RNA–Protein interactions for RNA: ENST00000472776.1

CLASP1-210, Transcript of cytoplasmic linker associated protein 1, humanhuman

TSL 2

Gene CLASP1, Length 1,982 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLASP1-210ENST00000472776 NISCHQ9Y2I1 1504 aa36.28■■■■□ 3.4
CLASP1-210ENST00000472776 CCDC180Q9P1Z9 1646 aa31.82■■■□□ 2.68
CLASP1-210ENST00000472776 ABCC9O60706 1549 aa30.49■■■□□ 2.47
CLASP1-210ENST00000472776 ZCCHC6Q5VYS8 1495 aaKnown RBP30.4■■■□□ 2.46
CLASP1-210ENST00000472776 DCAF8L2P0C7V8 631 aa30.05■■■□□ 2.4
CLASP1-210ENST00000472776 DCAF1Q9Y4B6 1507 aa29.96■■■□□ 2.39
CLASP1-210ENST00000472776 MYO15BQ96JP2 1530 aa29.76■■■□□ 2.35
CLASP1-210ENST00000472776 NACADO15069 1562 aa29.72■■■□□ 2.35
CLASP1-210ENST00000472776 RB1CC1Q8TDY2 1594 aa29.56■■■□□ 2.32
CLASP1-210ENST00000472776 SHROOM4Q9ULL8 1493 aa29.31■■■□□ 2.28
CLASP1-210ENST00000472776 SCRIBQ14160 1630 aa29.24■■■□□ 2.27
CLASP1-210ENST00000472776 UNC13AQ9UPW8 1703 aa29.05■■■□□ 2.24
CLASP1-210ENST00000472776 BICRAQ9NZM4 1560 aa28.75■■■□□ 2.19
CLASP1-210ENST00000472776 PABPN1Q86U42 306 aaKnown RBP eCLIP28.66■■■□□ 2.18
CLASP1-210ENST00000472776 CECR2Q9BXF3 1484 aa28.26■■■□□ 2.11
CLASP1-210ENST00000472776 MROH2BQ7Z745 1585 aa28.04■■■□□ 2.08
CLASP1-210ENST00000472776 BAZ1AQ9NRL2 1556 aaPredicted RBP28.02■■■□□ 2.08
CLASP1-210ENST00000472776 SMARCA4P51532 1647 aa27.99■■■□□ 2.07
CLASP1-210ENST00000472776 RSF1Q96T23 1441 aaPredicted RBP27.98■■■□□ 2.07
CLASP1-210ENST00000472776 SUPT5HO00267 1087 aaKnown RBP27.95■■■□□ 2.06
CLASP1-210ENST00000472776 EIF4G1Q04637 1599 aaKnown RBP27.89■■■□□ 2.06
CLASP1-210ENST00000472776 WIZO95785 1651 aa27.79■■■□□ 2.04
CLASP1-210ENST00000472776 PEG3Q9GZU2 1588 aa27.66■■■□□ 2.02
CLASP1-210ENST00000472776 ATAD2BQ9ULI0 1458 aa27.62■■■□□ 2.01
CLASP1-210ENST00000472776 CC2D2AQ9P2K1 1620 aa27.59■■■□□ 2.01
CLASP1-210ENST00000472776 SMARCA2P51531 1590 aa27.56■■■□□ 2
CLASP1-210ENST00000472776 TOP2AP11388 1531 aaKnown RBP27.46■■□□□ 1.99
CLASP1-210ENST00000472776 NCAPD3P42695 1498 aa27.44■■□□□ 1.98
CLASP1-210ENST00000472776 BAZ1BQ9UIG0 1483 aaKnown RBP27.42■■□□□ 1.98
CLASP1-210ENST00000472776 HMGXB3Q12766 1538 aa27.37■■□□□ 1.97
CLASP1-210ENST00000472776 DNAJC5BQ9UF47 199 aa27.32■■□□□ 1.96
CLASP1-210ENST00000472776 CCDC88BA6NC98 1476 aa27.18■■□□□ 1.94
CLASP1-210ENST00000472776 CFTRP13569 1480 aa26.72■■□□□ 1.87
CLASP1-210ENST00000472776 CADPSQ9ULU8 1353 aa26.69■■□□□ 1.86
CLASP1-210ENST00000472776 NESP48681 1621 aa26.67■■□□□ 1.86
CLASP1-210ENST00000472776 PRDM2Q13029 1718 aa26.58■■□□□ 1.85
CLASP1-210ENST00000472776 LAMC3Q9Y6N6 1575 aa26.57■■□□□ 1.84
CLASP1-210ENST00000472776 CHIC1Q5VXU3 224 aa26.53■■□□□ 1.84
CLASP1-210ENST00000472776 ABCC8Q09428 1581 aa26.51■■□□□ 1.83
CLASP1-210ENST00000472776 FANCD2Q9BXW9 1451 aa26.42■■□□□ 1.82
CLASP1-210ENST00000472776 KIF21AQ7Z4S6 1674 aa26.35■■□□□ 1.81
CLASP1-210ENST00000472776 PDS5BQ9NTI5 1447 aa26.35■■□□□ 1.81
CLASP1-210ENST00000472776 WRNQ14191 1432 aaPredicted RBP eCLIP26.33■■□□□ 1.81
CLASP1-210ENST00000472776 SYNJ1O43426 1573 aa26.29■■□□□ 1.8
CLASP1-210ENST00000472776 CEP164Q9UPV0 1460 aa26.28■■□□□ 1.8
CLASP1-210ENST00000472776 TRIM41Q8WV44 630 aa26.27■■□□□ 1.8
CLASP1-210ENST00000472776 CUX1P39880 1505 aa26.24■■□□□ 1.79
CLASP1-210ENST00000472776 TOP2BQ02880 1626 aa26.18■■□□□ 1.78
CLASP1-210ENST00000472776 BIVM-ERCC5R4GMW8 1640 aa26.17■■□□□ 1.78
CLASP1-210ENST00000472776 URB2Q14146 1524 aaKnown RBP26.14■■□□□ 1.78
CLASP1-210ENST00000472776 ERCC6Q03468 1493 aa26.14■■□□□ 1.78
CLASP1-210ENST00000472776 DNMBPQ6XZF7 1577 aa26.1■■□□□ 1.77
CLASP1-210ENST00000472776 TOPBP1Q92547 1522 aa26.1■■□□□ 1.77
CLASP1-210ENST00000472776 MRC2Q9UBG0 1479 aa26.07■■□□□ 1.76
CLASP1-210ENST00000472776 THOC2Q8NI27 1593 aaKnown RBP26.02■■□□□ 1.76
CLASP1-210ENST00000472776 FGD5Q6ZNL6 1462 aa26■■□□□ 1.75
CLASP1-210ENST00000472776 WDR62O43379 1518 aa25.97■■□□□ 1.75
CLASP1-210ENST00000472776 POLA1P09884 1462 aaPredicted RBP25.95■■□□□ 1.74
CLASP1-210ENST00000472776 SOGA1O94964 1423 aa25.9■■□□□ 1.74
CLASP1-210ENST00000472776 RAD54L2Q9Y4B4 1467 aa25.87■■□□□ 1.73
CLASP1-210ENST00000472776 RUSC2Q8N2Y8 1516 aa25.85■■□□□ 1.73
CLASP1-210ENST00000472776 FAM9AQ8IZU1 332 aaPredicted RBP25.82■■□□□ 1.72
CLASP1-210ENST00000472776 CUX2O14529 1486 aa25.81■■□□□ 1.72
CLASP1-210ENST00000472776 TARBP1Q13395 1621 aaKnown RBP25.76■■□□□ 1.71
CLASP1-210ENST00000472776 WDR97A6NE52 1622 aa25.75■■□□□ 1.71
CLASP1-210ENST00000472776 ABCA10Q8WWZ4 1543 aa25.75■■□□□ 1.71
CLASP1-210ENST00000472776 KIF27Q86VH2 1401 aa25.68■■□□□ 1.7
CLASP1-210ENST00000472776 IFT140Q96RY7 1462 aa25.67■■□□□ 1.7
CLASP1-210ENST00000472776 EEA1Q15075 1411 aa25.66■■□□□ 1.7
CLASP1-210ENST00000472776 TDRD9Q8NDG6 1382 aaKnown RBP25.63■■□□□ 1.69
CLASP1-210ENST00000472776 ZNF608Q9ULD9 1512 aaPredicted RBP25.61■■□□□ 1.69
CLASP1-210ENST00000472776 ABCA5Q8WWZ7 1642 aa25.6■■□□□ 1.69
CLASP1-210ENST00000472776 CSRNP3Q8WYN3 585 aa25.6■■□□□ 1.69
CLASP1-210ENST00000472776 AQRO60306 1485 aaKnown RBP eCLIP25.55■■□□□ 1.682e-6■■■□□ 18.3
CLASP1-210ENST00000472776 GAPVD1Q14C86 1478 aa25.54■■□□□ 1.68
CLASP1-210ENST00000472776 LOC105371045A0A1W2PR82 267 aa25.53■■□□□ 1.68
CLASP1-210ENST00000472776 IGF1RP08069 1367 aa25.52■■□□□ 1.68
CLASP1-210ENST00000472776 EHMT2Q96KQ7 1210 aa25.51■■□□□ 1.67
CLASP1-210ENST00000472776 EIF4G3O43432 1585 aaKnown RBP25.5■■□□□ 1.67
CLASP1-210ENST00000472776 PBRM1Q86U86 1689 aa25.46■■□□□ 1.67
CLASP1-210ENST00000472776 PRXQ9BXM0 1461 aa25.44■■□□□ 1.66
CLASP1-210ENST00000472776 ERICH3Q5RHP9 1530 aa25.43■■□□□ 1.66
CLASP1-210ENST00000472776 KIF21BO75037 1637 aa25.42■■□□□ 1.66
CLASP1-210ENST00000472776 GRIN2BQ13224 1484 aa25.39■■□□□ 1.66
CLASP1-210ENST00000472776 RAPGEF2Q9Y4G8 1499 aa25.39■■□□□ 1.66
CLASP1-210ENST00000472776 CARMIL1Q5VZK9 1371 aa25.37■■□□□ 1.65
CLASP1-210ENST00000472776 CUL7Q14999 1698 aa25.35■■□□□ 1.65
CLASP1-210ENST00000472776 GOLGA3Q08378 1498 aa25.33■■□□□ 1.65
CLASP1-210ENST00000472776 SNAPC4Q5SXM2 1469 aa25.31■■□□□ 1.64
CLASP1-210ENST00000472776 ADAMTS12P58397 1594 aa25.29■■□□□ 1.64
CLASP1-210ENST00000472776 FHAD1B1AJZ9 1412 aa25.24■■□□□ 1.63
CLASP1-210ENST00000472776 MAGI1Q96QZ7 1491 aaPredicted RBP25.22■■□□□ 1.63
CLASP1-210ENST00000472776 UBTFP17480 764 aaKnown RBP25.22■■□□□ 1.63
CLASP1-210ENST00000472776 TNIKQ9UKE5 1360 aa25.16■■□□□ 1.62
CLASP1-210ENST00000472776 SYNJ2O15056 1496 aa25.14■■□□□ 1.61
CLASP1-210ENST00000472776 GRIN2AQ12879 1464 aa25.1■■□□□ 1.61
CLASP1-210ENST00000472776 CHMP7Q8WUX9 453 aaPredicted RBP25.07■■□□□ 1.6
CLASP1-210ENST00000472776 FBLN2P98095 1184 aa25.06■■□□□ 1.6
CLASP1-210ENST00000472776 CHD1O14646 1710 aa25.05■■□□□ 1.6
CLASP1-210ENST00000472776 CTTNBP2Q8WZ74 1663 aa25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms