□ 0.8
LMBRD1-203ENST00000472827 CHIC1Q5VXU3 224 aa20.07■□□□□ 0.8
LMBRD1-203ENST00000472827 CC2D2AQ9P2K1 1620 aa20.05■□□□□ 0.8
LMBRD1-203ENST00000472827 SHROOM4Q9ULL8 1493 aa20.05■□□□□ 0.8
LMBRD1-203ENST00000472827 CECR2Q9BXF3 1484 aa20.03■□□□□ 0.8
LMBRD1-203ENST00000472827 DCAF1Q9Y4B6 1507 aa20.03■□□□□ 0.8
LMBRD1-203ENST00000472827 SCRIBQ14160 1630 aa20■□□□□ 0.79
LMBRD1-203ENST00000472827 EIF4G1Q04637 1599 aaKnown RBP19.92■□□□□ 0.78
LMBRD1-203ENST00000472827 DNAJC5Q9H3Z4 198 aa19.55■□□□□ 0.72
LMBRD1-203ENST00000472827 CUX2O14529 1486 aa19.23■□□□□ 0.67
LMBRD1-203ENST00000472827 ERCC6Q03468 1493 aa19.22■□□□□ 0.67
LMBRD1-203ENST00000472827 NCAPD3P42695 1498 aa19.19■□□□□ 0.66
LMBRD1-203ENST00000472827 ATAD2BQ9ULI0 1458 aa19.1■□□□□ 0.65
LMBRD1-203ENST00000472827 SMARCA2P51531 1590 aa19.04■□□□□ 0.64
LMBRD1-203ENST00000472827 SMARCA4P51532 1647 aa19.02■□□□□ 0.64
LMBRD1-203ENST00000472827 HMGXB3Q12766 1538 aa19.01■□□□□ 0.63
LMBRD1-203ENST00000472827 NESP48681 1621 aa19.01■□□□□ 0.63
LMBRD1-203ENST00000472827 BAZ1BQ9UIG0 1483 aaKnown RBP18.92■□□□□ 0.62
LMBRD1-203ENST00000472827 BAZ1AQ9NRL2 1556 aaPredicted RBP18.88■□□□□ 0.61
LMBRD1-203ENST00000472827 THOC2Q8NI27 1593 aaKnown RBP18.84■□□□□ 0.61
LMBRD1-203ENST00000472827 LAMC3Q9Y6N6 1575 aa18.81■□□□□ 0.6
LMBRD1-203ENST00000472827 PEG3Q9GZU2 1588 aa18.8■□□□□ 0.6
LMBRD1-203ENST00000472827 KIF21AQ7Z4S6 1674 aa18.76■□□□□ 0.59
LMBRD1-203ENST00000472827 MROH2BQ7Z745 1585 aa18.74■□□□□ 0.59
LMBRD1-203ENST00000472827 PDS5BQ9NTI5 1447 aa18.72■□□□□ 0.59
LMBRD1-203ENST00000472827 TRIM41Q8WV44 630 aa18.65■□□□□ 0.58
LMBRD1-203ENST00000472827 CADPSQ9ULU8 1353 aa18.61■□□□□ 0.57
LMBRD1-203ENST00000472827 MRC2Q9UBG0 1479 aa18.57■□□□□ 0.56
LMBRD1-203ENST00000472827 WIZO95785 1651 aa18.52■□□□□ 0.56
LMBRD1-203ENST00000472827 WDR62O43379 1518 aa18.52■□□□□ 0.55
LMBRD1-203ENST00000472827 CEP164Q9UPV0 1460 aa18.46■□□□□ 0.55
LMBRD1-203ENST00000472827 SENP3Q9H4L4 574 aaPredicted RBP18.41■□□□□ 0.54
LMBRD1-203ENST00000472827 FANCD2Q9BXW9 1451 aa18.41■□□□□ 0.54
LMBRD1-203ENST00000472827 OSCARQ8IYS5 282 aa18.35■□□□□ 0.53
LMBRD1-203ENST00000472827 CFTRP13569 1480 aa18.33■□□□□ 0.52
LMBRD1-203ENST00000472827 URB2Q14146 1524 aaKnown RBP18.27■□□□□ 0.51
LMBRD1-203ENST00000472827 RSF1Q96T23 1441 aaPredicted RBP18.24■□□□□ 0.51
LMBRD1-203ENST00000472827 TOP2AP11388 1531 aaKnown RBP18.23■□□□□ 0.51
LMBRD1-203ENST00000472827 PRDM2Q13029 1718 aa18.14■□□□□ 0.5
LMBRD1-203ENST00000472827 RIMBP3CA6NJZ7 1639 aa18.13■□□□□ 0.49
LMBRD1-203ENST00000472827 RIMBP3BA6NNM3 1639 aa18.13■□□□□ 0.49
LMBRD1-203ENST00000472827 RIMBP3Q9UFD9 1639 aa18.13■□□□□ 0.49
LMBRD1-203ENST00000472827 ZNF608Q9ULD9 1512 aaPredicted RBP18.1■□□□□ 0.49
LMBRD1-203ENST00000472827 IFT140Q96RY7 1462 aa18.08■□□□□ 0.48
LMBRD1-203ENST00000472827 CCDC88BA6NC98 1476 aa18.05■□□□□ 0.48
LMBRD1-203ENST00000472827 ARHGEF11O15085 1522 aa18.03■□□□□ 0.48
LMBRD1-203ENST00000472827 TOPBP1Q92547 1522 aa18.02■□□□□ 0.48
LMBRD1-203ENST00000472827 PHF23Q9BUL5 403 aaPredicted RBP17.98■□□□□ 0.47
LMBRD1-203ENST00000472827 EIF4G3O43432 1585 aaKnown RBP17.98■□□□□ 0.47
LMBRD1-203ENST00000472827 CYB5RLQ6IPT4 315 aa17.97■□□□□ 0.47
LMBRD1-203ENST00000472827 ABCC8Q09428 1581 aa17.96■□□□□ 0.47
LMBRD1-203ENST00000472827 DNMBPQ6XZF7 1577 aa17.93■□□□□ 0.46
LMBRD1-203ENST00000472827 CHD1O14646 1710 aa17.92■□□□□ 0.46
LMBRD1-203ENST00000472827 AQRO60306 1485 aaKnown RBP eCLIP17.91■□□□□ 0.46
LMBRD1-203ENST00000472827 FBLN2P98095 1184 aa17.9■□□□□ 0.46
LMBRD1-203ENST00000472827 TARBP1Q13395 1621 aaKnown RBP17.88■□□□□ 0.45
LMBRD1-203ENST00000472827 TRHP20396 242 aaPredicted RBP17.88■□□□□ 0.45
LMBRD1-203ENST00000472827 ARAP1Q96P48 1450 aa17.83■□□□□ 0.45
LMBRD1-203ENST00000472827 POLA1P09884 1462 aaPredicted RBP17.82■□□□□ 0.44
LMBRD1-203ENST00000472827 RAD54L2Q9Y4B4 1467 aa17.78■□□□□ 0.44
LMBRD1-203ENST00000472827 TDRD9Q8NDG6 1382 aaKnown RBP17.77■□□□□ 0.44
LMBRD1-203ENST00000472827 SOGA1O94964 1423 aa17.76■□□□□ 0.43
LMBRD1-203ENST00000472827 SNAPC4Q5SXM2 1469 aa17.71■□□□□ 0.43
LMBRD1-203ENST00000472827 CHMP7Q8WUX9 453 aaPredicted RBP17.7■□□□□ 0.42
LMBRD1-203ENST00000472827 FGD5Q6ZNL6 1462 aa17.68■□□□□ 0.42
LMBRD1-203ENST00000472827 CLASP1Q7Z460 1538 aa17.66■□□□□ 0.42
LMBRD1-203ENST00000472827 SYNJ1O43426 1573 aa17.65■□□□□ 0.42
LMBRD1-203ENST00000472827 WDR97A6NE52 1622 aa17.65■□□□□ 0.42
LMBRD1-203ENST00000472827 MAGI1Q96QZ7 1491 aaPredicted RBP17.63■□□□□ 0.41
LMBRD1-203ENST00000472827 CUX1P39880 1505 aa17.62■□□□□ 0.41
LMBRD1-203ENST00000472827 GRIN2BQ13224 1484 aa17.62■□□□□ 0.41
LMBRD1-203ENST00000472827 SYNJ2O15056 1496 aa17.59■□□□□ 0.41
LMBRD1-203ENST00000472827 PBRM1Q86U86 1689 aa17.54■□□□□ 0.4
LMBRD1-203ENST00000472827 GAPVD1Q14C86 1478 aa17.53■□□□□ 0.4
LMBRD1-203ENST00000472827 SUPT5HO00267 1087 aaKnown RBP17.51■□□□□ 0.39
LMBRD1-203ENST00000472827 ABCA5Q8WWZ7 1642 aa17.45■□□□□ 0.38
LMBRD1-203ENST00000472827 ABCA10Q8WWZ4 1543 aa17.44■□□□□ 0.38
LMBRD1-203ENST00000472827 ERCC6L2Q5T890 1561 aa17.4■□□□□ 0.38
LMBRD1-203ENST00000472827 GRIN2AQ12879 1464 aa17.39■□□□□ 0.37
LMBRD1-203ENST00000472827 WRNQ14191 1432 aaPredicted RBP eCLIP17.34■□□□□ 0.37
LMBRD1-203ENST00000472827 CEP170Q5SW79 1584 aa17.34■□□□□ 0.37
LMBRD1-203ENST00000472827 ADAMTS12P58397 1594 aa17.33■□□□□ 0.37
LMBRD1-203ENST00000472827 NUP160Q12769 1436 aa17.32■□□□□ 0.36
LMBRD1-203ENST00000472827 FHAD1B1AJZ9 1412 aa17.29■□□□□ 0.36
LMBRD1-203ENST00000472827 SHROOM2Q13796 1616 aa17.28■□□□□ 0.36
LMBRD1-203ENST00000472827 TOP2BQ02880 1626 aa17.25■□□□□ 0.35
LMBRD1-203ENST00000472827 BIVM-ERCC5R4GMW8 1640 aa17.25■□□□□ 0.35
LMBRD1-203ENST00000472827 KIF13AQ9H1H9 1805 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 124.4 ms